RNA–Protein interactions for RNA: ENST00000524157.2

SPIDR-226, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 267 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-226ENST00000524157 LDLRAD1Q5T700 205 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 DPH6Q7L8W6 267 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 TMC4Q7Z404 712 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 SLC43A3Q8NBI5 491 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 SERBP1Q8NC51 408 aaKnown RBP eCLIP8□□□□□ -1.13
SPIDR-226ENST00000524157 GAS2L2Q8NHY3 880 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 RNF34Q969K3 372 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 PRDM9Q9NQV7 894 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 ZNF358Q9NW07 568 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 PARP2Q9UGN5 583 aa8□□□□□ -1.13
SPIDR-226ENST00000524157 MAPK8P45983 427 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 DSC3Q14574 896 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 THSD4Q6ZMP0 1018 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 METTL16Q86W50 562 aaKnown RBP7.99□□□□□ -1.13
SPIDR-226ENST00000524157 ANKRD13AQ8IZ07 590 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 CCDC24Q8N4L8 307 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 TINF2Q9BSI4 451 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 CCSER2Q9H7U1 834 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 CUEDC1Q9NWM3 386 aaPredicted RBP7.99□□□□□ -1.13
SPIDR-226ENST00000524157 NLRP2Q9NX02 1062 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 WBP1LQ9NX94 342 aa7.99□□□□□ -1.13
SPIDR-226ENST00000524157 BACH1O14867 736 aa7.98□□□□□ -1.13
SPIDR-226ENST00000524157 ADH1BP00325 375 aa7.98□□□□□ -1.13
SPIDR-226ENST00000524157 DAB2P98082 770 aa7.98□□□□□ -1.13
SPIDR-226ENST00000524157 EHHADHQ08426 723 aa7.98□□□□□ -1.13
SPIDR-226ENST00000524157 PDE3BQ13370 1112 aa7.98□□□□□ -1.13
SPIDR-226ENST00000524157 C16orf46Q6P387 395 aa7.98□□□□□ -1.13
SPIDR-226ENST00000524157 NOP9Q86U38 636 aaKnown RBP7.98□□□□□ -1.13
SPIDR-226ENST00000524157 ARMC5Q96C12 935 aa7.98□□□□□ -1.13
SPIDR-226ENST00000524157 DUSP9Q99956 384 aaKnown RBP7.98□□□□□ -1.13
SPIDR-226ENST00000524157 VTI1BQ9UEU0 232 aa7.98□□□□□ -1.13
SPIDR-226ENST00000524157 ZPR1O75312 459 aa7.97□□□□□ -1.13
SPIDR-226ENST00000524157 FANCCQ00597 558 aa7.97□□□□□ -1.13
SPIDR-226ENST00000524157 PSMD2Q13200 908 aa7.97□□□□□ -1.13
SPIDR-226ENST00000524157 GNL2Q13823 731 aaKnown RBP7.97□□□□□ -1.13
SPIDR-226ENST00000524157 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-226ENST00000524157 PTCRAQ6ISU1 281 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-226ENST00000524157 SCG3Q8WXD2 468 aaKnown RBP7.97□□□□□ -1.13
SPIDR-226ENST00000524157 ALKBH8Q96BT7 664 aaKnown RBP7.97□□□□□ -1.13
SPIDR-226ENST00000524157 ANKRD62A6NC57 917 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 ATP2B1P20020 1258 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 ZNF76P36508 570 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 EIF1AXP47813 144 aaKnown RBP7.96□□□□□ -1.14
SPIDR-226ENST00000524157 AAMPQ13685 434 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 GIMAP6Q6P9H5 292 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 TRMT44Q8IYL2 757 aaKnown RBP7.96□□□□□ -1.14
SPIDR-226ENST00000524157 TRIM52Q96A61 297 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 FAM161BQ96MY7 647 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 C1QTNF2Q9BXJ5 285 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 ESF1Q9H501 851 aaKnown RBP7.96□□□□□ -1.14
SPIDR-226ENST00000524157 PRKAG2Q9UGJ0 569 aa7.96□□□□□ -1.14
SPIDR-226ENST00000524157 WASLO00401 505 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-226ENST00000524157 ZNF511Q8NB15 262 aa7.95□□□□□ -1.14
SPIDR-226ENST00000524157 BAP1Q92560 729 aa7.95□□□□□ -1.14
SPIDR-226ENST00000524157 FOXJ1Q92949 421 aa7.95□□□□□ -1.14
SPIDR-226ENST00000524157 FAM129BQ96TA1 746 aa7.95□□□□□ -1.14
SPIDR-226ENST00000524157 HIRIP3Q9BW71 556 aaPredicted RBP7.95□□□□□ -1.14
SPIDR-226ENST00000524157 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
SPIDR-226ENST00000524157 ATAD2Q6PL18 1390 aa7.95□□□□□ -1.14
SPIDR-226ENST00000524157 TMEM229AB2RXF0 380 aa7.94□□□□□ -1.14
SPIDR-226ENST00000524157 FZD6O60353 706 aa7.94□□□□□ -1.14
SPIDR-226ENST00000524157 ALG1LQ6GMV1 187 aa7.94□□□□□ -1.14
SPIDR-226ENST00000524157 DNAJC2Q99543 621 aaKnown RBP7.94□□□□□ -1.14
SPIDR-226ENST00000524157 IL21Q9HBE4 155 aa7.94□□□□□ -1.14
SPIDR-226ENST00000524157 STIM2Q9P246 746 aa7.94□□□□□ -1.14
SPIDR-226ENST00000524157 TMA7Q9Y2S6 64 aaKnown RBP7.94□□□□□ -1.14
SPIDR-226ENST00000524157 C4orf48Q5BLP8 95 aa7.93□□□□□ -1.14
SPIDR-226ENST00000524157 ABTB2Q8N961 1025 aa7.93□□□□□ -1.14
SPIDR-226ENST00000524157 LNPKQ9C0E8 428 aa7.93□□□□□ -1.14
SPIDR-226ENST00000524157 CCDC87Q9NVE4 849 aa7.93□□□□□ -1.14
SPIDR-226ENST00000524157 IGHA2P01877 340 aa7.92□□□□□ -1.14
SPIDR-226ENST00000524157 GDF10P55107 478 aa7.92□□□□□ -1.14
SPIDR-226ENST00000524157 LINC01559Q495D7 138 aa7.92□□□□□ -1.14
SPIDR-226ENST00000524157 TNS4Q8IZW8 715 aa7.92□□□□□ -1.14
SPIDR-226ENST00000524157 STAG2Q8N3U4 1231 aa7.92□□□□□ -1.14
SPIDR-226ENST00000524157 CHMP7Q8WUX9 453 aaPredicted RBP7.92□□□□□ -1.14
SPIDR-226ENST00000524157 SAP130Q9H0E3 1048 aa7.92□□□□□ -1.14
SPIDR-226ENST00000524157 GPR182O15218 404 aa7.91□□□□□ -1.14
SPIDR-226ENST00000524157 GTF2F1P35269 517 aaKnown RBP eCLIP7.91□□□□□ -1.14
SPIDR-226ENST00000524157 COPS2P61201 443 aa7.91□□□□□ -1.14
SPIDR-226ENST00000524157 KCTD15Q96SI1 283 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-226ENST00000524157 GMLQ99445 158 aa7.91□□□□□ -1.14
SPIDR-226ENST00000524157 TSPAN10Q9H1Z9 355 aaPredicted RBP7.91□□□□□ -1.14
SPIDR-226ENST00000524157 PPP1R12BO60237 982 aaPredicted RBP7.9□□□□□ -1.14
SPIDR-226ENST00000524157 SCNN1DP51172 638 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 EPHA4P54764 986 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 RAB15P59190 212 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 ERVK-9P63128 1117 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 ENOX2Q16206 610 aaKnown RBP7.9□□□□□ -1.14
SPIDR-226ENST00000524157 CC2D2BQ6DHV5 1058 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 DHX38Q92620 1227 aaKnown RBP7.9□□□□□ -1.14
SPIDR-226ENST00000524157 MTRQ99707 1265 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 SLC6A16Q9GZN6 736 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 ACBD3Q9H3P7 528 aa7.9□□□□□ -1.14
SPIDR-226ENST00000524157 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.9□□□□□ -1.14
SPIDR-226ENST00000524157 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
SPIDR-226ENST00000524157 TNFRSF10BO14763 440 aa7.89□□□□□ -1.15
SPIDR-226ENST00000524157 TLL1O43897 1013 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms