RNA–Protein interactions for RNA: ENST00000522137.1

SMIM20-204, Transcript of small integral membrane protein 20, humanhuman

TSL 2

Gene SMIM20, Length 427 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-204ENST00000522137 KIAA1024Q9UPX6 916 aa9.48□□□□□ -0.89
SMIM20-204ENST00000522137 FAM196BA6NMK8 535 aa9.47□□□□□ -0.89
SMIM20-204ENST00000522137 TLR1Q15399 786 aa9.47□□□□□ -0.89
SMIM20-204ENST00000522137 PRICKLE2Q7Z3G6 844 aa9.47□□□□□ -0.89
SMIM20-204ENST00000522137 SIX5Q8N196 739 aa9.47□□□□□ -0.89
SMIM20-204ENST00000522137 ZNF594Q96JF6 807 aaPredicted RBP9.47□□□□□ -0.89
SMIM20-204ENST00000522137 SLC4A9Q96Q91 983 aa9.47□□□□□ -0.89
SMIM20-204ENST00000522137 ZSCAN10Q96SZ4 725 aaPredicted RBP9.47□□□□□ -0.89
SMIM20-204ENST00000522137 FHDC1Q9C0D6 1143 aaPredicted RBP9.47□□□□□ -0.89
SMIM20-204ENST00000522137 SERTAD1Q9UHV2 236 aa9.47□□□□□ -0.89
SMIM20-204ENST00000522137 SMTNP53814 917 aa9.46□□□□□ -0.9
SMIM20-204ENST00000522137 PTK7Q13308 1070 aa9.46□□□□□ -0.9
SMIM20-204ENST00000522137 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMIM20-204ENST00000522137 ZNF358Q9NW07 568 aa9.46□□□□□ -0.9
SMIM20-204ENST00000522137 CRTC2Q53ET0 693 aaPredicted RBP9.45□□□□□ -0.9
SMIM20-204ENST00000522137 CDCA8Q53HL2 280 aa9.45□□□□□ -0.9
SMIM20-204ENST00000522137 TMEM214Q6NUQ4 689 aaKnown RBP9.45□□□□□ -0.9
SMIM20-204ENST00000522137 SPATA31C2B4DYI2 1134 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L15C9J2P7 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L10C9JJH3 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L13C9JLJ4 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L12C9JPN9 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L11C9JVI0 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L21D6R901 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L18D6R9N7 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L22D6RA61 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L17D6RBQ6 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 WDR44Q5JSH3 913 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 GNASQ5JWF2 1037 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 PBXIP1Q96AQ6 731 aa9.44□□□□□ -0.9
SMIM20-204ENST00000522137 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.43□□□□□ -0.9
SMIM20-204ENST00000522137 A6NJY4 79 aa9.43□□□□□ -0.9
SMIM20-204ENST00000522137 M0R2N6 131 aa9.43□□□□□ -0.9
SMIM20-204ENST00000522137 DKK1O94907 266 aa9.43□□□□□ -0.9
SMIM20-204ENST00000522137 SEC13P55735 322 aa9.43□□□□□ -0.9
SMIM20-204ENST00000522137 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
SMIM20-204ENST00000522137 PTSQ03393 145 aa9.43□□□□□ -0.9
SMIM20-204ENST00000522137 POU4F2Q12837 409 aa9.43□□□□□ -0.9
SMIM20-204ENST00000522137 MTFR1Q15390 333 aa9.43□□□□□ -0.9
SMIM20-204ENST00000522137 PPARGC1BQ86YN6 1023 aaKnown RBP9.43□□□□□ -0.9
SMIM20-204ENST00000522137 ANKMY2Q8IV38 441 aa9.43□□□□□ -0.9
SMIM20-204ENST00000522137 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
SMIM20-204ENST00000522137 RHOQP17081 205 aa9.42□□□□□ -0.9
SMIM20-204ENST00000522137 DPYDQ12882 1025 aa9.42□□□□□ -0.9
SMIM20-204ENST00000522137 NBPF10Q6P3W6 841 aaKnown RBP9.42□□□□□ -0.9
SMIM20-204ENST00000522137 TAS1R3Q7RTX0 852 aa9.42□□□□□ -0.9
SMIM20-204ENST00000522137 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
SMIM20-204ENST00000522137 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
SMIM20-204ENST00000522137 SFI1A8K8P3 1242 aa9.41□□□□□ -0.9
SMIM20-204ENST00000522137 NPAS3Q8IXF0 933 aa9.41□□□□□ -0.9
SMIM20-204ENST00000522137 RHBDD1Q8TEB9 315 aa9.41□□□□□ -0.9
SMIM20-204ENST00000522137 SLC35F4A4IF30 521 aa9.4□□□□□ -0.9
SMIM20-204ENST00000522137 ATG7O95352 703 aa9.4□□□□□ -0.9
SMIM20-204ENST00000522137 FAM200AQ8TCP9 573 aa9.4□□□□□ -0.9
SMIM20-204ENST00000522137 SCHIP1Q9P0W5 487 aaPredicted RBP9.4□□□□□ -0.9
SMIM20-204ENST00000522137 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
SMIM20-204ENST00000522137 EPHA4P54764 986 aa9.39□□□□□ -0.91
SMIM20-204ENST00000522137 ELOAQ14241 798 aaKnown RBP9.39□□□□□ -0.91
SMIM20-204ENST00000522137 TNS4Q8IZW8 715 aa9.39□□□□□ -0.91
SMIM20-204ENST00000522137 CCDC155Q8N6L0 562 aa9.39□□□□□ -0.91
SMIM20-204ENST00000522137 NIFKQ9BYG3 293 aaKnown RBP9.39□□□□□ -0.91
SMIM20-204ENST00000522137 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
SMIM20-204ENST00000522137 TERTO14746 1132 aaKnown RBP9.38□□□□□ -0.91
SMIM20-204ENST00000522137 C4orf17Q53FE4 359 aa9.38□□□□□ -0.91
SMIM20-204ENST00000522137 TSEN2Q8NCE0 465 aaKnown RBP9.38□□□□□ -0.91
SMIM20-204ENST00000522137 ZNF775Q96BV0 537 aaPredicted RBP9.38□□□□□ -0.91
SMIM20-204ENST00000522137 ARXQ96QS3 562 aa9.38□□□□□ -0.91
SMIM20-204ENST00000522137 TIMMDC1Q9NPL8 285 aa9.38□□□□□ -0.91
SMIM20-204ENST00000522137 NOVA2Q9UNW9 492 aaKnown RBP9.38□□□□□ -0.91
SMIM20-204ENST00000522137 IQSEC3Q9UPP2 1182 aaPredicted RBP9.38□□□□□ -0.91
SMIM20-204ENST00000522137 DYRK1BQ9Y463 629 aa9.38□□□□□ -0.91
SMIM20-204ENST00000522137 PPFIA3O75145 1194 aa9.37□□□□□ -0.91
SMIM20-204ENST00000522137 PHKA2P46019 1235 aa9.37□□□□□ -0.91
SMIM20-204ENST00000522137 FOXK2Q01167 660 aa9.37□□□□□ -0.91
SMIM20-204ENST00000522137 ARID3AQ99856 593 aa9.37□□□□□ -0.91
SMIM20-204ENST00000522137 SLC16A10Q8TF71 515 aa9.36□□□□□ -0.91
SMIM20-204ENST00000522137 HINFPQ9BQA5 517 aa9.36□□□□□ -0.91
SMIM20-204ENST00000522137 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
SMIM20-204ENST00000522137 H3BM21 787 aa9.35□□□□□ -0.91
SMIM20-204ENST00000522137 SLC9A9Q8IVB4 645 aa9.35□□□□□ -0.91
SMIM20-204ENST00000522137 CABP1Q9NZU7 370 aa9.35□□□□□ -0.91
SMIM20-204ENST00000522137 A0A1B0GTH6 734 aa9.34□□□□□ -0.91
SMIM20-204ENST00000522137 PLA2G4AP47712 749 aa9.34□□□□□ -0.91
SMIM20-204ENST00000522137 ZNF295-AS1Q8N0V1 137 aa9.34□□□□□ -0.91
SMIM20-204ENST00000522137 GAS2L1Q99501 681 aaPredicted RBP9.34□□□□□ -0.91
SMIM20-204ENST00000522137 TSPAN10Q9H1Z9 355 aaPredicted RBP9.34□□□□□ -0.91
SMIM20-204ENST00000522137 USP3Q9Y6I4 520 aa9.34□□□□□ -0.91
SMIM20-204ENST00000522137 F11P03951 625 aa9.33□□□□□ -0.92
SMIM20-204ENST00000522137 ITGA6P23229 1130 aa9.33□□□□□ -0.92
SMIM20-204ENST00000522137 VEGFBP49765 207 aa9.33□□□□□ -0.92
SMIM20-204ENST00000522137 TEAD4Q15561 434 aa9.33□□□□□ -0.92
SMIM20-204ENST00000522137 GAS2L2Q8NHY3 880 aa9.33□□□□□ -0.92
SMIM20-204ENST00000522137 ZMIZ1Q9ULJ6 1067 aa9.33□□□□□ -0.92
SMIM20-204ENST00000522137 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
SMIM20-204ENST00000522137 PSMA6P60900 246 aaKnown RBP9.32□□□□□ -0.92
SMIM20-204ENST00000522137 NFX1Q12986 1120 aaKnown RBP9.32□□□□□ -0.92
SMIM20-204ENST00000522137 NBPF1Q3BBV0 1214 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms