RNA–Protein interactions for RNA: ENST00000522638.1

IGKV3D-34-201, Transcript of immunoglobulin kappa variable 3D-34 (pseudogene), humanhuman

BASIC

Gene IGKV3D-34, Length 302 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-34-201ENST00000522638 LINC00116Q8NCU8 138 aa8.68□□□□□ -1.02
IGKV3D-34-201ENST00000522638 CD163L1Q9NR16 1453 aa8.68□□□□□ -1.02
IGKV3D-34-201ENST00000522638 ADAMTSL1Q8N6G6 1762 aa8.68□□□□□ -1.02
IGKV3D-34-201ENST00000522638 CCDC85CA6NKD9 419 aa8.67□□□□□ -1.02
IGKV3D-34-201ENST00000522638 VEGFBP49765 207 aa8.67□□□□□ -1.02
IGKV3D-34-201ENST00000522638 FER1L6Q2WGJ9 1857 aa8.67□□□□□ -1.02
IGKV3D-34-201ENST00000522638 ZCRB1Q8TBF4 217 aaKnown RBP8.67□□□□□ -1.02
IGKV3D-34-201ENST00000522638 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
IGKV3D-34-201ENST00000522638 ZNF692Q9BU19 519 aaPredicted RBP8.67□□□□□ -1.02
IGKV3D-34-201ENST00000522638 SCN4AP35499 1836 aa8.66□□□□□ -1.02
IGKV3D-34-201ENST00000522638 ADAMTS7Q9UKP4 1686 aa8.66□□□□□ -1.02
IGKV3D-34-201ENST00000522638 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
IGKV3D-34-201ENST00000522638 SBNO2Q9Y2G9 1366 aa8.66□□□□□ -1.02
IGKV3D-34-201ENST00000522638 CASP8AP2Q9UKL3 1982 aa8.66□□□□□ -1.02
IGKV3D-34-201ENST00000522638 NRXN2Q9P2S2 1712 aa8.66□□□□□ -1.02
IGKV3D-34-201ENST00000522638 PASKQ96RG2 1323 aa8.65□□□□□ -1.02
IGKV3D-34-201ENST00000522638 RASSF7Q02833 373 aa8.65□□□□□ -1.02
IGKV3D-34-201ENST00000522638 NBPF1Q3BBV0 1214 aa8.65□□□□□ -1.02
IGKV3D-34-201ENST00000522638 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.02
IGKV3D-34-201ENST00000522638 PIM2Q9P1W9 311 aa8.65□□□□□ -1.02
IGKV3D-34-201ENST00000522638 DALRD3Q5D0E6 543 aaKnown RBP8.64□□□□□ -1.03
IGKV3D-34-201ENST00000522638 NME9Q86XW9 330 aa8.64□□□□□ -1.03
IGKV3D-34-201ENST00000522638 IP6K1Q92551 441 aa8.64□□□□□ -1.03
IGKV3D-34-201ENST00000522638 GNPATO15228 680 aa8.63□□□□□ -1.03
IGKV3D-34-201ENST00000522638 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
IGKV3D-34-201ENST00000522638 POTEJP0CG39 1038 aa8.63□□□□□ -1.03
IGKV3D-34-201ENST00000522638 ITPK1Q13572 414 aa8.63□□□□□ -1.03
IGKV3D-34-201ENST00000522638 CHADLQ6NUI6 762 aa8.63□□□□□ -1.03
IGKV3D-34-201ENST00000522638 KDRP35968 1356 aa8.62□□□□□ -1.03
IGKV3D-34-201ENST00000522638 LMNB1P20700 586 aa8.62□□□□□ -1.03
IGKV3D-34-201ENST00000522638 MPRIPQ6WCQ1 1025 aa8.62□□□□□ -1.03
IGKV3D-34-201ENST00000522638 NLGN1Q8N2Q7 840 aa8.62□□□□□ -1.03
IGKV3D-34-201ENST00000522638 SMARCC1Q92922 1105 aaPredicted RBP8.62□□□□□ -1.03
IGKV3D-34-201ENST00000522638 LTV1Q96GA3 475 aaPredicted RBP8.62□□□□□ -1.03
IGKV3D-34-201ENST00000522638 CACNA1SQ13698 1873 aa8.62□□□□□ -1.03
IGKV3D-34-201ENST00000522638 TRPM7Q96QT4 1865 aa8.62□□□□□ -1.03
IGKV3D-34-201ENST00000522638 CGNL1Q0VF96 1302 aa8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 EVC2Q86UK5 1308 aa8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 COL11A2P13942 1736 aaPredicted RBP8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 GYS1P13807 737 aa8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 SIK1P57059 783 aa8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 TMF1P82094 1093 aa8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 ANKRD31Q8N7Z5 1873 aa8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 ARFGEF2Q9Y6D5 1785 aa8.61□□□□□ -1.03
IGKV3D-34-201ENST00000522638 PCDH11XQ9BZA7 1347 aa8.6□□□□□ -1.03
IGKV3D-34-201ENST00000522638 PCDH11YQ9BZA8 1340 aa8.6□□□□□ -1.03
IGKV3D-34-201ENST00000522638 RASSF10A6NK89 507 aa8.6□□□□□ -1.03
IGKV3D-34-201ENST00000522638 CYP27B1O15528 508 aa8.6□□□□□ -1.03
IGKV3D-34-201ENST00000522638 CHRNA5P30532 468 aa8.6□□□□□ -1.03
IGKV3D-34-201ENST00000522638 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.6□□□□□ -1.03
IGKV3D-34-201ENST00000522638 PIGBQ92521 554 aa8.6□□□□□ -1.03
IGKV3D-34-201ENST00000522638 TJP1Q07157 1748 aa8.6□□□□□ -1.03
IGKV3D-34-201ENST00000522638 NFKBIEO00221 500 aa8.59□□□□□ -1.03
IGKV3D-34-201ENST00000522638 HOXC9P31274 260 aa8.59□□□□□ -1.03
IGKV3D-34-201ENST00000522638 DDR1Q08345 913 aa8.59□□□□□ -1.03
IGKV3D-34-201ENST00000522638 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
IGKV3D-34-201ENST00000522638 PARP3Q9Y6F1 533 aa8.59□□□□□ -1.03
IGKV3D-34-201ENST00000522638 EDC4Q6P2E9 1401 aaKnown RBP8.59□□□□□ -1.03
IGKV3D-34-201ENST00000522638 MAP3K19Q56UN5 1328 aa8.58□□□□□ -1.04
IGKV3D-34-201ENST00000522638 TMEM88BA6NKF7 163 aa8.58□□□□□ -1.04
IGKV3D-34-201ENST00000522638 ITGBL1O95965 494 aaPredicted RBP8.58□□□□□ -1.04
IGKV3D-34-201ENST00000522638 NBPF6Q5VWK0 638 aa8.58□□□□□ -1.04
IGKV3D-34-201ENST00000522638 ARHGEF1Q92888 912 aaKnown RBP8.58□□□□□ -1.04
IGKV3D-34-201ENST00000522638 NBPF4Q96M43 638 aa8.58□□□□□ -1.04
IGKV3D-34-201ENST00000522638 MCOLN1Q9GZU1 580 aa8.58□□□□□ -1.04
IGKV3D-34-201ENST00000522638 RTL1A6NKG5 1358 aa8.58□□□□□ -1.04
IGKV3D-34-201ENST00000522638 WDR33Q9C0J8 1336 aaKnown RBP8.57□□□□□ -1.04
IGKV3D-34-201ENST00000522638 NCAPD2Q15021 1401 aa8.57□□□□□ -1.04
IGKV3D-34-201ENST00000522638 SMG6Q86US8 1419 aaKnown RBP8.57□□□□□ -1.04
IGKV3D-34-201ENST00000522638 ADRA2BP18089 450 aa8.57□□□□□ -1.04
IGKV3D-34-201ENST00000522638 MAP2K1Q02750 393 aaPredicted RBP8.57□□□□□ -1.04
IGKV3D-34-201ENST00000522638 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
IGKV3D-34-201ENST00000522638 USHBP1Q8N6Y0 703 aa8.57□□□□□ -1.04
IGKV3D-34-201ENST00000522638 ATP6V1AP38606 617 aa8.56□□□□□ -1.04
IGKV3D-34-201ENST00000522638 NKX1-1Q15270 411 aaPredicted RBP8.56□□□□□ -1.04
IGKV3D-34-201ENST00000522638 SLC4A9Q96Q91 983 aa8.56□□□□□ -1.04
IGKV3D-34-201ENST00000522638 ASAP1Q9ULH1 1129 aa8.56□□□□□ -1.04
IGKV3D-34-201ENST00000522638 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
IGKV3D-34-201ENST00000522638 CNTNAP4Q9C0A0 1308 aa8.55□□□□□ -1.04
IGKV3D-34-201ENST00000522638 ANKRD26Q9UPS8 1709 aa8.55□□□□□ -1.04
IGKV3D-34-201ENST00000522638 LDHDQ86WU2 507 aa8.55□□□□□ -1.04
IGKV3D-34-201ENST00000522638 RAPGEF4Q8WZA2 1011 aa8.55□□□□□ -1.04
IGKV3D-34-201ENST00000522638 CFAP44Q96MT7 982 aa8.55□□□□□ -1.04
IGKV3D-34-201ENST00000522638 A0A1W2PP64 1363 aa8.55□□□□□ -1.04
IGKV3D-34-201ENST00000522638 POLRMTO00411 1230 aaKnown RBP8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 TATP17735 454 aaPredicted RBP8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 FKBP8Q14318 412 aa8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 DEFB115Q30KQ5 88 aa8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 RC3H1Q5TC82 1133 aaKnown RBP8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 DPY19L2Q6NUT2 758 aa8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 ATG3Q9NT62 314 aa8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 SLX4Q8IY92 1834 aa8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
IGKV3D-34-201ENST00000522638 RAB3GAP2Q9H2M9 1393 aa8.53□□□□□ -1.04
IGKV3D-34-201ENST00000522638 KIF20BQ96Q89 1820 aa8.53□□□□□ -1.04
IGKV3D-34-201ENST00000522638 RPS6KA4O75676 772 aa8.53□□□□□ -1.04
IGKV3D-34-201ENST00000522638 DDNO94850 711 aaPredicted RBP8.53□□□□□ -1.04
IGKV3D-34-201ENST00000522638 FBLN1P23142 703 aa8.53□□□□□ -1.04
IGKV3D-34-201ENST00000522638 RFC4P35249 363 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms