RNA–Protein interactions for RNA: ENST00000523464.1

EBF1-210, Transcript of early B cell factor 1, humanhuman

TSL 3

Gene EBF1, Length 766 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-210ENST00000523464 PPM1GO15355 546 aaPredicted RBP12.98□□□□□ -0.33
EBF1-210ENST00000523464 GPBP1L1Q9HC44 474 aaPredicted RBP12.98□□□□□ -0.33
EBF1-210ENST00000523464 CEP350Q5VT06 3117 aa12.98□□□□□ -0.33
EBF1-210ENST00000523464 MAP2P11137 1827 aaKnown RBP12.97□□□□□ -0.33
EBF1-210ENST00000523464 PHKG2P15735 406 aa12.97□□□□□ -0.33
EBF1-210ENST00000523464 RC3H1Q5TC82 1133 aaKnown RBP12.97□□□□□ -0.33
EBF1-210ENST00000523464 NLGN1Q8N2Q7 840 aa12.97□□□□□ -0.33
EBF1-210ENST00000523464 POLKQ9UBT6 870 aa12.97□□□□□ -0.33
EBF1-210ENST00000523464 ATP6V1AP38606 617 aa12.96□□□□□ -0.33
EBF1-210ENST00000523464 DCAF5Q96JK2 942 aa12.96□□□□□ -0.33
EBF1-210ENST00000523464 TOGARAM1Q9Y4F4 1720 aa12.96□□□□□ -0.34
EBF1-210ENST00000523464 ATP10DQ9P241 1426 aa12.96□□□□□ -0.34
EBF1-210ENST00000523464 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.34
EBF1-210ENST00000523464 ADCY9O60503 1353 aa12.95□□□□□ -0.34
EBF1-210ENST00000523464 IGSF1Q8N6C5 1336 aa12.95□□□□□ -0.34
EBF1-210ENST00000523464 TGFB2P61812 414 aa12.95□□□□□ -0.34
EBF1-210ENST00000523464 AMOTQ4VCS5 1084 aa12.95□□□□□ -0.34
EBF1-210ENST00000523464 TRAPPC3LQ5T215 181 aa12.95□□□□□ -0.34
EBF1-210ENST00000523464 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
EBF1-210ENST00000523464 ASAP1Q9ULH1 1129 aa12.95□□□□□ -0.34
EBF1-210ENST00000523464 GNPATO15228 680 aa12.94□□□□□ -0.34
EBF1-210ENST00000523464 PLEKHO1Q53GL0 409 aaPredicted RBP12.94□□□□□ -0.34
EBF1-210ENST00000523464 ATG3Q9NT62 314 aa12.94□□□□□ -0.34
EBF1-210ENST00000523464 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
EBF1-210ENST00000523464 PHF14O94880 888 aa12.93□□□□□ -0.34
EBF1-210ENST00000523464 HSPA6P17066 643 aa12.92□□□□□ -0.34
EBF1-210ENST00000523464 ITPK1Q13572 414 aa12.92□□□□□ -0.34
EBF1-210ENST00000523464 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
EBF1-210ENST00000523464 AMIGO3Q86WK7 504 aa12.92□□□□□ -0.34
EBF1-210ENST00000523464 CNTNAP4Q9C0A0 1308 aa12.91□□□□□ -0.34
EBF1-210ENST00000523464 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
EBF1-210ENST00000523464 MMP10P09238 476 aa12.91□□□□□ -0.34
EBF1-210ENST00000523464 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
EBF1-210ENST00000523464 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
EBF1-210ENST00000523464 CCDC87Q9NVE4 849 aa12.9□□□□□ -0.34
EBF1-210ENST00000523464 KDRP35968 1356 aa12.9□□□□□ -0.34
EBF1-210ENST00000523464 CICQ96RK0 1608 aaPredicted RBP12.89□□□□□ -0.35
EBF1-210ENST00000523464 RFC4P35249 363 aa12.89□□□□□ -0.35
EBF1-210ENST00000523464 EIF4G2P78344 907 aaKnown RBP eCLIP12.89□□□□□ -0.35
EBF1-210ENST00000523464 CABP4P57796 275 aa12.88□□□□□ -0.35
EBF1-210ENST00000523464 C1orf141Q5JVX7 400 aa12.88□□□□□ -0.35
EBF1-210ENST00000523464 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
EBF1-210ENST00000523464 ARHGEF1Q92888 912 aaKnown RBP12.88□□□□□ -0.35
EBF1-210ENST00000523464 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
EBF1-210ENST00000523464 GYS1P13807 737 aa12.87□□□□□ -0.35
EBF1-210ENST00000523464 MTHFSP49914 203 aa12.87□□□□□ -0.35
EBF1-210ENST00000523464 RBM42Q9BTD8 480 aaKnown RBP12.87□□□□□ -0.35
EBF1-210ENST00000523464 PXDNLA1KZ92 1463 aa12.86□□□□□ -0.35
EBF1-210ENST00000523464 TOMM70O94826 608 aa12.86□□□□□ -0.35
EBF1-210ENST00000523464 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
EBF1-210ENST00000523464 SLC4A9Q96Q91 983 aa12.86□□□□□ -0.35
EBF1-210ENST00000523464 PANK3Q9H999 370 aa12.86□□□□□ -0.35
EBF1-210ENST00000523464 C10orf71Q711Q0 1435 aa12.86□□□□□ -0.35
EBF1-210ENST00000523464 KIF3CO14782 793 aa12.85□□□□□ -0.35
EBF1-210ENST00000523464 TNNT2P45379 298 aaPredicted RBP12.85□□□□□ -0.35
EBF1-210ENST00000523464 APLP1P51693 650 aa12.85□□□□□ -0.35
EBF1-210ENST00000523464 SMIM5Q71RC9 77 aa12.85□□□□□ -0.35
EBF1-210ENST00000523464 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
EBF1-210ENST00000523464 BCS1LQ9Y276 419 aa12.85□□□□□ -0.35
EBF1-210ENST00000523464 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
EBF1-210ENST00000523464 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
EBF1-210ENST00000523464 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
EBF1-210ENST00000523464 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
EBF1-210ENST00000523464 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
EBF1-210ENST00000523464 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
EBF1-210ENST00000523464 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
EBF1-210ENST00000523464 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.36
EBF1-210ENST00000523464 KNSTRNQ9Y448 316 aa12.83□□□□□ -0.36
EBF1-210ENST00000523464 MYH14Q7Z406 1995 aaKnown RBP12.82□□□□□ -0.36
EBF1-210ENST00000523464 FCHSD2O94868 740 aa12.82□□□□□ -0.36
EBF1-210ENST00000523464 DPEP1P16444 411 aa12.82□□□□□ -0.36
EBF1-210ENST00000523464 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
EBF1-210ENST00000523464 AKAP4Q5JQC9 854 aa12.82□□□□□ -0.36
EBF1-210ENST00000523464 POLR3GLQ9BT43 218 aa12.82□□□□□ -0.36
EBF1-210ENST00000523464 KIAA1551Q9HCM1 1747 aa12.82□□□□□ -0.36
EBF1-210ENST00000523464 KCNA3P22001 575 aa12.81□□□□□ -0.36
EBF1-210ENST00000523464 DALRD3Q5D0E6 543 aaKnown RBP12.81□□□□□ -0.36
EBF1-210ENST00000523464 SULT6B1Q6IMI4 303 aa12.81□□□□□ -0.36
EBF1-210ENST00000523464 USP42Q9H9J4 1324 aaKnown RBP12.81□□□□□ -0.36
EBF1-210ENST00000523464 ARFGEF1Q9Y6D6 1849 aa12.81□□□□□ -0.36
EBF1-210ENST00000523464 N4BP2Q86UW6 1770 aaPredicted RBP12.8□□□□□ -0.36
EBF1-210ENST00000523464 PTCD1O75127 700 aaKnown RBP12.8□□□□□ -0.36
EBF1-210ENST00000523464 ZPR1O75312 459 aa12.8□□□□□ -0.36
EBF1-210ENST00000523464 HSPA5P11021 654 aaKnown RBP12.8□□□□□ -0.36
EBF1-210ENST00000523464 IL13P35225 146 aa12.8□□□□□ -0.36
EBF1-210ENST00000523464 RBM46Q8TBY0 533 aaKnown RBP12.8□□□□□ -0.36
EBF1-210ENST00000523464 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
EBF1-210ENST00000523464 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
EBF1-210ENST00000523464 BRCA1P38398 1863 aaKnown RBP12.8□□□□□ -0.36
EBF1-210ENST00000523464 TM4SF1P30408 202 aa12.79□□□□□ -0.36
EBF1-210ENST00000523464 FSTL1Q12841 308 aa12.79□□□□□ -0.36
EBF1-210ENST00000523464 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
EBF1-210ENST00000523464 INTS5Q6P9B9 1019 aaKnown RBP12.78□□□□□ -0.36
EBF1-210ENST00000523464 C16orf71Q8IYS4 520 aaPredicted RBP12.78□□□□□ -0.36
EBF1-210ENST00000523464 SLC52A2Q9HAB3 445 aa12.78□□□□□ -0.36
EBF1-210ENST00000523464 WWC3Q9ULE0 1092 aa12.78□□□□□ -0.36
EBF1-210ENST00000523464 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
EBF1-210ENST00000523464 FKBP8Q14318 412 aa12.77□□□□□ -0.37
EBF1-210ENST00000523464 C9orf131Q5VYM1 1079 aa12.77□□□□□ -0.37
EBF1-210ENST00000523464 AEBP1Q8IUX7 1158 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms