RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 GRIPAP1Q4V328 841 aa9.99□□□□□ -0.81
VPS13B-211ENST00000522802 COL22A1Q8NFW1 1626 aaPredicted RBP9.99□□□□□ -0.81
VPS13B-211ENST00000522802 MARF1Q9Y4F3 1742 aaKnown RBP9.99□□□□□ -0.81
VPS13B-211ENST00000522802 ATRNO75882 1429 aa9.99□□□□□ -0.81
VPS13B-211ENST00000522802 SPTLC1O15269 473 aa9.98□□□□□ -0.81
VPS13B-211ENST00000522802 NDUFV2P19404 249 aa9.98□□□□□ -0.81
VPS13B-211ENST00000522802 RIC3Q7Z5B4 369 aa9.98□□□□□ -0.81
VPS13B-211ENST00000522802 ANKRD30AQ9BXX3 1397 aa9.98□□□□□ -0.81
VPS13B-211ENST00000522802 ADGRL3Q9HAR2 1447 aa9.98□□□□□ -0.81
VPS13B-211ENST00000522802 ADGRL2O95490 1459 aa9.98□□□□□ -0.81
VPS13B-211ENST00000522802 IQGAP3Q86VI3 1631 aa9.97□□□□□ -0.81
VPS13B-211ENST00000522802 MORN1Q5T089 497 aa9.97□□□□□ -0.81
VPS13B-211ENST00000522802 RSBN1LQ6PCB5 846 aaPredicted RBP9.97□□□□□ -0.81
VPS13B-211ENST00000522802 NGLY1Q96IV0 654 aa9.97□□□□□ -0.81
VPS13B-211ENST00000522802 POLR3EQ9NVU0 708 aa9.97□□□□□ -0.81
VPS13B-211ENST00000522802 AMOTL2Q9Y2J4 779 aa9.97□□□□□ -0.81
VPS13B-211ENST00000522802 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
VPS13B-211ENST00000522802 TUSC1Q2TAM9 212 aa9.96□□□□□ -0.82
VPS13B-211ENST00000522802 PUS10Q3MIT2 529 aaKnown RBP9.96□□□□□ -0.82
VPS13B-211ENST00000522802 HLA-CQ95604 372 aa9.96□□□□□ -0.82
VPS13B-211ENST00000522802 LRRC59Q96AG4 307 aaKnown RBP9.96□□□□□ -0.82
VPS13B-211ENST00000522802 CHIC2Q9UKJ5 165 aa9.96□□□□□ -0.82
VPS13B-211ENST00000522802 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.82
VPS13B-211ENST00000522802 Q6ZNB5 142 aa9.95□□□□□ -0.82
VPS13B-211ENST00000522802 LIMD1Q9UGP4 676 aa9.95□□□□□ -0.82
VPS13B-211ENST00000522802 USP21Q9UK80 565 aa9.95□□□□□ -0.82
VPS13B-211ENST00000522802 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.95□□□□□ -0.82
VPS13B-211ENST00000522802 GLI3P10071 1580 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 MYOM2P54296 1465 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 C1orf167Q5SNV9 1468 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 PTCH1Q13635 1447 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 FDX1P10109 184 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 CLK2P49760 499 aaKnown RBP9.94□□□□□ -0.82
VPS13B-211ENST00000522802 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 BLOC1S3Q6QNY0 202 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 SCUBE3Q8IX30 993 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 PROCA1Q8NCQ7 364 aaPredicted RBP9.94□□□□□ -0.82
VPS13B-211ENST00000522802 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS13B-211ENST00000522802 PCDHGC3Q9UN70 934 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
VPS13B-211ENST00000522802 BCL9LQ86UU0 1499 aa9.93□□□□□ -0.82
VPS13B-211ENST00000522802 METP08581 1390 aa9.93□□□□□ -0.82
VPS13B-211ENST00000522802 GUCA2AQ02747 115 aa9.93□□□□□ -0.82
VPS13B-211ENST00000522802 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.93□□□□□ -0.82
VPS13B-211ENST00000522802 TRPC5Q9UL62 973 aaPredicted RBP9.93□□□□□ -0.82
VPS13B-211ENST00000522802 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
VPS13B-211ENST00000522802 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
VPS13B-211ENST00000522802 BLMP54132 1417 aaPredicted RBP9.92□□□□□ -0.82
VPS13B-211ENST00000522802 ANKRD50Q9ULJ7 1429 aa9.92□□□□□ -0.82
VPS13B-211ENST00000522802 KCNC4Q03721 635 aa9.92□□□□□ -0.82
VPS13B-211ENST00000522802 MTRQ99707 1265 aa9.92□□□□□ -0.82
VPS13B-211ENST00000522802 SALL2Q9Y467 1007 aaPredicted RBP9.92□□□□□ -0.82
VPS13B-211ENST00000522802 NR1I2O75469 434 aa9.91□□□□□ -0.82
VPS13B-211ENST00000522802 FNBP4Q8N3X1 1017 aaPredicted RBP9.91□□□□□ -0.82
VPS13B-211ENST00000522802 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
VPS13B-211ENST00000522802 COPS2P61201 443 aa9.9□□□□□ -0.82
VPS13B-211ENST00000522802 DEFB132Q7Z7B7 95 aa9.9□□□□□ -0.82
VPS13B-211ENST00000522802 SOS2Q07890 1332 aaPredicted RBP9.89□□□□□ -0.83
VPS13B-211ENST00000522802 NEXMIFQ5QGS0 1516 aa9.89□□□□□ -0.83
VPS13B-211ENST00000522802 Q3C1V9 767 aa9.89□□□□□ -0.83
VPS13B-211ENST00000522802 PRPF38BQ5VTL8 546 aaKnown RBP9.89□□□□□ -0.83
VPS13B-211ENST00000522802 BRICD5Q6PL45 260 aa9.89□□□□□ -0.83
VPS13B-211ENST00000522802 CCDC125Q86Z20 511 aa9.89□□□□□ -0.83
VPS13B-211ENST00000522802 THAP11Q96EK4 314 aa9.89□□□□□ -0.83
VPS13B-211ENST00000522802 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
VPS13B-211ENST00000522802 RALGAPBQ86X10 1494 aa9.89□□□□□ -0.83
VPS13B-211ENST00000522802 PXDNQ92626 1479 aa9.89□□□□□ -0.83
VPS13B-211ENST00000522802 LILRB3O75022 631 aa9.88□□□□□ -0.83
VPS13B-211ENST00000522802 ZPR1O75312 459 aa9.88□□□□□ -0.83
VPS13B-211ENST00000522802 ORAI2Q96SN7 254 aa9.88□□□□□ -0.83
VPS13B-211ENST00000522802 PLCH1Q4KWH8 1693 aa9.87□□□□□ -0.83
VPS13B-211ENST00000522802 CLTCL1P53675 1640 aa9.87□□□□□ -0.83
VPS13B-211ENST00000522802 QPCTQ16769 361 aa9.87□□□□□ -0.83
VPS13B-211ENST00000522802 PPP2R2DQ66LE6 453 aa9.87□□□□□ -0.83
VPS13B-211ENST00000522802 ZNF516Q92618 1163 aa9.87□□□□□ -0.83
VPS13B-211ENST00000522802 USP32Q8NFA0 1604 aa9.86□□□□□ -0.83
VPS13B-211ENST00000522802 HRCP23327 699 aa9.86□□□□□ -0.83
VPS13B-211ENST00000522802 CSPP1Q1MSJ5 1256 aa9.86□□□□□ -0.83
VPS13B-211ENST00000522802 CDC42BPGQ6DT37 1551 aa9.86□□□□□ -0.83
VPS13B-211ENST00000522802 RNF19BQ6ZMZ0 732 aa9.86□□□□□ -0.83
VPS13B-211ENST00000522802 SYMPKQ92797 1274 aaKnown RBP9.86□□□□□ -0.83
VPS13B-211ENST00000522802 ZBTB3Q9H5J0 574 aa9.86□□□□□ -0.83
VPS13B-211ENST00000522802 ROBO2Q9HCK4 1378 aa9.86□□□□□ -0.83
VPS13B-211ENST00000522802 ABCA3Q99758 1704 aa9.85□□□□□ -0.83
VPS13B-211ENST00000522802 SPDYE5A6NIY4 337 aa9.85□□□□□ -0.83
VPS13B-211ENST00000522802 FMNL1O95466 1100 aaPredicted RBP9.85□□□□□ -0.83
VPS13B-211ENST00000522802 MTMR2Q13614 643 aa9.85□□□□□ -0.83
VPS13B-211ENST00000522802 CABLES1Q8TDN4 633 aa9.85□□□□□ -0.83
VPS13B-211ENST00000522802 GJD4Q96KN9 370 aaPredicted RBP9.85□□□□□ -0.83
VPS13B-211ENST00000522802 SLIT2O94813 1529 aa9.85□□□□□ -0.83
VPS13B-211ENST00000522802 C6orf229H3BNL8 230 aa9.84□□□□□ -0.83
VPS13B-211ENST00000522802 LCE2BO14633 110 aa9.84□□□□□ -0.83
VPS13B-211ENST00000522802 RTL5Q5HYW3 569 aaPredicted RBP9.84□□□□□ -0.83
VPS13B-211ENST00000522802 PRAG1Q86YV5 1406 aa9.83□□□□□ -0.84
VPS13B-211ENST00000522802 TNS1Q9HBL0 1735 aaKnown RBP9.83□□□□□ -0.84
VPS13B-211ENST00000522802 SPSB2Q99619 263 aa9.83□□□□□ -0.84
VPS13B-211ENST00000522802 XPCQ01831 940 aaPredicted RBP9.82□□□□□ -0.84
VPS13B-211ENST00000522802 RETREG3Q86VR2 466 aa9.82□□□□□ -0.84
VPS13B-211ENST00000522802 FAM160A2Q8N612 972 aaPredicted RBP9.82□□□□□ -0.84
VPS13B-211ENST00000522802 USB1Q9BQ65 265 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms