RNA–Protein interactions for RNA: ENST00000522008.1

CHRNA2-209, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 4

Gene CHRNA2, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-209ENST00000522008 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
CHRNA2-209ENST00000522008 MARCH10Q8NA82 808 aaPredicted RBP13.09□□□□□ -0.31
CHRNA2-209ENST00000522008 NFATC2IPQ8NCF5 419 aa13.09□□□□□ -0.31
CHRNA2-209ENST00000522008 THSD7AQ9UPZ6 1657 aa13.08□□□□□ -0.31
CHRNA2-209ENST00000522008 KDM6AO15550 1401 aaPredicted RBP13.08□□□□□ -0.32
CHRNA2-209ENST00000522008 ZNF428Q96B54 188 aa13.08□□□□□ -0.32
CHRNA2-209ENST00000522008 CHMP4AQ9BY43 222 aa13.08□□□□□ -0.32
CHRNA2-209ENST00000522008 MBIPQ9NS73 344 aa13.08□□□□□ -0.32
CHRNA2-209ENST00000522008 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
CHRNA2-209ENST00000522008 LRRC37A3O60309 1634 aa13.08□□□□□ -0.32
CHRNA2-209ENST00000522008 SOS1Q07889 1333 aaPredicted RBP13.07□□□□□ -0.32
CHRNA2-209ENST00000522008 FANCIQ9NVI1 1328 aa13.07□□□□□ -0.32
CHRNA2-209ENST00000522008 BCL9O00512 1426 aa13.06□□□□□ -0.32
CHRNA2-209ENST00000522008 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
CHRNA2-209ENST00000522008 SIPA1L3O60292 1781 aaPredicted RBP13.05□□□□□ -0.32
CHRNA2-209ENST00000522008 KRT27Q7Z3Y8 459 aa13.05□□□□□ -0.32
CHRNA2-209ENST00000522008 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
CHRNA2-209ENST00000522008 MRC1P22897 1456 aa13.04□□□□□ -0.32
CHRNA2-209ENST00000522008 EXOSC9Q06265 439 aaKnown RBP13.04□□□□□ -0.32
CHRNA2-209ENST00000522008 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
CHRNA2-209ENST00000522008 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
CHRNA2-209ENST00000522008 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
CHRNA2-209ENST00000522008 HOXB7P09629 217 aa13.03□□□□□ -0.32
CHRNA2-209ENST00000522008 EIF4A1P60842 406 aaKnown RBP13.03□□□□□ -0.32
CHRNA2-209ENST00000522008 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
CHRNA2-209ENST00000522008 VAMP4O75379 141 aa13.02□□□□□ -0.33
CHRNA2-209ENST00000522008 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.33
CHRNA2-209ENST00000522008 TWISTNBQ3B726 338 aaPredicted RBP13.02□□□□□ -0.33
CHRNA2-209ENST00000522008 ALDH1L2Q3SY69 923 aa13.02□□□□□ -0.33
CHRNA2-209ENST00000522008 KDM3BQ7LBC6 1761 aa13.02□□□□□ -0.33
CHRNA2-209ENST00000522008 ITGB4P16144 1822 aa13.02□□□□□ -0.33
CHRNA2-209ENST00000522008 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
CHRNA2-209ENST00000522008 PIGBQ92521 554 aa13.01□□□□□ -0.33
CHRNA2-209ENST00000522008 FMNL2Q96PY5 1086 aa13.01□□□□□ -0.33
CHRNA2-209ENST00000522008 RCAN3Q9UKA8 241 aa13.01□□□□□ -0.33
CHRNA2-209ENST00000522008 HEG1Q9ULI3 1381 aa13□□□□□ -0.33
CHRNA2-209ENST00000522008 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
CHRNA2-209ENST00000522008 C8orf58Q8NAV2 365 aa13□□□□□ -0.33
CHRNA2-209ENST00000522008 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
CHRNA2-209ENST00000522008 SYTL4Q96C24 671 aaPredicted RBP13□□□□□ -0.33
CHRNA2-209ENST00000522008 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
CHRNA2-209ENST00000522008 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
CHRNA2-209ENST00000522008 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
CHRNA2-209ENST00000522008 SLC39A6Q13433 755 aa12.99□□□□□ -0.33
CHRNA2-209ENST00000522008 ACSBG1Q96GR2 724 aa12.99□□□□□ -0.33
CHRNA2-209ENST00000522008 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
CHRNA2-209ENST00000522008 TOGARAM1Q9Y4F4 1720 aa12.99□□□□□ -0.33
CHRNA2-209ENST00000522008 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 ELL2O00472 640 aaPredicted RBP12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 KCNQ3O43525 872 aa12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 SNRPA1P09661 255 aaKnown RBP12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 TSPYL6Q8N831 410 aa12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
CHRNA2-209ENST00000522008 DOT1LQ8TEK3 1739 aa12.97□□□□□ -0.33
CHRNA2-209ENST00000522008 RARSP54136 660 aaKnown RBP12.97□□□□□ -0.33
CHRNA2-209ENST00000522008 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
CHRNA2-209ENST00000522008 ZNF496Q96IT1 587 aaPredicted RBP12.97□□□□□ -0.33
CHRNA2-209ENST00000522008 KCNQ2O43526 872 aa12.96□□□□□ -0.33
CHRNA2-209ENST00000522008 ASAP1Q9ULH1 1129 aa12.96□□□□□ -0.33
CHRNA2-209ENST00000522008 SBF2Q86WG5 1849 aa12.96□□□□□ -0.33
CHRNA2-209ENST00000522008 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
CHRNA2-209ENST00000522008 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
CHRNA2-209ENST00000522008 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
CHRNA2-209ENST00000522008 STK31Q9BXU1 1019 aa12.95□□□□□ -0.34
CHRNA2-209ENST00000522008 SUPT16HQ9Y5B9 1047 aaKnown RBP12.95□□□□□ -0.34
CHRNA2-209ENST00000522008 NHSQ6T4R5 1651 aa12.95□□□□□ -0.34
CHRNA2-209ENST00000522008 RGS12O14924 1447 aa12.95□□□□□ -0.34
CHRNA2-209ENST00000522008 PAPPAQ13219 1627 aa12.95□□□□□ -0.34
CHRNA2-209ENST00000522008 UBR2Q8IWV8 1755 aa12.94□□□□□ -0.34
CHRNA2-209ENST00000522008 IPO8O15397 1037 aaKnown RBP12.94□□□□□ -0.34
CHRNA2-209ENST00000522008 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
CHRNA2-209ENST00000522008 SSH1Q8WYL5 1049 aa12.94□□□□□ -0.34
CHRNA2-209ENST00000522008 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 RNF123Q5XPI4 1314 aa12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 PTCD1O75127 700 aaKnown RBP12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 MS4A1P11836 297 aa12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 EIF2S2P20042 333 aaKnown RBP12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 ARHGAP45Q92619 1136 aa12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 SMC4Q9NTJ3 1288 aa12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 USP16Q9Y5T5 823 aa12.93□□□□□ -0.34
CHRNA2-209ENST00000522008 BCAR3O75815 825 aa12.92□□□□□ -0.34
CHRNA2-209ENST00000522008 STARD3NLO95772 234 aa12.92□□□□□ -0.34
CHRNA2-209ENST00000522008 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
CHRNA2-209ENST00000522008 KCPQ6ZWJ8 1503 aa12.92□□□□□ -0.34
CHRNA2-209ENST00000522008 KIF16BQ96L93 1317 aa12.91□□□□□ -0.34
CHRNA2-209ENST00000522008 LOC102724428A0A0B4J2F2 783 aa12.91□□□□□ -0.34
CHRNA2-209ENST00000522008 PLSCR1O15162 318 aa12.91□□□□□ -0.34
CHRNA2-209ENST00000522008 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
CHRNA2-209ENST00000522008 SIK1P57059 783 aa12.91□□□□□ -0.34
CHRNA2-209ENST00000522008 HYPKQ9NX55 129 aa12.91□□□□□ -0.34
CHRNA2-209ENST00000522008 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
CHRNA2-209ENST00000522008 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
CHRNA2-209ENST00000522008 TRIM37O94972 964 aa12.9□□□□□ -0.34
CHRNA2-209ENST00000522008 RRP1P56182 461 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms