RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 PHF14O94880 888 aa12.2□□□□□ -0.46
CTNNA1-229ENST00000521683 ITPK1Q13572 414 aa12.2□□□□□ -0.46
CTNNA1-229ENST00000521683 DCAF5Q96JK2 942 aa12.2□□□□□ -0.46
CTNNA1-229ENST00000521683 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
CTNNA1-229ENST00000521683 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
CTNNA1-229ENST00000521683 C1QTNF8P60827 252 aa12.19□□□□□ -0.46
CTNNA1-229ENST00000521683 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
CTNNA1-229ENST00000521683 PLEKHO1Q53GL0 409 aaPredicted RBP12.19□□□□□ -0.46
CTNNA1-229ENST00000521683 GNPATO15228 680 aa12.18□□□□□ -0.46
CTNNA1-229ENST00000521683 MORC1Q86VD1 984 aa12.18□□□□□ -0.46
CTNNA1-229ENST00000521683 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-229ENST00000521683 KDM6AO15550 1401 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-229ENST00000521683 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-229ENST00000521683 GIGYF1O75420 1035 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-229ENST00000521683 ZNF530Q6P9A1 599 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-229ENST00000521683 CCER1Q8TC90 406 aaPredicted RBP12.17□□□□□ -0.46
CTNNA1-229ENST00000521683 KNSTRNQ9Y448 316 aa12.17□□□□□ -0.46
CTNNA1-229ENST00000521683 CNTNAP4Q9C0A0 1308 aa12.16□□□□□ -0.46
CTNNA1-229ENST00000521683 RC3H1Q5TC82 1133 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-229ENST00000521683 SMIM5Q71RC9 77 aa12.16□□□□□ -0.46
CTNNA1-229ENST00000521683 ADCY9O60503 1353 aa12.16□□□□□ -0.46
CTNNA1-229ENST00000521683 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-229ENST00000521683 C1orf141Q5JVX7 400 aa12.15□□□□□ -0.46
CTNNA1-229ENST00000521683 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
CTNNA1-229ENST00000521683 RTCBQ9Y3I0 505 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-229ENST00000521683 KIF13BQ9NQT8 1826 aa12.15□□□□□ -0.46
CTNNA1-229ENST00000521683 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
CTNNA1-229ENST00000521683 SENP3-EIF4A1A0A087X0R7 540 aa12.14□□□□□ -0.47
CTNNA1-229ENST00000521683 CABP4P57796 275 aa12.14□□□□□ -0.47
CTNNA1-229ENST00000521683 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-229ENST00000521683 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
CTNNA1-229ENST00000521683 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-229ENST00000521683 MMP10P09238 476 aa12.13□□□□□ -0.47
CTNNA1-229ENST00000521683 IL13P35225 146 aa12.13□□□□□ -0.47
CTNNA1-229ENST00000521683 MTHFSP49914 203 aa12.13□□□□□ -0.47
CTNNA1-229ENST00000521683 TRAPPC3LQ5T215 181 aa12.13□□□□□ -0.47
CTNNA1-229ENST00000521683 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
CTNNA1-229ENST00000521683 NLGN1Q8N2Q7 840 aa12.13□□□□□ -0.47
CTNNA1-229ENST00000521683 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
CTNNA1-229ENST00000521683 RPS6KA4O75676 772 aa12.12□□□□□ -0.47
CTNNA1-229ENST00000521683 PXDNLA1KZ92 1463 aa12.12□□□□□ -0.47
CTNNA1-229ENST00000521683 SCN11AQ9UI33 1791 aa12.12□□□□□ -0.47
CTNNA1-229ENST00000521683 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-229ENST00000521683 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
CTNNA1-229ENST00000521683 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
CTNNA1-229ENST00000521683 KIAA1551Q9HCM1 1747 aa12.11□□□□□ -0.47
CTNNA1-229ENST00000521683 MRC1P22897 1456 aa12.11□□□□□ -0.47
CTNNA1-229ENST00000521683 GYS1P13807 737 aa12.11□□□□□ -0.47
CTNNA1-229ENST00000521683 TGFB2P61812 414 aa12.11□□□□□ -0.47
CTNNA1-229ENST00000521683 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-229ENST00000521683 RFC4P35249 363 aa12.1□□□□□ -0.47
CTNNA1-229ENST00000521683 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
CTNNA1-229ENST00000521683 TJP1Q07157 1748 aa12.1□□□□□ -0.47
CTNNA1-229ENST00000521683 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-229ENST00000521683 CRKLP46109 303 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-229ENST00000521683 NFATC2IPQ8NCF5 419 aa12.09□□□□□ -0.47
CTNNA1-229ENST00000521683 GPBP1L1Q9HC44 474 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-229ENST00000521683 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
CTNNA1-229ENST00000521683 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
CTNNA1-229ENST00000521683 PER1O15534 1290 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-229ENST00000521683 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
CTNNA1-229ENST00000521683 USP42Q9H9J4 1324 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-229ENST00000521683 NPC1L1Q9UHC9 1359 aa12.07□□□□□ -0.48
CTNNA1-229ENST00000521683 CEP350Q5VT06 3117 aa12.07□□□□□ -0.48
CTNNA1-229ENST00000521683 WWC3Q9ULE0 1092 aa12.07□□□□□ -0.48
CTNNA1-229ENST00000521683 PARP3Q9Y6F1 533 aa12.07□□□□□ -0.48
CTNNA1-229ENST00000521683 N4BP2Q86UW6 1770 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-229ENST00000521683 BRCA1P38398 1863 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-229ENST00000521683 RNMTO43148 476 aaKnown RBP12.06□□□□□ -0.48
CTNNA1-229ENST00000521683 DIAPH1O60610 1272 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-229ENST00000521683 INTS5Q6P9B9 1019 aaKnown RBP12.05□□□□□ -0.48
CTNNA1-229ENST00000521683 COL3A1P02461 1466 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-229ENST00000521683 KCPQ6ZWJ8 1503 aa12.05□□□□□ -0.48
CTNNA1-229ENST00000521683 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 HMOX1P09601 288 aa12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 DPEP1P16444 411 aa12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 LGR6Q9HBX8 967 aa12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 SRP68Q9UHB9 627 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 BCS1LQ9Y276 419 aa12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 SOS1Q07889 1333 aaPredicted RBP12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 ARFGEF1Q9Y6D6 1849 aa12.04□□□□□ -0.48
CTNNA1-229ENST00000521683 DDR1Q08345 913 aa12.03□□□□□ -0.48
CTNNA1-229ENST00000521683 FKBP8Q14318 412 aa12.03□□□□□ -0.48
CTNNA1-229ENST00000521683 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-229ENST00000521683 DNAJC10Q8IXB1 793 aa12.03□□□□□ -0.48
CTNNA1-229ENST00000521683 VSIG10Q8N0Z9 540 aa12.03□□□□□ -0.48
CTNNA1-229ENST00000521683 UBR2Q8IWV8 1755 aa12.02□□□□□ -0.48
CTNNA1-229ENST00000521683 FCHSD2O94868 740 aa12.02□□□□□ -0.49
CTNNA1-229ENST00000521683 CYP19A1P11511 503 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-229ENST00000521683 KCNA3P22001 575 aa12.02□□□□□ -0.49
CTNNA1-229ENST00000521683 CC2D1BQ5T0F9 858 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-229ENST00000521683 ZNF526Q8TF50 670 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-229ENST00000521683 COL15A1P39059 1388 aa12.02□□□□□ -0.49
CTNNA1-229ENST00000521683 POLRMTO00411 1230 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-229ENST00000521683 KIF3CO14782 793 aa12.01□□□□□ -0.49
CTNNA1-229ENST00000521683 ZPR1O75312 459 aa12.01□□□□□ -0.49
CTNNA1-229ENST00000521683 HSPA6P17066 643 aa12.01□□□□□ -0.49
CTNNA1-229ENST00000521683 TM4SF1P30408 202 aa12.01□□□□□ -0.49
CTNNA1-229ENST00000521683 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms