RNA–Protein interactions for RNA: ENST00000523296.1

SFTPC-209, Transcript of surfactant protein C, humanhuman

TSL 3

Gene SFTPC, Length 395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPC-209ENST00000523296 RC3H1Q5TC82 1133 aaKnown RBP20.73■□□□□ 0.91
SFTPC-209ENST00000523296 ZNF530Q6P9A1 599 aaPredicted RBP20.73■□□□□ 0.91
SFTPC-209ENST00000523296 KLHL34Q8N239 644 aa20.73■□□□□ 0.91
SFTPC-209ENST00000523296 ATG3Q9NT62 314 aa20.73■□□□□ 0.91
SFTPC-209ENST00000523296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.72■□□□□ 0.91
SFTPC-209ENST00000523296 ADRA2BP18089 450 aa20.72■□□□□ 0.91
SFTPC-209ENST00000523296 CABP4P57796 275 aa20.72■□□□□ 0.91
SFTPC-209ENST00000523296 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
SFTPC-209ENST00000523296 IL13P35225 146 aa20.71■□□□□ 0.91
SFTPC-209ENST00000523296 SULT6B1Q6IMI4 303 aa20.71■□□□□ 0.91
SFTPC-209ENST00000523296 PER1O15534 1290 aaPredicted RBP20.7■□□□□ 0.9
SFTPC-209ENST00000523296 ZNF784Q8NCA9 323 aaPredicted RBP20.69■□□□□ 0.9
SFTPC-209ENST00000523296 LINC00116Q8NCU8 138 aa20.69■□□□□ 0.9
SFTPC-209ENST00000523296 RTCBQ9Y3I0 505 aaKnown RBP20.69■□□□□ 0.9
SFTPC-209ENST00000523296 GNPATO15228 680 aa20.68■□□□□ 0.9
SFTPC-209ENST00000523296 AKAP4Q5JQC9 854 aa20.68■□□□□ 0.9
SFTPC-209ENST00000523296 TRAPPC3LQ5T215 181 aa20.68■□□□□ 0.9
SFTPC-209ENST00000523296 NLGN1Q8N2Q7 840 aa20.67■□□□□ 0.9
SFTPC-209ENST00000523296 PHF14O94880 888 aa20.66■□□□□ 0.9
SFTPC-209ENST00000523296 ITPK1Q13572 414 aa20.66■□□□□ 0.9
SFTPC-209ENST00000523296 MSL1Q68DK7 614 aa20.66■□□□□ 0.9
SFTPC-209ENST00000523296 CNTNAP4Q9C0A0 1308 aa20.66■□□□□ 0.9
SFTPC-209ENST00000523296 NLGN2Q8NFZ4 835 aa20.65■□□□□ 0.9
SFTPC-209ENST00000523296 RBM42Q9BTD8 480 aaKnown RBP20.65■□□□□ 0.9
SFTPC-209ENST00000523296 DIAPH1O60610 1272 aaKnown RBP20.64■□□□□ 0.89
SFTPC-209ENST00000523296 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.89
SFTPC-209ENST00000523296 KDM6AO15550 1401 aaPredicted RBP20.63■□□□□ 0.89
SFTPC-209ENST00000523296 RPS6KA4O75676 772 aa20.63■□□□□ 0.89
SFTPC-209ENST00000523296 AEBP1Q8IUX7 1158 aa20.63■□□□□ 0.89
SFTPC-209ENST00000523296 NFATC2IPQ8NCF5 419 aa20.63■□□□□ 0.89
SFTPC-209ENST00000523296 SCN11AQ9UI33 1791 aa20.62■□□□□ 0.89
SFTPC-209ENST00000523296 RFC4P35249 363 aa20.61■□□□□ 0.89
SFTPC-209ENST00000523296 COL5A3P25940 1745 aaPredicted RBP20.6■□□□□ 0.89
SFTPC-209ENST00000523296 CICQ96RK0 1608 aaPredicted RBP20.6■□□□□ 0.89
SFTPC-209ENST00000523296 TGFB2P61812 414 aa20.59■□□□□ 0.89
SFTPC-209ENST00000523296 AMIGO3Q86WK7 504 aa20.59■□□□□ 0.89
SFTPC-209ENST00000523296 SLC52A2Q9HAB3 445 aa20.59■□□□□ 0.89
SFTPC-209ENST00000523296 CC2D1BQ5T0F9 858 aaKnown RBP20.58■□□□□ 0.89
SFTPC-209ENST00000523296 ARHGEF1Q92888 912 aaKnown RBP20.58■□□□□ 0.89
SFTPC-209ENST00000523296 SLC4A9Q96Q91 983 aa20.58■□□□□ 0.89
SFTPC-209ENST00000523296 PTCD1O75127 700 aaKnown RBP20.57■□□□□ 0.88
SFTPC-209ENST00000523296 YBX3P16989 372 aaKnown RBP eCLIP20.57■□□□□ 0.88
SFTPC-209ENST00000523296 MMP10P09238 476 aa20.56■□□□□ 0.88
SFTPC-209ENST00000523296 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
SFTPC-209ENST00000523296 CFAP53Q96M91 514 aa20.55■□□□□ 0.88
SFTPC-209ENST00000523296 CCDC87Q9NVE4 849 aa20.55■□□□□ 0.88
SFTPC-209ENST00000523296 PARP3Q9Y6F1 533 aa20.55■□□□□ 0.88
SFTPC-209ENST00000523296 RNMTO43148 476 aaKnown RBP20.54■□□□□ 0.88
SFTPC-209ENST00000523296 CRKLP46109 303 aaKnown RBP20.54■□□□□ 0.88
SFTPC-209ENST00000523296 GAS2L2Q8NHY3 880 aa20.54■□□□□ 0.88
SFTPC-209ENST00000523296 MRC1P22897 1456 aa20.54■□□□□ 0.88
SFTPC-209ENST00000523296 KIF13BQ9NQT8 1826 aa20.53■□□□□ 0.88
SFTPC-209ENST00000523296 HMOX1P09601 288 aa20.53■□□□□ 0.88
SFTPC-209ENST00000523296 GYS1P13807 737 aa20.53■□□□□ 0.88
SFTPC-209ENST00000523296 NUDCQ9Y266 331 aa20.52■□□□□ 0.88
SFTPC-209ENST00000523296 MYH14Q7Z406 1995 aaKnown RBP20.52■□□□□ 0.87
SFTPC-209ENST00000523296 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
SFTPC-209ENST00000523296 MTHFSDQ2M296 383 aaKnown RBP20.51■□□□□ 0.87
SFTPC-209ENST00000523296 ADAMTS7Q9UKP4 1686 aa20.51■□□□□ 0.87
SFTPC-209ENST00000523296 C1QTNF8P60827 252 aa20.5■□□□□ 0.87
SFTPC-209ENST00000523296 TEX13AQ9BXU3 409 aaPredicted RBP20.5■□□□□ 0.87
SFTPC-209ENST00000523296 LGR6Q9HBX8 967 aa20.5■□□□□ 0.87
SFTPC-209ENST00000523296 VIRMAQ69YN4 1812 aaKnown RBP20.49■□□□□ 0.87
SFTPC-209ENST00000523296 GNAT3A8MTJ3 354 aa20.49■□□□□ 0.87
SFTPC-209ENST00000523296 ZPR1O75312 459 aa20.49■□□□□ 0.87
SFTPC-209ENST00000523296 SMIM5Q71RC9 77 aa20.49■□□□□ 0.87
SFTPC-209ENST00000523296 TTC5Q8N0Z6 440 aa20.49■□□□□ 0.87
SFTPC-209ENST00000523296 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
SFTPC-209ENST00000523296 STARD3NLO95772 234 aa20.48■□□□□ 0.87
SFTPC-209ENST00000523296 USP42Q9H9J4 1324 aaKnown RBP20.48■□□□□ 0.87
SFTPC-209ENST00000523296 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
SFTPC-209ENST00000523296 C10orf71Q711Q0 1435 aa20.47■□□□□ 0.87
SFTPC-209ENST00000523296 TEFQ10587 303 aa20.47■□□□□ 0.87
SFTPC-209ENST00000523296 INTS5Q6P9B9 1019 aaKnown RBP20.47■□□□□ 0.87
SFTPC-209ENST00000523296 TJP1Q07157 1748 aa20.47■□□□□ 0.87
SFTPC-209ENST00000523296 COL3A1P02461 1466 aaPredicted RBP20.46■□□□□ 0.87
SFTPC-209ENST00000523296 CYP19A1P11511 503 aaPredicted RBP20.46■□□□□ 0.87
SFTPC-209ENST00000523296 A0A087WZG4 1122 aa20.44■□□□□ 0.86
SFTPC-209ENST00000523296 SOS1Q07889 1333 aaPredicted RBP20.44■□□□□ 0.86
SFTPC-209ENST00000523296 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
SFTPC-209ENST00000523296 FCHSD2O94868 740 aa20.43■□□□□ 0.86
SFTPC-209ENST00000523296 DNAJC10Q8IXB1 793 aa20.43■□□□□ 0.86
SFTPC-209ENST00000523296 GPBP1L1Q9HC44 474 aaPredicted RBP20.43■□□□□ 0.86
SFTPC-209ENST00000523296 NARFQ9UHQ1 456 aa20.43■□□□□ 0.86
SFTPC-209ENST00000523296 TM4SF1P30408 202 aa20.42■□□□□ 0.86
SFTPC-209ENST00000523296 ZNF790Q6PG37 636 aa20.42■□□□□ 0.86
SFTPC-209ENST00000523296 PIM2Q9P1W9 311 aa20.42■□□□□ 0.86
SFTPC-209ENST00000523296 ADCY9O60503 1353 aa20.42■□□□□ 0.86
SFTPC-209ENST00000523296 KCPQ6ZWJ8 1503 aa20.42■□□□□ 0.86
SFTPC-209ENST00000523296 UBR2Q8IWV8 1755 aa20.41■□□□□ 0.86
SFTPC-209ENST00000523296 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
SFTPC-209ENST00000523296 ATP10DQ9P241 1426 aa20.41■□□□□ 0.86
SFTPC-209ENST00000523296 HTATSF1O43719 755 aaKnown RBP20.4■□□□□ 0.86
SFTPC-209ENST00000523296 FKBP8Q14318 412 aa20.4■□□□□ 0.86
SFTPC-209ENST00000523296 NPM2Q86SE8 214 aaKnown RBP20.4■□□□□ 0.86
SFTPC-209ENST00000523296 CEMIPQ8WUJ3 1361 aa20.4■□□□□ 0.86
SFTPC-209ENST00000523296 COL15A1P39059 1388 aa20.39■□□□□ 0.85
SFTPC-209ENST00000523296 A0A0G2JLW4 131 aa20.39■□□□□ 0.85
SFTPC-209ENST00000523296 IL17REQ8NFR9 667 aa20.39■□□□□ 0.85
SFTPC-209ENST00000523296 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms