RNA–Protein interactions for RNA: ENST00000522246.5

CD74-208, Transcript of CD74 molecule, humanhuman

TSL 4

Gene CD74, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-208ENST00000522246 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
CD74-208ENST00000522246 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
CD74-208ENST00000522246 NFATC2IPQ8NCF5 419 aa13.65□□□□□ -0.22
CD74-208ENST00000522246 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
CD74-208ENST00000522246 TNS2Q63HR2 1409 aa13.64□□□□□ -0.23
CD74-208ENST00000522246 LRRC37A3O60309 1634 aa13.64□□□□□ -0.23
CD74-208ENST00000522246 HOXB7P09629 217 aa13.64□□□□□ -0.23
CD74-208ENST00000522246 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
CD74-208ENST00000522246 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
CD74-208ENST00000522246 WNK3Q9BYP7 1800 aa13.63□□□□□ -0.23
CD74-208ENST00000522246 BRPF1P55201 1214 aaPredicted RBP13.63□□□□□ -0.23
CD74-208ENST00000522246 C8orf58Q8NAV2 365 aa13.63□□□□□ -0.23
CD74-208ENST00000522246 MS4A1P11836 297 aa13.62□□□□□ -0.23
CD74-208ENST00000522246 RRP1P56182 461 aaKnown RBP13.62□□□□□ -0.23
CD74-208ENST00000522246 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
CD74-208ENST00000522246 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
CD74-208ENST00000522246 ZNF790Q6PG37 636 aa13.62□□□□□ -0.23
CD74-208ENST00000522246 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
CD74-208ENST00000522246 TMOD3Q9NYL9 352 aa13.62□□□□□ -0.23
CD74-208ENST00000522246 KAT6BQ8WYB5 2073 aa13.61□□□□□ -0.23
CD74-208ENST00000522246 IPO8O15397 1037 aaKnown RBP13.61□□□□□ -0.23
CD74-208ENST00000522246 RBM6P78332 1123 aaKnown RBP13.61□□□□□ -0.23
CD74-208ENST00000522246 MRC1P22897 1456 aa13.61□□□□□ -0.23
CD74-208ENST00000522246 A0A0G2JS52 829 aa13.6□□□□□ -0.23
CD74-208ENST00000522246 ELL2O00472 640 aaPredicted RBP13.6□□□□□ -0.23
CD74-208ENST00000522246 MYT1Q01538 1121 aa13.6□□□□□ -0.23
CD74-208ENST00000522246 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
CD74-208ENST00000522246 TSPYL6Q8N831 410 aa13.6□□□□□ -0.23
CD74-208ENST00000522246 MARCH10Q8NA82 808 aaPredicted RBP13.6□□□□□ -0.23
CD74-208ENST00000522246 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
CD74-208ENST00000522246 SHANK3Q9BYB0 1731 aa13.6□□□□□ -0.23
CD74-208ENST00000522246 SMC4Q9NTJ3 1288 aa13.6□□□□□ -0.23
CD74-208ENST00000522246 SIPA1L3O60292 1781 aaPredicted RBP13.6□□□□□ -0.23
CD74-208ENST00000522246 BCAR3O75815 825 aa13.59□□□□□ -0.23
CD74-208ENST00000522246 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
CD74-208ENST00000522246 CANXP27824 592 aaKnown RBP13.58□□□□□ -0.24
CD74-208ENST00000522246 SEPT12Q8IYM1 358 aa13.58□□□□□ -0.24
CD74-208ENST00000522246 ARHGAP45Q92619 1136 aa13.58□□□□□ -0.24
CD74-208ENST00000522246 STK31Q9BXU1 1019 aa13.58□□□□□ -0.24
CD74-208ENST00000522246 KIF16BQ96L93 1317 aa13.58□□□□□ -0.24
CD74-208ENST00000522246 KDM3BQ7LBC6 1761 aa13.58□□□□□ -0.24
CD74-208ENST00000522246 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
CD74-208ENST00000522246 GIGYF1O75420 1035 aaPredicted RBP13.57□□□□□ -0.24
CD74-208ENST00000522246 SNRPA1P09661 255 aaKnown RBP13.57□□□□□ -0.24
CD74-208ENST00000522246 PDE3AQ14432 1141 aa13.57□□□□□ -0.24
CD74-208ENST00000522246 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
CD74-208ENST00000522246 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
CD74-208ENST00000522246 PIGBQ92521 554 aa13.57□□□□□ -0.24
CD74-208ENST00000522246 TEX13AQ9BXU3 409 aaPredicted RBP13.57□□□□□ -0.24
CD74-208ENST00000522246 CACNA1FO60840 1977 aa13.57□□□□□ -0.24
CD74-208ENST00000522246 GLI3P10071 1580 aa13.57□□□□□ -0.24
CD74-208ENST00000522246 KCNQ3O43525 872 aa13.56□□□□□ -0.24
CD74-208ENST00000522246 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
CD74-208ENST00000522246 SLC39A6Q13433 755 aa13.56□□□□□ -0.24
CD74-208ENST00000522246 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
CD74-208ENST00000522246 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
CD74-208ENST00000522246 BCL9O00512 1426 aa13.56□□□□□ -0.24
CD74-208ENST00000522246 RXRBP28702 533 aa13.55□□□□□ -0.24
CD74-208ENST00000522246 FKBP8Q14318 412 aa13.55□□□□□ -0.24
CD74-208ENST00000522246 KRT24Q2M2I5 525 aa13.55□□□□□ -0.24
CD74-208ENST00000522246 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
CD74-208ENST00000522246 SMARCC1Q92922 1105 aaPredicted RBP13.55□□□□□ -0.24
CD74-208ENST00000522246 THSD7AQ9UPZ6 1657 aa13.55□□□□□ -0.24
CD74-208ENST00000522246 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
CD74-208ENST00000522246 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
CD74-208ENST00000522246 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
CD74-208ENST00000522246 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
CD74-208ENST00000522246 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
CD74-208ENST00000522246 NOB1Q9ULX3 412 aaKnown RBP13.54□□□□□ -0.24
CD74-208ENST00000522246 PLIN1O60240 522 aa13.53□□□□□ -0.24
CD74-208ENST00000522246 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
CD74-208ENST00000522246 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
CD74-208ENST00000522246 ATG3Q9NT62 314 aa13.53□□□□□ -0.24
CD74-208ENST00000522246 DBF4Q9UBU7 674 aaPredicted RBP13.53□□□□□ -0.24
CD74-208ENST00000522246 PTPRCP08575 1304 aa13.53□□□□□ -0.24
CD74-208ENST00000522246 ITGB4P16144 1822 aa13.53□□□□□ -0.24
CD74-208ENST00000522246 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.25
CD74-208ENST00000522246 AAMPQ13685 434 aa13.52□□□□□ -0.25
CD74-208ENST00000522246 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.25
CD74-208ENST00000522246 KRT27Q7Z3Y8 459 aa13.52□□□□□ -0.25
CD74-208ENST00000522246 CHMP4BQ9H444 224 aaKnown RBP13.52□□□□□ -0.25
CD74-208ENST00000522246 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
CD74-208ENST00000522246 HMGB2P26583 209 aaKnown RBP13.51□□□□□ -0.25
CD74-208ENST00000522246 FTSJ3Q8IY81 847 aaKnown RBP13.51□□□□□ -0.25
CD74-208ENST00000522246 DZIP1LQ8IYY4 767 aaKnown RBP13.51□□□□□ -0.25
CD74-208ENST00000522246 ACSBG1Q96GR2 724 aa13.51□□□□□ -0.25
CD74-208ENST00000522246 HYPKQ9NX55 129 aa13.51□□□□□ -0.25
CD74-208ENST00000522246 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
CD74-208ENST00000522246 TOGARAM1Q9Y4F4 1720 aa13.5□□□□□ -0.25
CD74-208ENST00000522246 STARD3NLO95772 234 aa13.5□□□□□ -0.25
CD74-208ENST00000522246 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
CD74-208ENST00000522246 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
CD74-208ENST00000522246 PTCD1O75127 700 aaKnown RBP13.49□□□□□ -0.25
CD74-208ENST00000522246 RBM42Q9BTD8 480 aaKnown RBP13.49□□□□□ -0.25
CD74-208ENST00000522246 TRIM27P14373 513 aa13.48□□□□□ -0.25
CD74-208ENST00000522246 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
CD74-208ENST00000522246 USP16Q9Y5T5 823 aa13.48□□□□□ -0.25
CD74-208ENST00000522246 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
CD74-208ENST00000522246 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
CD74-208ENST00000522246 PAPPAQ13219 1627 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms