RNA–Protein interactions for RNA: ENST00000522502.1

CLU-213, Transcript of clusterin, human

TSL 2

Gene CLU, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-213	ENST00000522502	RBM42	Q9BTD8	480 aa	Known RBP	13.92	□□□□□ -0.18
CLU-213	ENST00000522502	CNGB1	Q14028	1251 aa	Predicted RBP	13.91	□□□□□ -0.18
CLU-213	ENST00000522502	CCER1	Q8TC90	406 aa	Predicted RBP	13.91	□□□□□ -0.18
CLU-213	ENST00000522502	ZNF526	Q8TF50	670 aa	Predicted RBP	13.91	□□□□□ -0.18
CLU-213	ENST00000522502	TIMELESS	Q9UNS1	1208 aa		13.91	□□□□□ -0.18
CLU-213	ENST00000522502	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.9	□□□□□ -0.18
CLU-213	ENST00000522502	KDR	P35968	1356 aa		13.9	□□□□□ -0.18
CLU-213	ENST00000522502	KIAA1551	Q9HCM1	1747 aa		13.9	□□□□□ -0.18
CLU-213	ENST00000522502	MORC1	Q86VD1	984 aa		13.89	□□□□□ -0.19
CLU-213	ENST00000522502	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
CLU-213	ENST00000522502	CD2AP	Q9Y5K6	639 aa		13.89	□□□□□ -0.19
CLU-213	ENST00000522502	COL5A3	P25940	1745 aa	Predicted RBP	13.89	□□□□□ -0.19
CLU-213	ENST00000522502	MMP10	P09238	476 aa		13.88	□□□□□ -0.19
CLU-213	ENST00000522502	SULT6B1	Q6IMI4	303 aa		13.88	□□□□□ -0.19
CLU-213	ENST00000522502	ATP10D	Q9P241	1426 aa		13.88	□□□□□ -0.19
CLU-213	ENST00000522502	PTCD1	O75127	700 aa	Known RBP	13.87	□□□□□ -0.19
CLU-213	ENST00000522502	SSFA2	P28290	1259 aa		13.87	□□□□□ -0.19
CLU-213	ENST00000522502	IL13	P35225	146 aa		13.87	□□□□□ -0.19
CLU-213	ENST00000522502	NFATC2IP	Q8NCF5	419 aa		13.87	□□□□□ -0.19
CLU-213	ENST00000522502	FLAD1	Q8NFF5	587 aa		13.87	□□□□□ -0.19
CLU-213	ENST00000522502	ARHGEF1	Q92888	912 aa	Known RBP	13.87	□□□□□ -0.19
CLU-213	ENST00000522502	LGR6	Q9HBX8	967 aa		13.87	□□□□□ -0.19
CLU-213	ENST00000522502	SRP68	Q9UHB9	627 aa	Known RBP	13.87	□□□□□ -0.19
CLU-213	ENST00000522502	VIRMA	Q69YN4	1812 aa	Known RBP	13.87	□□□□□ -0.19
CLU-213	ENST00000522502	CLSPN	Q9HAW4	1339 aa		13.87	□□□□□ -0.19
CLU-213	ENST00000522502	C4A	P0C0L4	1744 aa		13.87	□□□□□ -0.19
CLU-213	ENST00000522502	CIC	Q96RK0	1608 aa	Predicted RBP	13.86	□□□□□ -0.19
CLU-213	ENST00000522502		A0A0G2JLW4	131 aa		13.86	□□□□□ -0.19
CLU-213	ENST00000522502	GIGYF1	O75420	1035 aa	Predicted RBP	13.86	□□□□□ -0.19
CLU-213	ENST00000522502	KIF7	Q2M1P5	1343 aa		13.86	□□□□□ -0.19
CLU-213	ENST00000522502	TJP1	Q07157	1748 aa		13.85	□□□□□ -0.19
CLU-213	ENST00000522502	GRIN3B	O60391	1043 aa		13.85	□□□□□ -0.19
CLU-213	ENST00000522502	HMOX1	P09601	288 aa		13.85	□□□□□ -0.19
CLU-213	ENST00000522502	CABP4	P57796	275 aa		13.85	□□□□□ -0.19
CLU-213	ENST00000522502	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.85	□□□□□ -0.19
CLU-213	ENST00000522502	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.85	□□□□□ -0.19
CLU-213	ENST00000522502	SCN11A	Q9UI33	1791 aa		13.84	□□□□□ -0.19
CLU-213	ENST00000522502	ERVV-2	B6SEH9	535 aa		13.84	□□□□□ -0.19
CLU-213	ENST00000522502	MTHFS	P49914	203 aa		13.84	□□□□□ -0.19
CLU-213	ENST00000522502	SLC39A6	Q13433	755 aa		13.84	□□□□□ -0.19
CLU-213	ENST00000522502	CC2D1B	Q5T0F9	858 aa	Known RBP	13.84	□□□□□ -0.19
CLU-213	ENST00000522502	TRAPPC3L	Q5T215	181 aa		13.84	□□□□□ -0.19
CLU-213	ENST00000522502	DCAF5	Q96JK2	942 aa		13.84	□□□□□ -0.19
CLU-213	ENST00000522502	PXDNL	A1KZ92	1463 aa		13.84	□□□□□ -0.19
CLU-213	ENST00000522502	KIF13B	Q9NQT8	1826 aa		13.83	□□□□□ -0.2
CLU-213	ENST00000522502	GYS1	P13807	737 aa		13.83	□□□□□ -0.2
CLU-213	ENST00000522502	RTCB	Q9Y3I0	505 aa	Known RBP	13.83	□□□□□ -0.2
CLU-213	ENST00000522502	DPEP1	P16444	411 aa		13.82	□□□□□ -0.2
CLU-213	ENST00000522502	KNSTRN	Q9Y448	316 aa		13.82	□□□□□ -0.2
CLU-213	ENST00000522502	ADCY9	O60503	1353 aa		13.82	□□□□□ -0.2
CLU-213	ENST00000522502	ADAMTS7	Q9UKP4	1686 aa		13.82	□□□□□ -0.2
CLU-213	ENST00000522502	CRKL	P46109	303 aa	Known RBP	13.81	□□□□□ -0.2
CLU-213	ENST00000522502	DDR1	Q08345	913 aa		13.81	□□□□□ -0.2
CLU-213	ENST00000522502	FKBP8	Q14318	412 aa		13.81	□□□□□ -0.2
CLU-213	ENST00000522502	DNAJC10	Q8IXB1	793 aa		13.81	□□□□□ -0.2
CLU-213	ENST00000522502	PER1	O15534	1290 aa	Predicted RBP	13.8	□□□□□ -0.2
CLU-213	ENST00000522502	RPS6KA4	O75676	772 aa		13.8	□□□□□ -0.2
CLU-213	ENST00000522502	KCNA3	P22001	575 aa		13.8	□□□□□ -0.2
CLU-213	ENST00000522502	INTS5	Q6P9B9	1019 aa	Known RBP	13.8	□□□□□ -0.2
CLU-213	ENST00000522502	BCS1L	Q9Y276	419 aa		13.8	□□□□□ -0.2
CLU-213	ENST00000522502	BRCA1	P38398	1863 aa	Known RBP	13.8	□□□□□ -0.2
CLU-213	ENST00000522502	ZNF831	Q5JPB2	1677 aa		13.79	□□□□□ -0.2
CLU-213	ENST00000522502	RFC4	P35249	363 aa		13.79	□□□□□ -0.2
CLU-213	ENST00000522502	MTHFSD	Q2M296	383 aa	Known RBP	13.79	□□□□□ -0.2
CLU-213	ENST00000522502	AMOT	Q4VCS5	1084 aa		13.79	□□□□□ -0.2
CLU-213	ENST00000522502	C1orf141	Q5JVX7	400 aa		13.79	□□□□□ -0.2
CLU-213	ENST00000522502	CNTNAP4	Q9C0A0	1308 aa		13.79	□□□□□ -0.2
CLU-213	ENST00000522502	HSP90AB1	P08238	724 aa	Known RBP	13.78	□□□□□ -0.2
CLU-213	ENST00000522502	CHRNA5	P30532	468 aa		13.78	□□□□□ -0.2
CLU-213	ENST00000522502	RC3H1	Q5TC82	1133 aa	Known RBP	13.78	□□□□□ -0.2
CLU-213	ENST00000522502	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.78	□□□□□ -0.2
CLU-213	ENST00000522502	C10orf71	Q711Q0	1435 aa		13.78	□□□□□ -0.2
CLU-213	ENST00000522502	RNMT	O43148	476 aa	Known RBP	13.77	□□□□□ -0.21
CLU-213	ENST00000522502	KIF3C	O14782	793 aa		13.76	□□□□□ -0.21
CLU-213	ENST00000522502	ARHGAP27	Q6ZUM4	889 aa		13.76	□□□□□ -0.21
CLU-213	ENST00000522502	SLC52A2	Q9HAB3	445 aa		13.76	□□□□□ -0.21
CLU-213	ENST00000522502	AFDN	P55196	1824 aa	Known RBP	13.76	□□□□□ -0.21
CLU-213	ENST00000522502	KCP	Q6ZWJ8	1503 aa		13.75	□□□□□ -0.21
CLU-213	ENST00000522502	USP42	Q9H9J4	1324 aa	Known RBP	13.75	□□□□□ -0.21
CLU-213	ENST00000522502	AKAP4	Q5JQC9	854 aa		13.75	□□□□□ -0.21
CLU-213	ENST00000522502	USPL1	Q5W0Q7	1092 aa		13.75	□□□□□ -0.21
CLU-213	ENST00000522502	NLGN1	Q8N2Q7	840 aa		13.75	□□□□□ -0.21
CLU-213	ENST00000522502	COL3A1	P02461	1466 aa	Predicted RBP	13.74	□□□□□ -0.21
CLU-213	ENST00000522502	FCHSD2	O94868	740 aa		13.74	□□□□□ -0.21
CLU-213	ENST00000522502	BCL2L12	Q9HB09	334 aa		13.74	□□□□□ -0.21
CLU-213	ENST00000522502	ZBTB1	Q9Y2K1	713 aa		13.74	□□□□□ -0.21
CLU-213	ENST00000522502	PARP3	Q9Y6F1	533 aa		13.74	□□□□□ -0.21
CLU-213	ENST00000522502	POLRMT	O00411	1230 aa	Known RBP	13.73	□□□□□ -0.21
CLU-213	ENST00000522502	KCNQ3	O43525	872 aa		13.73	□□□□□ -0.21
CLU-213	ENST00000522502	CYP19A1	P11511	503 aa	Predicted RBP	13.73	□□□□□ -0.21
CLU-213	ENST00000522502	CCDC24	Q8N4L8	307 aa		13.73	□□□□□ -0.21
CLU-213	ENST00000522502	NMRK2	Q9NPI5	230 aa		13.73	□□□□□ -0.21
CLU-213	ENST00000522502	CCDC87	Q9NVE4	849 aa		13.73	□□□□□ -0.21
CLU-213	ENST00000522502	SOS1	Q07889	1333 aa	Predicted RBP	13.72	□□□□□ -0.21
CLU-213	ENST00000522502	DIAPH1	O60610	1272 aa	Known RBP	13.72	□□□□□ -0.21
CLU-213	ENST00000522502	ADRA2B	P18089	450 aa		13.72	□□□□□ -0.21
CLU-213	ENST00000522502	TM4SF1	P30408	202 aa		13.72	□□□□□ -0.21
CLU-213	ENST00000522502	TGFB2	P61812	414 aa		13.72	□□□□□ -0.21
CLU-213	ENST00000522502	MRC1	P22897	1456 aa		13.72	□□□□□ -0.21
CLU-213	ENST00000522502	PLEKHG2	Q9H7P9	1386 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms