RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	ADAMTS19	Q8TE59	1207 aa		9.91	□□□□□ -0.82
EIF3E-216	ENST00000522887	PLB1	Q6P1J6	1458 aa		9.91	□□□□□ -0.82
EIF3E-216	ENST00000522887	NR3C2	P08235	984 aa		9.9	□□□□□ -0.82
EIF3E-216	ENST00000522887	PLEKHM2	Q8IWE5	1019 aa		9.9	□□□□□ -0.82
EIF3E-216	ENST00000522887	MAPKBP1	O60336	1514 aa		9.89	□□□□□ -0.83
EIF3E-216	ENST00000522887	UGGT2	Q9NYU1	1516 aa		9.89	□□□□□ -0.83
EIF3E-216	ENST00000522887	ERVH48-1	M5A8F1	160 aa		9.89	□□□□□ -0.83
EIF3E-216	ENST00000522887	KCNMA1	Q12791	1236 aa		9.89	□□□□□ -0.83
EIF3E-216	ENST00000522887	SERPINA10	Q9UK55	444 aa		9.89	□□□□□ -0.83
EIF3E-216	ENST00000522887	DOLK	Q9UPQ8	538 aa		9.89	□□□□□ -0.83
EIF3E-216	ENST00000522887	PRX	Q9BXM0	1461 aa		9.89	□□□□□ -0.83
EIF3E-216	ENST00000522887	ATP9B	O43861	1147 aa		9.88	□□□□□ -0.83
EIF3E-216	ENST00000522887	TIMP2	P16035	220 aa		9.88	□□□□□ -0.83
EIF3E-216	ENST00000522887	WDR4	P57081	412 aa	Known RBP	9.88	□□□□□ -0.83
EIF3E-216	ENST00000522887	ERVK-9	P63128	1117 aa		9.88	□□□□□ -0.83
EIF3E-216	ENST00000522887	TRIM46	Q7Z4K8	759 aa		9.88	□□□□□ -0.83
EIF3E-216	ENST00000522887	TMEM151A	Q8N4L1	468 aa		9.88	□□□□□ -0.83
EIF3E-216	ENST00000522887	EEA1	Q15075	1411 aa		9.88	□□□□□ -0.83
EIF3E-216	ENST00000522887	RNF225	M0QZC1	329 aa	Predicted RBP	9.87	□□□□□ -0.83
EIF3E-216	ENST00000522887	MYC	P01106	439 aa	Predicted RBP	9.87	□□□□□ -0.83
EIF3E-216	ENST00000522887	USP4	Q13107	963 aa		9.87	□□□□□ -0.83
EIF3E-216	ENST00000522887	CC2D2B	Q6DHV5	1058 aa		9.87	□□□□□ -0.83
EIF3E-216	ENST00000522887	PLPP7	Q8NBV4	271 aa		9.87	□□□□□ -0.83
EIF3E-216	ENST00000522887	ZNF777	Q9ULD5	760 aa	Predicted RBP	9.87	□□□□□ -0.83
EIF3E-216	ENST00000522887	PCDHB11	Q9Y5F2	797 aa		9.87	□□□□□ -0.83
EIF3E-216	ENST00000522887	UHRF1BP1L	A0JNW5	1464 aa		9.86	□□□□□ -0.83
EIF3E-216	ENST00000522887	KIAA0556	O60303	1618 aa		9.86	□□□□□ -0.83
EIF3E-216	ENST00000522887	PLEKHD1	A6NEE1	506 aa		9.86	□□□□□ -0.83
EIF3E-216	ENST00000522887	ZIC2	O95409	532 aa	Predicted RBP	9.86	□□□□□ -0.83
EIF3E-216	ENST00000522887		Q6ZVU0	165 aa		9.86	□□□□□ -0.83
EIF3E-216	ENST00000522887	UCN2	Q96RP3	112 aa		9.86	□□□□□ -0.83
EIF3E-216	ENST00000522887	DIP2B	Q9P265	1576 aa		9.85	□□□□□ -0.83
EIF3E-216	ENST00000522887	SCARF1	Q14162	830 aa		9.85	□□□□□ -0.83
EIF3E-216	ENST00000522887	CCDC97	Q96F63	343 aa	Predicted RBP	9.85	□□□□□ -0.83
EIF3E-216	ENST00000522887	CCDC85A	Q96PX6	553 aa	Predicted RBP	9.85	□□□□□ -0.83
EIF3E-216	ENST00000522887	ESF1	Q9H501	851 aa	Known RBP	9.85	□□□□□ -0.83
EIF3E-216	ENST00000522887	EML3	Q32P44	896 aa		9.84	□□□□□ -0.83
EIF3E-216	ENST00000522887	CYP2U1	Q7Z449	544 aa		9.84	□□□□□ -0.83
EIF3E-216	ENST00000522887	MEIOB	Q8N635	442 aa		9.84	□□□□□ -0.83
EIF3E-216	ENST00000522887	ZNF784	Q8NCA9	323 aa	Predicted RBP	9.84	□□□□□ -0.83
EIF3E-216	ENST00000522887	ITPKC	Q96DU7	683 aa		9.84	□□□□□ -0.83
EIF3E-216	ENST00000522887	PPP1R12C	Q9BZL4	782 aa		9.84	□□□□□ -0.83
EIF3E-216	ENST00000522887	TSPOAP1	O95153	1857 aa		9.84	□□□□□ -0.83
EIF3E-216	ENST00000522887	CD109	Q6YHK3	1445 aa		9.83	□□□□□ -0.84
EIF3E-216	ENST00000522887	USP17L5	A8MUK1	530 aa		9.83	□□□□□ -0.84
EIF3E-216	ENST00000522887	LILRA1	O75019	489 aa		9.83	□□□□□ -0.84
EIF3E-216	ENST00000522887	GDF11	O95390	407 aa		9.83	□□□□□ -0.84
EIF3E-216	ENST00000522887	SKI	P12755	728 aa		9.83	□□□□□ -0.84
EIF3E-216	ENST00000522887	TRIM50	Q86XT4	487 aa		9.83	□□□□□ -0.84
EIF3E-216	ENST00000522887	ZFP42	Q96MM3	310 aa		9.83	□□□□□ -0.84
EIF3E-216	ENST00000522887	TSEN34	Q9BSV6	310 aa	Known RBP	9.83	□□□□□ -0.84
EIF3E-216	ENST00000522887	EPRS	P07814	1512 aa	Known RBP	9.82	□□□□□ -0.84
EIF3E-216	ENST00000522887	KDM6B	O15054	1643 aa		9.82	□□□□□ -0.84
EIF3E-216	ENST00000522887	UPP2	O95045	317 aa		9.82	□□□□□ -0.84
EIF3E-216	ENST00000522887	MAFB	Q9Y5Q3	323 aa	Predicted RBP	9.82	□□□□□ -0.84
EIF3E-216	ENST00000522887	WDR7	Q9Y4E6	1490 aa		9.82	□□□□□ -0.84
EIF3E-216	ENST00000522887	KDM5B	Q9UGL1	1544 aa		9.82	□□□□□ -0.84
EIF3E-216	ENST00000522887	FHOD3	Q2V2M9	1422 aa		9.82	□□□□□ -0.84
EIF3E-216	ENST00000522887	PALM3	A6NDB9	673 aa	Predicted RBP	9.81	□□□□□ -0.84
EIF3E-216	ENST00000522887	ATP5J2-PTCD1	G3V325	749 aa		9.81	□□□□□ -0.84
EIF3E-216	ENST00000522887	ADH1A	P07327	375 aa		9.81	□□□□□ -0.84
EIF3E-216	ENST00000522887	RAB15	P59190	212 aa		9.81	□□□□□ -0.84
EIF3E-216	ENST00000522887	NOD1	Q9Y239	953 aa		9.81	□□□□□ -0.84
EIF3E-216	ENST00000522887	KIF13A	Q9H1H9	1805 aa		9.81	□□□□□ -0.84
EIF3E-216	ENST00000522887	TEX14	Q8IWB6	1497 aa		9.8	□□□□□ -0.84
EIF3E-216	ENST00000522887	USP17L3	A6NCW0	530 aa		9.8	□□□□□ -0.84
EIF3E-216	ENST00000522887	USP17L4	A6NCW7	530 aa		9.8	□□□□□ -0.84
EIF3E-216	ENST00000522887	PIK3CD	O00329	1044 aa		9.8	□□□□□ -0.84
EIF3E-216	ENST00000522887	USP17L2	Q6R6M4	530 aa		9.8	□□□□□ -0.84
EIF3E-216	ENST00000522887	USP17L1	Q7RTZ2	530 aa		9.8	□□□□□ -0.84
EIF3E-216	ENST00000522887	CTTNBP2	Q8WZ74	1663 aa		9.8	□□□□□ -0.84
EIF3E-216	ENST00000522887	ARID4B	Q4LE39	1312 aa	Predicted RBP	9.8	□□□□□ -0.84
EIF3E-216	ENST00000522887	GNRH1	P01148	92 aa		9.79	□□□□□ -0.84
EIF3E-216	ENST00000522887	ATP1A2	P50993	1020 aa		9.79	□□□□□ -0.84
EIF3E-216	ENST00000522887	TBC1D9	Q6ZT07	1266 aa		9.79	□□□□□ -0.84
EIF3E-216	ENST00000522887	ZFAND3	Q9H8U3	227 aa		9.79	□□□□□ -0.84
EIF3E-216	ENST00000522887	TMPRSS4	Q9NRS4	437 aa		9.79	□□□□□ -0.84
EIF3E-216	ENST00000522887	ZCCHC11	Q5TAX3	1644 aa	Known RBP	9.78	□□□□□ -0.84
EIF3E-216	ENST00000522887	WASL	O00401	505 aa	Predicted RBP	9.78	□□□□□ -0.84
EIF3E-216	ENST00000522887	VSIG8	P0DPA2	414 aa		9.78	□□□□□ -0.84
EIF3E-216	ENST00000522887	RASSF7	Q02833	373 aa		9.78	□□□□□ -0.84
EIF3E-216	ENST00000522887	CYLD	Q9NQC7	956 aa		9.78	□□□□□ -0.84
EIF3E-216	ENST00000522887	TFIP11	Q9UBB9	837 aa	Known RBP	9.78	□□□□□ -0.84
EIF3E-216	ENST00000522887	CDK11A	Q9UQ88	783 aa	Predicted RBP	9.78	□□□□□ -0.84
EIF3E-216	ENST00000522887	NCOA4	Q13772	614 aa		9.77	□□□□□ -0.85
EIF3E-216	ENST00000522887	OXLD1	Q5BKU9	147 aa		9.77	□□□□□ -0.85
EIF3E-216	ENST00000522887	MRPL14	Q6P1L8	145 aa	Known RBP	9.77	□□□□□ -0.85
EIF3E-216	ENST00000522887	ATP10B	O94823	1461 aa		9.77	□□□□□ -0.85
EIF3E-216	ENST00000522887	RAPGEF3	O95398	923 aa		9.76	□□□□□ -0.85
EIF3E-216	ENST00000522887	ESCO1	Q5FWF5	840 aa		9.76	□□□□□ -0.85
EIF3E-216	ENST00000522887	CFAP70	Q5T0N1	1121 aa		9.76	□□□□□ -0.85
EIF3E-216	ENST00000522887	LINC00528	Q8N1L1	170 aa		9.76	□□□□□ -0.85
EIF3E-216	ENST00000522887	OSBPL3	Q9H4L5	887 aa		9.76	□□□□□ -0.85
EIF3E-216	ENST00000522887	GPC1	P35052	558 aa		9.75	□□□□□ -0.85
EIF3E-216	ENST00000522887	PTGIR	P43119	386 aa		9.75	□□□□□ -0.85
EIF3E-216	ENST00000522887	SCTR	P47872	440 aa		9.75	□□□□□ -0.85
EIF3E-216	ENST00000522887	CDCA7	Q9BWT1	371 aa	Predicted RBP	9.75	□□□□□ -0.85
EIF3E-216	ENST00000522887	ABCA8	O94911	1581 aa		9.75	□□□□□ -0.85
EIF3E-216	ENST00000522887	GLI2	P10070	1586 aa		9.75	□□□□□ -0.85
EIF3E-216	ENST00000522887	SPINT1	O43278	529 aa		9.74	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms