RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 TOM1L2Q6ZVM7 507 aa12.36□□□□□ -0.43
SHPRH-209ENST00000521977 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
SHPRH-209ENST00000521977 SGIP1Q9BQI5 828 aa12.36□□□□□ -0.43
SHPRH-209ENST00000521977 NWD2Q9ULI1 1742 aa12.35□□□□□ -0.43
SHPRH-209ENST00000521977 RRP1P56182 461 aaKnown RBP12.35□□□□□ -0.43
SHPRH-209ENST00000521977 EVA1CP58658 441 aa12.35□□□□□ -0.43
SHPRH-209ENST00000521977 ZNF530Q6P9A1 599 aaPredicted RBP12.35□□□□□ -0.43
SHPRH-209ENST00000521977 MBIPQ9NS73 344 aa12.35□□□□□ -0.43
SHPRH-209ENST00000521977 SLIT2O94813 1529 aa12.35□□□□□ -0.43
SHPRH-209ENST00000521977 SPATA31A6Q5VVP1 1343 aa12.35□□□□□ -0.43
SHPRH-209ENST00000521977 NEFLP07196 543 aa12.34□□□□□ -0.43
SHPRH-209ENST00000521977 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
SHPRH-209ENST00000521977 STRN4Q9NRL3 753 aa12.34□□□□□ -0.43
SHPRH-209ENST00000521977 BABAM1Q9NWV8 329 aa12.34□□□□□ -0.43
SHPRH-209ENST00000521977 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
SHPRH-209ENST00000521977 MAP3K13O43283 966 aa12.33□□□□□ -0.44
SHPRH-209ENST00000521977 RARSP54136 660 aaKnown RBP12.33□□□□□ -0.44
SHPRH-209ENST00000521977 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
SHPRH-209ENST00000521977 PELP1Q8IZL8 1130 aaKnown RBP12.33□□□□□ -0.44
SHPRH-209ENST00000521977 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.44
SHPRH-209ENST00000521977 DISP2A7MBM2 1401 aa12.33□□□□□ -0.44
SHPRH-209ENST00000521977 VIRMAQ69YN4 1812 aaKnown RBP12.32□□□□□ -0.44
SHPRH-209ENST00000521977 NUTM2BA6NNL0 878 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-209ENST00000521977 NUTM2EB1AL46 878 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-209ENST00000521977 RNMTO43148 476 aaKnown RBP12.32□□□□□ -0.44
SHPRH-209ENST00000521977 ADAMTS2O95450 1211 aa12.32□□□□□ -0.44
SHPRH-209ENST00000521977 IL2RBP14784 551 aa12.32□□□□□ -0.44
SHPRH-209ENST00000521977 PHKG2P15735 406 aa12.32□□□□□ -0.44
SHPRH-209ENST00000521977 HSPA1LP34931 641 aa12.32□□□□□ -0.44
SHPRH-209ENST00000521977 ERICH6BQ5W0A0 696 aa12.32□□□□□ -0.44
SHPRH-209ENST00000521977 NUTM2AQ8IVF1 878 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-209ENST00000521977 SLC39A7Q92504 469 aa12.32□□□□□ -0.44
SHPRH-209ENST00000521977 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
SHPRH-209ENST00000521977 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
SHPRH-209ENST00000521977 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
SHPRH-209ENST00000521977 LRP6O75581 1613 aa12.31□□□□□ -0.44
SHPRH-209ENST00000521977 C7P10643 843 aa12.31□□□□□ -0.44
SHPRH-209ENST00000521977 IFNL2Q8IZJ0 200 aa12.31□□□□□ -0.44
SHPRH-209ENST00000521977 LGR6Q9HBX8 967 aa12.31□□□□□ -0.44
SHPRH-209ENST00000521977 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
SHPRH-209ENST00000521977 SIPA1L3O60292 1781 aaPredicted RBP12.3□□□□□ -0.44
SHPRH-209ENST00000521977 SCN11AQ9UI33 1791 aa12.3□□□□□ -0.44
SHPRH-209ENST00000521977 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
SHPRH-209ENST00000521977 MRC1P22897 1456 aa12.3□□□□□ -0.44
SHPRH-209ENST00000521977 CYP27B1O15528 508 aa12.3□□□□□ -0.44
SHPRH-209ENST00000521977 VAMP4O75379 141 aa12.3□□□□□ -0.44
SHPRH-209ENST00000521977 BCAR3O75815 825 aa12.3□□□□□ -0.44
SHPRH-209ENST00000521977 TAF7Q15545 349 aaPredicted RBP12.3□□□□□ -0.44
SHPRH-209ENST00000521977 KDM3BQ7LBC6 1761 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 TIE1P35590 1138 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 ALDH1L2Q3SY69 923 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 FNBP4Q8N3X1 1017 aaPredicted RBP12.29□□□□□ -0.44
SHPRH-209ENST00000521977 TSPYL6Q8N831 410 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
SHPRH-209ENST00000521977 ZCRB1Q8TBF4 217 aaKnown RBP12.29□□□□□ -0.44
SHPRH-209ENST00000521977 TSPYL4Q9UJ04 414 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 THRAP3Q9Y2W1 955 aaKnown RBP12.29□□□□□ -0.44
SHPRH-209ENST00000521977 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 PCDH11XQ9BZA7 1347 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 PCDH11YQ9BZA8 1340 aa12.29□□□□□ -0.44
SHPRH-209ENST00000521977 BCL9LQ86UU0 1499 aa12.28□□□□□ -0.44
SHPRH-209ENST00000521977 PLIN1O60240 522 aa12.28□□□□□ -0.44
SHPRH-209ENST00000521977 HSP90AB1P08238 724 aaKnown RBP12.28□□□□□ -0.44
SHPRH-209ENST00000521977 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-209ENST00000521977 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-209ENST00000521977 NKX1-1Q15270 411 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-209ENST00000521977 TWISTNBQ3B726 338 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-209ENST00000521977 C8orf58Q8NAV2 365 aa12.28□□□□□ -0.44
SHPRH-209ENST00000521977 SPATA31A5Q5VU36 1347 aa12.28□□□□□ -0.44
SHPRH-209ENST00000521977 SPATA31A7Q8IWB4 1347 aa12.28□□□□□ -0.44
SHPRH-209ENST00000521977 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
SHPRH-209ENST00000521977 UNC5CLQ8IV45 518 aa12.27□□□□□ -0.45
SHPRH-209ENST00000521977 SSH1Q8WYL5 1049 aa12.27□□□□□ -0.45
SHPRH-209ENST00000521977 DCAF5Q96JK2 942 aa12.27□□□□□ -0.45
SHPRH-209ENST00000521977 MIS18AQ9NYP9 233 aa12.27□□□□□ -0.45
SHPRH-209ENST00000521977 SOS1Q07889 1333 aaPredicted RBP12.27□□□□□ -0.45
SHPRH-209ENST00000521977 VASPP50552 380 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-209ENST00000521977 TEFQ10587 303 aa12.26□□□□□ -0.45
SHPRH-209ENST00000521977 CDCA7Q9BWT1 371 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-209ENST00000521977 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
SHPRH-209ENST00000521977 METRNQ9UJH8 293 aa12.26□□□□□ -0.45
SHPRH-209ENST00000521977 VPS72Q15906 364 aa12.25□□□□□ -0.45
SHPRH-209ENST00000521977 KRT24Q2M2I5 525 aa12.25□□□□□ -0.45
SHPRH-209ENST00000521977 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
SHPRH-209ENST00000521977 C8orf37Q96NL8 207 aa12.25□□□□□ -0.45
SHPRH-209ENST00000521977 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
SHPRH-209ENST00000521977 TNS2Q63HR2 1409 aa12.25□□□□□ -0.45
SHPRH-209ENST00000521977 BTBD11A6QL63 1104 aa12.24□□□□□ -0.45
SHPRH-209ENST00000521977 ATN1P54259 1190 aaPredicted RBP12.24□□□□□ -0.45
SHPRH-209ENST00000521977 EIF4A1P60842 406 aaKnown RBP12.24□□□□□ -0.45
SHPRH-209ENST00000521977 PDE3AQ14432 1141 aa12.24□□□□□ -0.45
SHPRH-209ENST00000521977 C20orf194Q5TEA3 1177 aa12.24□□□□□ -0.45
SHPRH-209ENST00000521977 MRPL50Q8N5N7 158 aaKnown RBP12.24□□□□□ -0.45
SHPRH-209ENST00000521977 NGLY1Q96IV0 654 aa12.24□□□□□ -0.45
SHPRH-209ENST00000521977 BCL2L13Q9BXK5 485 aa12.24□□□□□ -0.45
SHPRH-209ENST00000521977 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
SHPRH-209ENST00000521977 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
SHPRH-209ENST00000521977 HEG1Q9ULI3 1381 aa12.24□□□□□ -0.45
SHPRH-209ENST00000521977 KIF16BQ96L93 1317 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms