RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
PABPC1-219ENST00000522387 HSP90AB1P08238 724 aaKnown RBP16.07■□□□□ 0.16
PABPC1-219ENST00000522387 VIRMAQ69YN4 1812 aaKnown RBP16.07■□□□□ 0.16
PABPC1-219ENST00000522387 CEMIPQ8WUJ3 1361 aa16.07■□□□□ 0.16
PABPC1-219ENST00000522387 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
PABPC1-219ENST00000522387 TAF7Q15545 349 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-219ENST00000522387 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
PABPC1-219ENST00000522387 KRT27Q7Z3Y8 459 aa16.07■□□□□ 0.16
PABPC1-219ENST00000522387 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
PABPC1-219ENST00000522387 SRCAPQ6ZRS2 3230 aa16.06■□□□□ 0.16
PABPC1-219ENST00000522387 E9PSI1 815 aa16.06■□□□□ 0.16
PABPC1-219ENST00000522387 NGEFQ8N5V2 710 aa16.06■□□□□ 0.16
PABPC1-219ENST00000522387 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
PABPC1-219ENST00000522387 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
PABPC1-219ENST00000522387 BRWD3Q6RI45 1802 aa16.05■□□□□ 0.16
PABPC1-219ENST00000522387 GNAI1P63096 354 aa16.05■□□□□ 0.16
PABPC1-219ENST00000522387 EXOSC9Q06265 439 aaKnown RBP16.05■□□□□ 0.16
PABPC1-219ENST00000522387 NKX1-1Q15270 411 aaPredicted RBP16.05■□□□□ 0.16
PABPC1-219ENST00000522387 PIGBQ92521 554 aa16.05■□□□□ 0.16
PABPC1-219ENST00000522387 RGS12O14924 1447 aa16.05■□□□□ 0.16
PABPC1-219ENST00000522387 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
PABPC1-219ENST00000522387 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
PABPC1-219ENST00000522387 IFT57Q9NWB7 429 aa16.05■□□□□ 0.16
PABPC1-219ENST00000522387 TCERG1O14776 1098 aaKnown RBP16.04■□□□□ 0.16
PABPC1-219ENST00000522387 TSPYL6Q8N831 410 aa16.04■□□□□ 0.16
PABPC1-219ENST00000522387 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
PABPC1-219ENST00000522387 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
PABPC1-219ENST00000522387 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
PABPC1-219ENST00000522387 CHL1O00533 1208 aa16.03■□□□□ 0.16
PABPC1-219ENST00000522387 SCN11AQ9UI33 1791 aa16.03■□□□□ 0.16
PABPC1-219ENST00000522387 ZNF853P0CG23 659 aa16.03■□□□□ 0.16
PABPC1-219ENST00000522387 TOGARAM1Q9Y4F4 1720 aa16.03■□□□□ 0.16
PABPC1-219ENST00000522387 PRAMEF22A3QJZ6 481 aa16.02■□□□□ 0.16
PABPC1-219ENST00000522387 C8orf58Q8NAV2 365 aa16.02■□□□□ 0.16
PABPC1-219ENST00000522387 ERVV-2B6SEH9 535 aa16.02■□□□□ 0.15
PABPC1-219ENST00000522387 TRIM37O94972 964 aa16.02■□□□□ 0.15
PABPC1-219ENST00000522387 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.15
PABPC1-219ENST00000522387 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
PABPC1-219ENST00000522387 ANP32EQ9BTT0 268 aa16.01■□□□□ 0.15
PABPC1-219ENST00000522387 KCNQ4P56696 695 aa16.01■□□□□ 0.15
PABPC1-219ENST00000522387 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
PABPC1-219ENST00000522387 TTC5Q8N0Z6 440 aa16.01■□□□□ 0.15
PABPC1-219ENST00000522387 DOT1LQ8TEK3 1739 aa16.01■□□□□ 0.15
PABPC1-219ENST00000522387 IL16Q14005 1332 aa16■□□□□ 0.15
PABPC1-219ENST00000522387 TRMT2AQ8IZ69 625 aaKnown RBP16■□□□□ 0.15
PABPC1-219ENST00000522387 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
PABPC1-219ENST00000522387 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
PABPC1-219ENST00000522387 ZNF496Q96IT1 587 aaPredicted RBP15.99■□□□□ 0.15
PABPC1-219ENST00000522387 GOLGB1Q14789 3259 aaKnown RBP15.99■□□□□ 0.15
PABPC1-219ENST00000522387 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
PABPC1-219ENST00000522387 ATG3Q9NT62 314 aa15.99■□□□□ 0.15
PABPC1-219ENST00000522387 ITGB4P16144 1822 aa15.98■□□□□ 0.15
PABPC1-219ENST00000522387 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
PABPC1-219ENST00000522387 TWISTNBQ3B726 338 aaPredicted RBP15.97■□□□□ 0.15
PABPC1-219ENST00000522387 PIP4K2AP48426 406 aaPredicted RBP15.97■□□□□ 0.15
PABPC1-219ENST00000522387 FAM196AQ6ZSG2 479 aa15.97■□□□□ 0.15
PABPC1-219ENST00000522387 BCL9O00512 1426 aa15.97■□□□□ 0.15
PABPC1-219ENST00000522387 ADAMTS7Q9UKP4 1686 aa15.96■□□□□ 0.15
PABPC1-219ENST00000522387 BCAR3O75815 825 aa15.95■□□□□ 0.14
PABPC1-219ENST00000522387 SIPA1L3O60292 1781 aaPredicted RBP15.95■□□□□ 0.14
PABPC1-219ENST00000522387 ANXA1P04083 346 aa15.94■□□□□ 0.14
PABPC1-219ENST00000522387 MRC1P22897 1456 aa15.93■□□□□ 0.14
PABPC1-219ENST00000522387 VAMP4O75379 141 aa15.93■□□□□ 0.14
PABPC1-219ENST00000522387 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
PABPC1-219ENST00000522387 USP16Q9Y5T5 823 aa15.93■□□□□ 0.14
PABPC1-219ENST00000522387 PLIN1O60240 522 aa15.93■□□□□ 0.14
PABPC1-219ENST00000522387 GIGYF1O75420 1035 aaPredicted RBP15.93■□□□□ 0.14
PABPC1-219ENST00000522387 FMNL2Q96PY5 1086 aa15.93■□□□□ 0.14
PABPC1-219ENST00000522387 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
PABPC1-219ENST00000522387 RBM19Q9Y4C8 960 aaKnown RBP15.91■□□□□ 0.14
PABPC1-219ENST00000522387 PALLDQ8WX93 1383 aa15.91■□□□□ 0.14
PABPC1-219ENST00000522387 ATP6V1AP38606 617 aa15.91■□□□□ 0.14
PABPC1-219ENST00000522387 FRAT1Q92837 279 aaPredicted RBP15.91■□□□□ 0.14
PABPC1-219ENST00000522387 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
PABPC1-219ENST00000522387 SBF2Q86WG5 1849 aa15.91■□□□□ 0.14
PABPC1-219ENST00000522387 KDM3BQ7LBC6 1761 aa15.91■□□□□ 0.14
PABPC1-219ENST00000522387 APBA3O96018 575 aa15.9■□□□□ 0.14
PABPC1-219ENST00000522387 HDGFL1Q5TGJ6 251 aa15.9■□□□□ 0.14
PABPC1-219ENST00000522387 SSH1Q8WYL5 1049 aa15.9■□□□□ 0.14
PABPC1-219ENST00000522387 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
PABPC1-219ENST00000522387 SMC4Q9NTJ3 1288 aa15.9■□□□□ 0.14
PABPC1-219ENST00000522387 DNAJC10Q8IXB1 793 aa15.9■□□□□ 0.14
PABPC1-219ENST00000522387 BABAM1Q9NWV8 329 aa15.9■□□□□ 0.14
PABPC1-219ENST00000522387 LOC102724428A0A0B4J2F2 783 aa15.89■□□□□ 0.13
PABPC1-219ENST00000522387 MYL6BP14649 208 aa15.89■□□□□ 0.13
PABPC1-219ENST00000522387 RARSP54136 660 aaKnown RBP15.89■□□□□ 0.13
PABPC1-219ENST00000522387 SIK1P57059 783 aa15.89■□□□□ 0.13
PABPC1-219ENST00000522387 SNRPA1P09661 255 aaKnown RBP15.89■□□□□ 0.13
PABPC1-219ENST00000522387 BTAF1O14981 1849 aa15.88■□□□□ 0.13
PABPC1-219ENST00000522387 A1BGP04217 495 aa15.88■□□□□ 0.13
PABPC1-219ENST00000522387 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
PABPC1-219ENST00000522387 SMIM5Q71RC9 77 aa15.88■□□□□ 0.13
PABPC1-219ENST00000522387 CHPF2Q9P2E5 772 aa15.88■□□□□ 0.13
PABPC1-219ENST00000522387 HEG1Q9ULI3 1381 aa15.88■□□□□ 0.13
PABPC1-219ENST00000522387 PROSER3Q2NL68 480 aa15.88■□□□□ 0.13
PABPC1-219ENST00000522387 KCPQ6ZWJ8 1503 aa15.87■□□□□ 0.13
PABPC1-219ENST00000522387 ARXQ96QS3 562 aa15.87■□□□□ 0.13
PABPC1-219ENST00000522387 ITPK1Q13572 414 aa15.86■□□□□ 0.13
PABPC1-219ENST00000522387 ZNF428Q96B54 188 aa15.86■□□□□ 0.13
PABPC1-219ENST00000522387 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms