RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 CNTNAP1P78357 1384 aa8.35□□□□□ -1.07
ARFGEF1-208ENST00000522878 KRT28Q7Z3Y7 464 aa8.35□□□□□ -1.07
ARFGEF1-208ENST00000522878 KIF13BQ9NQT8 1826 aa8.35□□□□□ -1.07
ARFGEF1-208ENST00000522878 IFT172Q9UG01 1749 aa8.34□□□□□ -1.07
ARFGEF1-208ENST00000522878 PNPLA7Q6ZV29 1317 aa8.34□□□□□ -1.07
ARFGEF1-208ENST00000522878 LAMA3Q16787 3333 aa8.34□□□□□ -1.07
ARFGEF1-208ENST00000522878 N4BP2Q86UW6 1770 aaPredicted RBP8.34□□□□□ -1.07
ARFGEF1-208ENST00000522878 ERBINQ96RT1 1412 aa8.34□□□□□ -1.07
ARFGEF1-208ENST00000522878 LTBP1Q14766 1721 aa8.34□□□□□ -1.07
ARFGEF1-208ENST00000522878 TTC28Q96AY4 2481 aa8.34□□□□□ -1.08
ARFGEF1-208ENST00000522878 LMO7Q8WWI1 1683 aa8.34□□□□□ -1.08
ARFGEF1-208ENST00000522878 LAMA2P24043 3122 aaKnown RBP8.33□□□□□ -1.08
ARFGEF1-208ENST00000522878 PSEN1P49768 467 aa8.33□□□□□ -1.08
ARFGEF1-208ENST00000522878 CCDC88AQ3V6T2 1871 aa8.33□□□□□ -1.08
ARFGEF1-208ENST00000522878 SSH2Q76I76 1423 aa8.33□□□□□ -1.08
ARFGEF1-208ENST00000522878 ZC3H15Q8WU90 426 aaKnown RBP8.33□□□□□ -1.08
ARFGEF1-208ENST00000522878 CD2APQ9Y5K6 639 aa8.33□□□□□ -1.08
ARFGEF1-208ENST00000522878 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.32□□□□□ -1.08
ARFGEF1-208ENST00000522878 HOXB3P14651 431 aaPredicted RBP8.32□□□□□ -1.08
ARFGEF1-208ENST00000522878 ZFP91Q96JP5 570 aaPredicted RBP8.32□□□□□ -1.08
ARFGEF1-208ENST00000522878 MCOLN1Q9GZU1 580 aa8.32□□□□□ -1.08
ARFGEF1-208ENST00000522878 USP35Q9P2H5 1018 aa8.32□□□□□ -1.08
ARFGEF1-208ENST00000522878 PIEZO1Q92508 2521 aa8.31□□□□□ -1.08
ARFGEF1-208ENST00000522878 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
ARFGEF1-208ENST00000522878 RNF166Q96A37 237 aaPredicted RBP8.31□□□□□ -1.08
ARFGEF1-208ENST00000522878 SLC24A3Q9HC58 644 aa8.31□□□□□ -1.08
ARFGEF1-208ENST00000522878 PLEKHG2Q9H7P9 1386 aa8.31□□□□□ -1.08
ARFGEF1-208ENST00000522878 IGSF1Q8N6C5 1336 aa8.3□□□□□ -1.08
ARFGEF1-208ENST00000522878 LAMB4A4D0S4 1761 aa8.3□□□□□ -1.08
ARFGEF1-208ENST00000522878 COL18A1P39060 1754 aa8.3□□□□□ -1.08
ARFGEF1-208ENST00000522878 TRPM1Q7Z4N2 1603 aa8.3□□□□□ -1.08
ARFGEF1-208ENST00000522878 UBTFP17480 764 aaKnown RBP8.3□□□□□ -1.08
ARFGEF1-208ENST00000522878 RRAGCQ9HB90 399 aa8.3□□□□□ -1.08
ARFGEF1-208ENST00000522878 NRXN1Q9ULB1 1477 aa8.3□□□□□ -1.08
ARFGEF1-208ENST00000522878 NAIPQ13075 1403 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 G3V3G9 751 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 TSPY4P0CV99 314 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 TSPY10P0CW01 314 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 CHRM1P11229 460 aaPredicted RBP8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 SOX10P56693 466 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 ZNF710Q8N1W2 664 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 KANK1Q14678 1352 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 PKD1L2Q7Z442 2459 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 CENPFP49454 3210 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 ERBB3P21860 1342 aa8.29□□□□□ -1.08
ARFGEF1-208ENST00000522878 E9PCH4 1651 aa8.28□□□□□ -1.08
ARFGEF1-208ENST00000522878 HOXB1P14653 301 aaPredicted RBP8.28□□□□□ -1.08
ARFGEF1-208ENST00000522878 VEGFBP49765 207 aa8.28□□□□□ -1.08
ARFGEF1-208ENST00000522878 TCP11L2Q8N4U5 519 aa8.28□□□□□ -1.08
ARFGEF1-208ENST00000522878 STRN4Q9NRL3 753 aa8.28□□□□□ -1.08
ARFGEF1-208ENST00000522878 LRRC4BQ9NT99 713 aa8.28□□□□□ -1.08
ARFGEF1-208ENST00000522878 BOLA1Q9Y3E2 137 aa8.28□□□□□ -1.08
ARFGEF1-208ENST00000522878 CLTCL1P53675 1640 aa8.28□□□□□ -1.08
ARFGEF1-208ENST00000522878 USP54Q70EL1 1684 aa8.27□□□□□ -1.08
ARFGEF1-208ENST00000522878 BRD4O60885 1362 aaPredicted RBP8.27□□□□□ -1.09
ARFGEF1-208ENST00000522878 LY75O60449 1722 aa8.27□□□□□ -1.09
ARFGEF1-208ENST00000522878 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
ARFGEF1-208ENST00000522878 PRDM11Q9NQV5 511 aa8.27□□□□□ -1.09
ARFGEF1-208ENST00000522878 KDM2BQ8NHM5 1336 aa8.27□□□□□ -1.09
ARFGEF1-208ENST00000522878 KIAA0232Q92628 1395 aa8.26□□□□□ -1.09
ARFGEF1-208ENST00000522878 ARHGEF1Q92888 912 aaKnown RBP8.26□□□□□ -1.09
ARFGEF1-208ENST00000522878 CABP2Q9NPB3 220 aa8.26□□□□□ -1.09
ARFGEF1-208ENST00000522878 CACNA1GO43497 2377 aa8.25□□□□□ -1.09
ARFGEF1-208ENST00000522878 PDAP1Q13442 181 aaKnown RBP8.25□□□□□ -1.09
ARFGEF1-208ENST00000522878 DOK7Q18PE1 504 aa8.25□□□□□ -1.09
ARFGEF1-208ENST00000522878 CEP162Q5TB80 1403 aa8.25□□□□□ -1.09
ARFGEF1-208ENST00000522878 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 EYSQ5T1H1 3165 aa8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 KIAA0100Q14667 2235 aaKnown RBP8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 PSME1Q06323 249 aa8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 TRIM26Q12899 539 aaPredicted RBP8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 CHRNA2Q15822 529 aa8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 VARS2Q5ST30 1063 aaKnown RBP8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 LARP1Q6PKG0 1096 aaKnown RBP8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 ZMYND15Q9H091 742 aa8.24□□□□□ -1.09
ARFGEF1-208ENST00000522878 TIAM2Q8IVF5 1701 aa8.23□□□□□ -1.09
ARFGEF1-208ENST00000522878 MARCH10Q8NA82 808 aaPredicted RBP8.23□□□□□ -1.09
ARFGEF1-208ENST00000522878 RSPH6AQ9H0K4 717 aa8.23□□□□□ -1.09
ARFGEF1-208ENST00000522878 THRAP3Q9Y2W1 955 aaKnown RBP8.23□□□□□ -1.09
ARFGEF1-208ENST00000522878 SPATA31E1Q6ZUB1 1445 aa8.22□□□□□ -1.09
ARFGEF1-208ENST00000522878 C9orf131Q5VYM1 1079 aa8.22□□□□□ -1.09
ARFGEF1-208ENST00000522878 NPM2Q86SE8 214 aaKnown RBP8.22□□□□□ -1.09
ARFGEF1-208ENST00000522878 HTTP42858 3142 aa8.21□□□□□ -1.1
ARFGEF1-208ENST00000522878 TAF1LQ8IZX4 1826 aa8.21□□□□□ -1.1
ARFGEF1-208ENST00000522878 ITSN1Q15811 1721 aa8.2□□□□□ -1.1
ARFGEF1-208ENST00000522878 MSL1Q68DK7 614 aa8.2□□□□□ -1.1
ARFGEF1-208ENST00000522878 SNX27Q96L92 541 aa8.2□□□□□ -1.1
ARFGEF1-208ENST00000522878 COL25A1Q9BXS0 654 aaPredicted RBP8.2□□□□□ -1.1
ARFGEF1-208ENST00000522878 PPLO60437 1756 aa8.2□□□□□ -1.1
ARFGEF1-208ENST00000522878 NCOR1O75376 2440 aa8.19□□□□□ -1.1
ARFGEF1-208ENST00000522878 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
ARFGEF1-208ENST00000522878 RIMBP2O15034 1052 aa8.19□□□□□ -1.1
ARFGEF1-208ENST00000522878 SEMA3EO15041 775 aa8.19□□□□□ -1.1
ARFGEF1-208ENST00000522878 MAP2K1Q02750 393 aaPredicted RBP8.19□□□□□ -1.1
ARFGEF1-208ENST00000522878 PHF8Q9UPP1 1060 aa8.19□□□□□ -1.1
ARFGEF1-208ENST00000522878 DICER1Q9UPY3 1922 aaKnown RBP8.19□□□□□ -1.1
ARFGEF1-208ENST00000522878 COL5A2P05997 1499 aaPredicted RBP8.19□□□□□ -1.1
ARFGEF1-208ENST00000522878 TOGARAM1Q9Y4F4 1720 aa8.18□□□□□ -1.1
ARFGEF1-208ENST00000522878 ZMYND10O75800 440 aa8.18□□□□□ -1.1
ARFGEF1-208ENST00000522878 DGKZQ13574 1117 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms