RNA–Protein interactions for RNA: ENST00000522107.1

IGHV3-50-201, Transcript of immunoglobulin heavy variable 3-50 (pseudogene), humanhuman

BASIC

Gene IGHV3-50, Length 317 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-50-201ENST00000522107 C5P01031 1676 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 ZBTB7AO95365 584 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 PTGER2P43116 358 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 SIK1P57059 783 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 RALBP1Q15311 655 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 CFAP53Q96M91 514 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 SGIP1Q9BQI5 828 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 STK32BQ9NY57 414 aa12.64□□□□□ -0.39
IGHV3-50-201ENST00000522107 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
IGHV3-50-201ENST00000522107 C1orf141Q5JVX7 400 aa12.63□□□□□ -0.39
IGHV3-50-201ENST00000522107 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 FCHSD2O94868 740 aa12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 HSP90AB1P08238 724 aaKnown RBP12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 CABP4P57796 275 aa12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 COL23A1Q86Y22 540 aaPredicted RBP12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 SLC52A2Q9HAB3 445 aa12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 KCPQ6ZWJ8 1503 aa12.62□□□□□ -0.39
IGHV3-50-201ENST00000522107 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
IGHV3-50-201ENST00000522107 CEMIPQ8WUJ3 1361 aa12.61□□□□□ -0.39
IGHV3-50-201ENST00000522107 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
IGHV3-50-201ENST00000522107 DCTN1Q14203 1278 aa12.61□□□□□ -0.39
IGHV3-50-201ENST00000522107 SMARCC1Q92922 1105 aaPredicted RBP12.61□□□□□ -0.39
IGHV3-50-201ENST00000522107 ATF5Q9Y2D1 282 aaPredicted RBP12.61□□□□□ -0.39
IGHV3-50-201ENST00000522107 MYH14Q7Z406 1995 aaKnown RBP12.61□□□□□ -0.39
IGHV3-50-201ENST00000522107 TJP1Q07157 1748 aa12.6□□□□□ -0.39
IGHV3-50-201ENST00000522107 GOLGB1Q14789 3259 aaKnown RBP12.6□□□□□ -0.39
IGHV3-50-201ENST00000522107 KCNQ3O43525 872 aa12.6□□□□□ -0.39
IGHV3-50-201ENST00000522107 NUDCQ9Y266 331 aa12.6□□□□□ -0.39
IGHV3-50-201ENST00000522107 COL5A3P25940 1745 aaPredicted RBP12.59□□□□□ -0.39
IGHV3-50-201ENST00000522107 COL24A1Q17RW2 1714 aa12.59□□□□□ -0.39
IGHV3-50-201ENST00000522107 UBR3Q6ZT12 1888 aa12.59□□□□□ -0.39
IGHV3-50-201ENST00000522107 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
IGHV3-50-201ENST00000522107 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
IGHV3-50-201ENST00000522107 MCM10Q7L590 875 aa12.59□□□□□ -0.39
IGHV3-50-201ENST00000522107 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
IGHV3-50-201ENST00000522107 ZNF831Q5JPB2 1677 aa12.58□□□□□ -0.4
IGHV3-50-201ENST00000522107 GNAT3A8MTJ3 354 aa12.58□□□□□ -0.4
IGHV3-50-201ENST00000522107 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.4
IGHV3-50-201ENST00000522107 TFCP2L1Q9NZI6 479 aa12.58□□□□□ -0.4
IGHV3-50-201ENST00000522107 DLG5Q8TDM6 1919 aa12.57□□□□□ -0.4
IGHV3-50-201ENST00000522107 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
IGHV3-50-201ENST00000522107 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
IGHV3-50-201ENST00000522107 CICQ96RK0 1608 aaPredicted RBP12.57□□□□□ -0.4
IGHV3-50-201ENST00000522107 DNAJC10Q8IXB1 793 aa12.56□□□□□ -0.4
IGHV3-50-201ENST00000522107 SPON1Q9HCB6 807 aa12.56□□□□□ -0.4
IGHV3-50-201ENST00000522107 PRAMEF22A3QJZ6 481 aa12.55□□□□□ -0.4
IGHV3-50-201ENST00000522107 INTS5Q6P9B9 1019 aaKnown RBP12.55□□□□□ -0.4
IGHV3-50-201ENST00000522107 CCDC146Q8IYE0 955 aa12.55□□□□□ -0.4
IGHV3-50-201ENST00000522107 ZNF496Q96IT1 587 aaPredicted RBP12.55□□□□□ -0.4
IGHV3-50-201ENST00000522107 MTFR1LQ9H019 292 aa12.55□□□□□ -0.4
IGHV3-50-201ENST00000522107 ADAMTS8Q9UP79 889 aa12.55□□□□□ -0.4
IGHV3-50-201ENST00000522107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.54□□□□□ -0.4
IGHV3-50-201ENST00000522107 PHF14O94880 888 aa12.54□□□□□ -0.4
IGHV3-50-201ENST00000522107 NFE2L2Q16236 605 aa12.54□□□□□ -0.4
IGHV3-50-201ENST00000522107 MSL1Q68DK7 614 aa12.54□□□□□ -0.4
IGHV3-50-201ENST00000522107 CNTNAP4Q9C0A0 1308 aa12.54□□□□□ -0.4
IGHV3-50-201ENST00000522107 GNPATO15228 680 aa12.53□□□□□ -0.4
IGHV3-50-201ENST00000522107 CYP19A1P11511 503 aaPredicted RBP12.53□□□□□ -0.4
IGHV3-50-201ENST00000522107 CRKLP46109 303 aaKnown RBP12.53□□□□□ -0.4
IGHV3-50-201ENST00000522107 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
IGHV3-50-201ENST00000522107 RC3H1Q5TC82 1133 aaKnown RBP12.52□□□□□ -0.41
IGHV3-50-201ENST00000522107 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
IGHV3-50-201ENST00000522107 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.41
IGHV3-50-201ENST00000522107 AK7Q96M32 723 aa12.52□□□□□ -0.41
IGHV3-50-201ENST00000522107 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.41
IGHV3-50-201ENST00000522107 SSFA2P28290 1259 aa12.51□□□□□ -0.41
IGHV3-50-201ENST00000522107 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
IGHV3-50-201ENST00000522107 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
IGHV3-50-201ENST00000522107 ZBTB1Q9Y2K1 713 aa12.51□□□□□ -0.41
IGHV3-50-201ENST00000522107 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 HTATSF1O43719 755 aaKnown RBP12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 RPS6KA4O75676 772 aa12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 TEFQ10587 303 aa12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 SLC16A10Q8TF71 515 aa12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 FHDC1Q9C0D6 1143 aaPredicted RBP12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 SRP68Q9UHB9 627 aaKnown RBP12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 C4AP0C0L4 1744 aa12.5□□□□□ -0.41
IGHV3-50-201ENST00000522107 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
IGHV3-50-201ENST00000522107 SENP3-EIF4A1A0A087X0R7 540 aa12.49□□□□□ -0.41
IGHV3-50-201ENST00000522107 MSH5O43196 834 aa12.49□□□□□ -0.41
IGHV3-50-201ENST00000522107 ARXQ96QS3 562 aa12.49□□□□□ -0.41
IGHV3-50-201ENST00000522107 KDM3BQ7LBC6 1761 aa12.48□□□□□ -0.41
IGHV3-50-201ENST00000522107 GYS1P13807 737 aa12.48□□□□□ -0.41
IGHV3-50-201ENST00000522107 RIPK4P57078 832 aa12.48□□□□□ -0.41
IGHV3-50-201ENST00000522107 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
IGHV3-50-201ENST00000522107 PNISRQ8TF01 805 aaKnown RBP12.48□□□□□ -0.41
IGHV3-50-201ENST00000522107 SYT17Q9BSW7 474 aa12.48□□□□□ -0.41
IGHV3-50-201ENST00000522107 BCL2L12Q9HB09 334 aa12.48□□□□□ -0.41
IGHV3-50-201ENST00000522107 USP16Q9Y5T5 823 aa12.48□□□□□ -0.41
IGHV3-50-201ENST00000522107 A1BGP04217 495 aa12.47□□□□□ -0.41
IGHV3-50-201ENST00000522107 PIP4K2AP48426 406 aaPredicted RBP12.47□□□□□ -0.41
IGHV3-50-201ENST00000522107 NLGN2Q8NFZ4 835 aa12.47□□□□□ -0.41
IGHV3-50-201ENST00000522107 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
IGHV3-50-201ENST00000522107 RUNDC1Q96C34 613 aa12.47□□□□□ -0.41
IGHV3-50-201ENST00000522107 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms