RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 PTMSP20962 102 aa13.94□□□□□ -0.18
TNPO1-213ENST00000523768 ATP8B2P98198 1209 aa13.94□□□□□ -0.18
TNPO1-213ENST00000523768 IP6K1Q92551 441 aa13.94□□□□□ -0.18
TNPO1-213ENST00000523768 REC8O95072 547 aa13.94□□□□□ -0.18
TNPO1-213ENST00000523768 CLEC17AQ6ZS10 378 aa13.94□□□□□ -0.18
TNPO1-213ENST00000523768 CEMIPQ8WUJ3 1361 aa13.94□□□□□ -0.18
TNPO1-213ENST00000523768 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
TNPO1-213ENST00000523768 NFAT5O94916 1531 aa13.93□□□□□ -0.18
TNPO1-213ENST00000523768 ERC2O15083 957 aa13.93□□□□□ -0.18
TNPO1-213ENST00000523768 LRRCC1Q9C099 1032 aa13.93□□□□□ -0.18
TNPO1-213ENST00000523768 LTN1O94822 1766 aa13.92□□□□□ -0.18
TNPO1-213ENST00000523768 SKOR2Q2VWA4 1001 aaPredicted RBP13.92□□□□□ -0.18
TNPO1-213ENST00000523768 ANKLE2Q86XL3 938 aa13.92□□□□□ -0.18
TNPO1-213ENST00000523768 GZF1Q9H116 711 aaPredicted RBP13.92□□□□□ -0.18
TNPO1-213ENST00000523768 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
TNPO1-213ENST00000523768 MED1Q15648 1581 aaPredicted RBP13.92□□□□□ -0.18
TNPO1-213ENST00000523768 IBTKQ9P2D0 1353 aaPredicted RBP13.92□□□□□ -0.18
TNPO1-213ENST00000523768 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
TNPO1-213ENST00000523768 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
TNPO1-213ENST00000523768 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
TNPO1-213ENST00000523768 FOXD4L1Q9NU39 408 aa13.91□□□□□ -0.18
TNPO1-213ENST00000523768 NECTIN2Q92692 538 aa13.91□□□□□ -0.18
TNPO1-213ENST00000523768 USP44Q9H0E7 712 aa13.91□□□□□ -0.18
TNPO1-213ENST00000523768 PHRF1Q9P1Y6 1649 aaKnown RBP13.9□□□□□ -0.18
TNPO1-213ENST00000523768 HOXB7P09629 217 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 HDGFL1Q5TGJ6 251 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 C14orf37Q86TY3 774 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 USHBP1Q8N6Y0 703 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 KCNH5Q8NCM2 988 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 ADGRL3Q9HAR2 1447 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 CHMP4AQ9BY43 222 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 STAP2Q9UGK3 403 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 TUBGCP6Q96RT7 1819 aa13.9□□□□□ -0.18
TNPO1-213ENST00000523768 ST18O60284 1047 aa13.89□□□□□ -0.19
TNPO1-213ENST00000523768 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
TNPO1-213ENST00000523768 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
TNPO1-213ENST00000523768 LRRFIP2Q9Y608 721 aaKnown RBP13.89□□□□□ -0.19
TNPO1-213ENST00000523768 ZNF142P52746 1687 aaPredicted RBP13.89□□□□□ -0.19
TNPO1-213ENST00000523768 MX1P20591 662 aa13.89□□□□□ -0.19
TNPO1-213ENST00000523768 SSFA2P28290 1259 aa13.89□□□□□ -0.19
TNPO1-213ENST00000523768 MRE11P49959 708 aa13.89□□□□□ -0.19
TNPO1-213ENST00000523768 SRCIN1Q9C0H9 1055 aa13.89□□□□□ -0.19
TNPO1-213ENST00000523768 UBTFL1P0CB47 393 aaPredicted RBP13.88□□□□□ -0.19
TNPO1-213ENST00000523768 EIF4A1P60842 406 aaKnown RBP13.88□□□□□ -0.19
TNPO1-213ENST00000523768 NUCB2P80303 420 aa13.88□□□□□ -0.19
TNPO1-213ENST00000523768 SSH3Q8TE77 659 aa13.88□□□□□ -0.19
TNPO1-213ENST00000523768 CWC22Q9HCG8 908 aaKnown RBP13.88□□□□□ -0.19
TNPO1-213ENST00000523768 AOX1Q06278 1338 aa13.88□□□□□ -0.19
TNPO1-213ENST00000523768 PSME1Q06323 249 aa13.87□□□□□ -0.19
TNPO1-213ENST00000523768 KDM3BQ7LBC6 1761 aa13.87□□□□□ -0.19
TNPO1-213ENST00000523768 PHAXQ9H814 394 aaKnown RBP13.87□□□□□ -0.19
TNPO1-213ENST00000523768 CYP2E1P05181 493 aaPredicted RBP13.87□□□□□ -0.19
TNPO1-213ENST00000523768 ESYT1Q9BSJ8 1104 aa13.87□□□□□ -0.19
TNPO1-213ENST00000523768 GOLGA6L22H0YM25 854 aa13.86□□□□□ -0.19
TNPO1-213ENST00000523768 LMO7Q8WWI1 1683 aa13.86□□□□□ -0.19
TNPO1-213ENST00000523768 NCAPD2Q15021 1401 aa13.86□□□□□ -0.19
TNPO1-213ENST00000523768 RAB11FIP3O75154 756 aa13.86□□□□□ -0.19
TNPO1-213ENST00000523768 BAG4O95429 457 aaKnown RBP13.86□□□□□ -0.19
TNPO1-213ENST00000523768 POLA2Q14181 598 aa13.86□□□□□ -0.19
TNPO1-213ENST00000523768 ESCO1Q5FWF5 840 aa13.86□□□□□ -0.19
TNPO1-213ENST00000523768 AKAP4Q5JQC9 854 aa13.86□□□□□ -0.19
TNPO1-213ENST00000523768 LGR6Q9HBX8 967 aa13.86□□□□□ -0.19
TNPO1-213ENST00000523768 CHMLP26374 656 aa13.85□□□□□ -0.19
TNPO1-213ENST00000523768 PLEKHO1Q53GL0 409 aaPredicted RBP13.84□□□□□ -0.19
TNPO1-213ENST00000523768 TSHZ3Q63HK5 1081 aa13.84□□□□□ -0.19
TNPO1-213ENST00000523768 IL17RAQ96F46 866 aa13.84□□□□□ -0.19
TNPO1-213ENST00000523768 GRPEL1Q9HAV7 217 aa13.84□□□□□ -0.19
TNPO1-213ENST00000523768 EPB41L2O43491 1005 aaKnown RBP13.84□□□□□ -0.19
TNPO1-213ENST00000523768 ANAPC15P60006 121 aa13.84□□□□□ -0.19
TNPO1-213ENST00000523768 AMOTQ4VCS5 1084 aa13.84□□□□□ -0.19
TNPO1-213ENST00000523768 SLIT3O75094 1523 aa13.84□□□□□ -0.19
TNPO1-213ENST00000523768 EIF2S2P20042 333 aaKnown RBP13.83□□□□□ -0.19
TNPO1-213ENST00000523768 BEND3Q5T5X7 828 aa13.83□□□□□ -0.19
TNPO1-213ENST00000523768 ARHGEF25Q86VW2 580 aa13.83□□□□□ -0.19
TNPO1-213ENST00000523768 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.19
TNPO1-213ENST00000523768 OVOS2A0A0G2JMS6 1433 aa13.83□□□□□ -0.2
TNPO1-213ENST00000523768 MCM2P49736 904 aa13.83□□□□□ -0.2
TNPO1-213ENST00000523768 TEFQ10587 303 aa13.83□□□□□ -0.2
TNPO1-213ENST00000523768 ZNF530Q6P9A1 599 aaPredicted RBP13.83□□□□□ -0.2
TNPO1-213ENST00000523768 PPP1R42Q7Z4L9 355 aa13.83□□□□□ -0.2
TNPO1-213ENST00000523768 DNAAF4Q8WXU2 420 aa13.83□□□□□ -0.2
TNPO1-213ENST00000523768 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
TNPO1-213ENST00000523768 CHPF2Q9P2E5 772 aa13.83□□□□□ -0.2
TNPO1-213ENST00000523768 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.2
TNPO1-213ENST00000523768 GCP02774 474 aa13.82□□□□□ -0.2
TNPO1-213ENST00000523768 MCCP23508 829 aa13.82□□□□□ -0.2
TNPO1-213ENST00000523768 KLHL40Q2TBA0 621 aa13.82□□□□□ -0.2
TNPO1-213ENST00000523768 ARXQ96QS3 562 aa13.82□□□□□ -0.2
TNPO1-213ENST00000523768 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
TNPO1-213ENST00000523768 TRIM6-TRIM34B2RNG4 842 aa13.82□□□□□ -0.2
TNPO1-213ENST00000523768 RILPL2Q969X0 211 aa13.82□□□□□ -0.2
TNPO1-213ENST00000523768 LRRC59Q96AG4 307 aaKnown RBP13.82□□□□□ -0.2
TNPO1-213ENST00000523768 KCNQ3O43525 872 aa13.81□□□□□ -0.2
TNPO1-213ENST00000523768 PI4KAP2A4QPH2 592 aa13.81□□□□□ -0.2
TNPO1-213ENST00000523768 RNMTO43148 476 aaKnown RBP13.81□□□□□ -0.2
TNPO1-213ENST00000523768 ZGPATQ8N5A5 531 aaKnown RBP13.81□□□□□ -0.2
TNPO1-213ENST00000523768 PI4KAP1Q8N8J0 262 aa13.81□□□□□ -0.2
TNPO1-213ENST00000523768 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
TNPO1-213ENST00000523768 SETD1BQ9UPS6 1966 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms