RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
MRPS28-209ENST00000522987 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
MRPS28-209ENST00000522987 COL5A3P25940 1745 aaPredicted RBP21.16■□□□□ 0.98
MRPS28-209ENST00000522987 ZNF530Q6P9A1 599 aaPredicted RBP21.16■□□□□ 0.98
MRPS28-209ENST00000522987 MYH14Q7Z406 1995 aaKnown RBP21.16■□□□□ 0.98
MRPS28-209ENST00000522987 N4BP2Q86UW6 1770 aaPredicted RBP21.15■□□□□ 0.98
MRPS28-209ENST00000522987 C1QTNF8P60827 252 aa21.15■□□□□ 0.98
MRPS28-209ENST00000522987 CD2APQ9Y5K6 639 aa21.15■□□□□ 0.98
MRPS28-209ENST00000522987 GRIN3BO60391 1043 aa21.14■□□□□ 0.97
MRPS28-209ENST00000522987 SSFA2P28290 1259 aa21.14■□□□□ 0.97
MRPS28-209ENST00000522987 KDM6AO15550 1401 aaPredicted RBP21.13■□□□□ 0.97
MRPS28-209ENST00000522987 PLEKHO1Q53GL0 409 aaPredicted RBP21.13■□□□□ 0.97
MRPS28-209ENST00000522987 SLC4A9Q96Q91 983 aa21.13■□□□□ 0.97
MRPS28-209ENST00000522987 GIGYF1O75420 1035 aaPredicted RBP21.12■□□□□ 0.97
MRPS28-209ENST00000522987 HMGB2P26583 209 aaKnown RBP21.12■□□□□ 0.97
MRPS28-209ENST00000522987 SCN11AQ9UI33 1791 aa21.12■□□□□ 0.97
MRPS28-209ENST00000522987 C4AP0C0L4 1744 aa21.12■□□□□ 0.97
MRPS28-209ENST00000522987 KDRP35968 1356 aa21.11■□□□□ 0.97
MRPS28-209ENST00000522987 CABP4P57796 275 aa21.1■□□□□ 0.97
MRPS28-209ENST00000522987 KNSTRNQ9Y448 316 aa21.1■□□□□ 0.97
MRPS28-209ENST00000522987 CICQ96RK0 1608 aaPredicted RBP21.09■□□□□ 0.97
MRPS28-209ENST00000522987 MMP10P09238 476 aa21.09■□□□□ 0.97
MRPS28-209ENST00000522987 SULT6B1Q6IMI4 303 aa21.09■□□□□ 0.97
MRPS28-209ENST00000522987 ZNF526Q8TF50 670 aaPredicted RBP21.09■□□□□ 0.97
MRPS28-209ENST00000522987 DCAF5Q96JK2 942 aa21.09■□□□□ 0.97
MRPS28-209ENST00000522987 ATP10DQ9P241 1426 aa21.09■□□□□ 0.97
MRPS28-209ENST00000522987 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
MRPS28-209ENST00000522987 ZNF831Q5JPB2 1677 aa21.09■□□□□ 0.97
MRPS28-209ENST00000522987 ERVV-2B6SEH9 535 aa21.08■□□□□ 0.97
MRPS28-209ENST00000522987 PTCD1O75127 700 aaKnown RBP21.08■□□□□ 0.97
MRPS28-209ENST00000522987 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.97
MRPS28-209ENST00000522987 RTCBQ9Y3I0 505 aaKnown RBP21.08■□□□□ 0.97
MRPS28-209ENST00000522987 KIF13BQ9NQT8 1826 aa21.08■□□□□ 0.96
MRPS28-209ENST00000522987 TJP1Q07157 1748 aa21.07■□□□□ 0.96
MRPS28-209ENST00000522987 HSP90AB1P08238 724 aaKnown RBP21.07■□□□□ 0.96
MRPS28-209ENST00000522987 MTHFSP49914 203 aa21.07■□□□□ 0.96
MRPS28-209ENST00000522987 C1orf141Q5JVX7 400 aa21.07■□□□□ 0.96
MRPS28-209ENST00000522987 TRAPPC3LQ5T215 181 aa21.06■□□□□ 0.96
MRPS28-209ENST00000522987 AMOTQ4VCS5 1084 aa21.05■□□□□ 0.96
MRPS28-209ENST00000522987 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
MRPS28-209ENST00000522987 ARHGEF1Q92888 912 aaKnown RBP21.05■□□□□ 0.96
MRPS28-209ENST00000522987 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
MRPS28-209ENST00000522987 HMOX1P09601 288 aa21.03■□□□□ 0.96
MRPS28-209ENST00000522987 IL13P35225 146 aa21.03■□□□□ 0.96
MRPS28-209ENST00000522987 PLEKHG2Q9H7P9 1386 aa21.02■□□□□ 0.96
MRPS28-209ENST00000522987 PXDNLA1KZ92 1463 aa21.01■□□□□ 0.95
MRPS28-209ENST00000522987 RFC4P35249 363 aa21.01■□□□□ 0.95
MRPS28-209ENST00000522987 AMER1Q5JTC6 1135 aaPredicted RBP21.01■□□□□ 0.95
MRPS28-209ENST00000522987 CNTNAP4Q9C0A0 1308 aa21.01■□□□□ 0.95
MRPS28-209ENST00000522987 BRCA1P38398 1863 aaKnown RBP21.01■□□□□ 0.95
MRPS28-209ENST00000522987 A0A0G2JLW4 131 aa21■□□□□ 0.95
MRPS28-209ENST00000522987 RPS6KA4O75676 772 aa21■□□□□ 0.95
MRPS28-209ENST00000522987 GYS1P13807 737 aa21■□□□□ 0.95
MRPS28-209ENST00000522987 CC2D1BQ5T0F9 858 aaKnown RBP21■□□□□ 0.95
MRPS28-209ENST00000522987 SRP68Q9UHB9 627 aaKnown RBP21■□□□□ 0.95
MRPS28-209ENST00000522987 CRKLP46109 303 aaKnown RBP20.99■□□□□ 0.95
MRPS28-209ENST00000522987 RC3H1Q5TC82 1133 aaKnown RBP20.99■□□□□ 0.95
MRPS28-209ENST00000522987 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
MRPS28-209ENST00000522987 GPBP1L1Q9HC44 474 aaPredicted RBP20.99■□□□□ 0.95
MRPS28-209ENST00000522987 ADCY9O60503 1353 aa20.98■□□□□ 0.95
MRPS28-209ENST00000522987 NLGN1Q8N2Q7 840 aa20.98■□□□□ 0.95
MRPS28-209ENST00000522987 BCS1LQ9Y276 419 aa20.98■□□□□ 0.95
MRPS28-209ENST00000522987 C10orf71Q711Q0 1435 aa20.96■□□□□ 0.95
MRPS28-209ENST00000522987 SLC39A6Q13433 755 aa20.96■□□□□ 0.95
MRPS28-209ENST00000522987 PARP3Q9Y6F1 533 aa20.96■□□□□ 0.95
MRPS28-209ENST00000522987 DPEP1P16444 411 aa20.95■□□□□ 0.94
MRPS28-209ENST00000522987 ADRA2BP18089 450 aa20.95■□□□□ 0.94
MRPS28-209ENST00000522987 DNAJC10Q8IXB1 793 aa20.95■□□□□ 0.94
MRPS28-209ENST00000522987 CCDC87Q9NVE4 849 aa20.95■□□□□ 0.94
MRPS28-209ENST00000522987 ADAMTS7Q9UKP4 1686 aa20.95■□□□□ 0.94
MRPS28-209ENST00000522987 AKAP4Q5JQC9 854 aa20.94■□□□□ 0.94
MRPS28-209ENST00000522987 AFDNP55196 1824 aaKnown RBP20.93■□□□□ 0.94
MRPS28-209ENST00000522987 ARFGEF1Q9Y6D6 1849 aa20.93■□□□□ 0.94
MRPS28-209ENST00000522987 FKBP8Q14318 412 aa20.93■□□□□ 0.94
MRPS28-209ENST00000522987 SLC52A2Q9HAB3 445 aa20.93■□□□□ 0.94
MRPS28-209ENST00000522987 RNMTO43148 476 aaKnown RBP20.92■□□□□ 0.94
MRPS28-209ENST00000522987 ARHGAP27Q6ZUM4 889 aa20.92■□□□□ 0.94
MRPS28-209ENST00000522987 FCHSD2O94868 740 aa20.91■□□□□ 0.94
MRPS28-209ENST00000522987 TGFB2P61812 414 aa20.91■□□□□ 0.94
MRPS28-209ENST00000522987 DDR1Q08345 913 aa20.91■□□□□ 0.94
MRPS28-209ENST00000522987 MTHFSDQ2M296 383 aaKnown RBP20.91■□□□□ 0.94
MRPS28-209ENST00000522987 INTS5Q6P9B9 1019 aaKnown RBP20.91■□□□□ 0.94
MRPS28-209ENST00000522987 USP42Q9H9J4 1324 aaKnown RBP20.91■□□□□ 0.94
MRPS28-209ENST00000522987 PER1O15534 1290 aaPredicted RBP20.9■□□□□ 0.94
MRPS28-209ENST00000522987 DIAPH1O60610 1272 aaKnown RBP20.9■□□□□ 0.94
MRPS28-209ENST00000522987 KCPQ6ZWJ8 1503 aa20.89■□□□□ 0.94
MRPS28-209ENST00000522987 MRC1P22897 1456 aa20.89■□□□□ 0.94
MRPS28-209ENST00000522987 UBR2Q8IWV8 1755 aa20.88■□□□□ 0.93
MRPS28-209ENST00000522987 U2SURPO15042 1029 aaKnown RBP20.88■□□□□ 0.93
MRPS28-209ENST00000522987 USPL1Q5W0Q7 1092 aa20.88■□□□□ 0.93
MRPS28-209ENST00000522987 CHRNA5P30532 468 aa20.87■□□□□ 0.93
MRPS28-209ENST00000522987 KCNA3P22001 575 aa20.86■□□□□ 0.93
MRPS28-209ENST00000522987 COL3A1P02461 1466 aaPredicted RBP20.86■□□□□ 0.93
MRPS28-209ENST00000522987 SBF1O95248 1867 aa20.86■□□□□ 0.93
MRPS28-209ENST00000522987 ZPR1O75312 459 aa20.85■□□□□ 0.93
MRPS28-209ENST00000522987 CYP19A1P11511 503 aaPredicted RBP20.85■□□□□ 0.93
MRPS28-209ENST00000522987 ZBTB1Q9Y2K1 713 aa20.85■□□□□ 0.93
MRPS28-209ENST00000522987 SIPA1L3O60292 1781 aaPredicted RBP20.85■□□□□ 0.93
MRPS28-209ENST00000522987 SOS1Q07889 1333 aaPredicted RBP20.84■□□□□ 0.93
MRPS28-209ENST00000522987 CCDC88AQ3V6T2 1871 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms