RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 C11orf95C9JLR9 678 aaPredicted RBP15.84■□□□□ 0.13
CSMD1-210ENST00000521646 EXOC5O00471 708 aa15.84■□□□□ 0.13
CSMD1-210ENST00000521646 RGPD2P0DJD1 1756 aa15.84■□□□□ 0.13
CSMD1-210ENST00000521646 TUBGCP6Q96RT7 1819 aa15.82■□□□□ 0.12
CSMD1-210ENST00000521646 ANKRD24Q8TF21 1146 aa15.82■□□□□ 0.12
CSMD1-210ENST00000521646 MS4A4AQ96JQ5 239 aa15.82■□□□□ 0.12
CSMD1-210ENST00000521646 TESK2Q96S53 571 aa15.82■□□□□ 0.12
CSMD1-210ENST00000521646 NLRP2Q9NX02 1062 aa15.82■□□□□ 0.12
CSMD1-210ENST00000521646 KCNQ4P56696 695 aa15.81■□□□□ 0.12
CSMD1-210ENST00000521646 EDC4Q6P2E9 1401 aaKnown RBP15.81■□□□□ 0.12
CSMD1-210ENST00000521646 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
CSMD1-210ENST00000521646 FHDC1Q9C0D6 1143 aaPredicted RBP15.81■□□□□ 0.12
CSMD1-210ENST00000521646 NSD2O96028 1365 aa15.8■□□□□ 0.12
CSMD1-210ENST00000521646 TMC1Q8TDI8 760 aa15.8■□□□□ 0.12
CSMD1-210ENST00000521646 IL2RBP14784 551 aa15.79■□□□□ 0.12
CSMD1-210ENST00000521646 SYT17Q9BSW7 474 aa15.79■□□□□ 0.12
CSMD1-210ENST00000521646 MFRPQ9BY79 579 aa15.79■□□□□ 0.12
CSMD1-210ENST00000521646 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
CSMD1-210ENST00000521646 COL24A1Q17RW2 1714 aa15.78■□□□□ 0.12
CSMD1-210ENST00000521646 DOT1LQ8TEK3 1739 aa15.78■□□□□ 0.12
CSMD1-210ENST00000521646 MEGF6O75095 1541 aa15.77■□□□□ 0.11
CSMD1-210ENST00000521646 MAP3K19Q56UN5 1328 aa15.76■□□□□ 0.11
CSMD1-210ENST00000521646 FBXO22Q8NEZ5 403 aa15.76■□□□□ 0.11
CSMD1-210ENST00000521646 MTFR1LQ9H019 292 aa15.76■□□□□ 0.11
CSMD1-210ENST00000521646 HS6ST3Q8IZP7 471 aa15.75■□□□□ 0.11
CSMD1-210ENST00000521646 IP6K1Q92551 441 aa15.75■□□□□ 0.11
CSMD1-210ENST00000521646 LTV1Q96GA3 475 aaPredicted RBP15.75■□□□□ 0.11
CSMD1-210ENST00000521646 KAT6BQ8WYB5 2073 aa15.75■□□□□ 0.11
CSMD1-210ENST00000521646 LY75O60449 1722 aa15.74■□□□□ 0.11
CSMD1-210ENST00000521646 QSER1Q2KHR3 1735 aa15.74■□□□□ 0.11
CSMD1-210ENST00000521646 ZNF784Q8NCA9 323 aaPredicted RBP15.74■□□□□ 0.11
CSMD1-210ENST00000521646 TMEM121BQ9BXQ6 578 aaPredicted RBP15.74■□□□□ 0.11
CSMD1-210ENST00000521646 PNPLA7Q6ZV29 1317 aa15.73■□□□□ 0.11
CSMD1-210ENST00000521646 ST20-MTHFSA0A0A6YYL1 179 aa15.73■□□□□ 0.11
CSMD1-210ENST00000521646 SNPHO15079 494 aa15.73■□□□□ 0.11
CSMD1-210ENST00000521646 HOXC9P31274 260 aa15.73■□□□□ 0.11
CSMD1-210ENST00000521646 HDGFL2Q7Z4V5 671 aaPredicted RBP15.73■□□□□ 0.11
CSMD1-210ENST00000521646 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
CSMD1-210ENST00000521646 DDX54Q8TDD1 881 aaKnown RBP15.72■□□□□ 0.11
CSMD1-210ENST00000521646 PRIM1P49642 420 aaKnown RBP15.7■□□□□ 0.1
CSMD1-210ENST00000521646 RRS1Q15050 365 aaKnown RBP15.7■□□□□ 0.1
CSMD1-210ENST00000521646 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
CSMD1-210ENST00000521646 ARXQ96QS3 562 aa15.7■□□□□ 0.1
CSMD1-210ENST00000521646 MAP3K5Q99683 1374 aa15.7■□□□□ 0.1
CSMD1-210ENST00000521646 NBPF6Q5VWK0 638 aa15.69■□□□□ 0.1
CSMD1-210ENST00000521646 NBPF4Q96M43 638 aa15.69■□□□□ 0.1
CSMD1-210ENST00000521646 PUS7Q96PZ0 661 aaKnown RBP15.69■□□□□ 0.1
CSMD1-210ENST00000521646 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
CSMD1-210ENST00000521646 ANKRD36BQ8N2N9 1353 aa15.69■□□□□ 0.1
CSMD1-210ENST00000521646 TOGARAM1Q9Y4F4 1720 aa15.68■□□□□ 0.1
CSMD1-210ENST00000521646 CHD4Q14839 1912 aa15.68■□□□□ 0.1
CSMD1-210ENST00000521646 TONSLQ96HA7 1378 aa15.68■□□□□ 0.1
CSMD1-210ENST00000521646 NLGN2Q8NFZ4 835 aa15.68■□□□□ 0.1
CSMD1-210ENST00000521646 CEP350Q5VT06 3117 aa15.68■□□□□ 0.1
CSMD1-210ENST00000521646 POTEMA6NI47 508 aa15.67■□□□□ 0.1
CSMD1-210ENST00000521646 AMIGO3Q86WK7 504 aa15.67■□□□□ 0.1
CSMD1-210ENST00000521646 FYB1O15117 783 aa15.66■□□□□ 0.1
CSMD1-210ENST00000521646 POTEGQ6S5H5 508 aa15.66■□□□□ 0.1
CSMD1-210ENST00000521646 GGNBP2Q9H3C7 697 aa15.66■□□□□ 0.1
CSMD1-210ENST00000521646 LCE2DQ5TA82 110 aaPredicted RBP15.65■□□□□ 0.1
CSMD1-210ENST00000521646 SYTL4Q96C24 671 aaPredicted RBP15.65■□□□□ 0.1
CSMD1-210ENST00000521646 SMIM5Q71RC9 77 aa15.64■□□□□ 0.09
CSMD1-210ENST00000521646 COG3Q96JB2 828 aa15.64■□□□□ 0.09
CSMD1-210ENST00000521646 ST18O60284 1047 aa15.63■□□□□ 0.09
CSMD1-210ENST00000521646 HSP90AB2PQ58FF8 381 aa15.63■□□□□ 0.09
CSMD1-210ENST00000521646 SLC27A3Q5K4L6 730 aa15.63■□□□□ 0.09
CSMD1-210ENST00000521646 COL23A1Q86Y22 540 aaPredicted RBP15.63■□□□□ 0.09
CSMD1-210ENST00000521646 ZCRB1Q8TBF4 217 aaKnown RBP15.63■□□□□ 0.09
CSMD1-210ENST00000521646 CARD14Q9BXL6 1004 aa15.63■□□□□ 0.09
CSMD1-210ENST00000521646 TAF1LQ8IZX4 1826 aa15.62■□□□□ 0.09
CSMD1-210ENST00000521646 KIF20BQ96Q89 1820 aa15.62■□□□□ 0.09
CSMD1-210ENST00000521646 YBX3P16989 372 aaKnown RBP eCLIP15.62■□□□□ 0.09
CSMD1-210ENST00000521646 AMPHP49418 695 aa15.62■□□□□ 0.09
CSMD1-210ENST00000521646 C5P01031 1676 aa15.62■□□□□ 0.09
CSMD1-210ENST00000521646 RTL1A6NKG5 1358 aa15.62■□□□□ 0.09
CSMD1-210ENST00000521646 CYP27B1O15528 508 aa15.6■□□□□ 0.09
CSMD1-210ENST00000521646 MSL1Q68DK7 614 aa15.6■□□□□ 0.09
CSMD1-210ENST00000521646 TFCP2L1Q9NZI6 479 aa15.6■□□□□ 0.09
CSMD1-210ENST00000521646 USP47Q96K76 1375 aa15.6■□□□□ 0.09
CSMD1-210ENST00000521646 ITGB4P16144 1822 aa15.59■□□□□ 0.09
CSMD1-210ENST00000521646 AMER1Q5JTC6 1135 aaPredicted RBP15.59■□□□□ 0.09
CSMD1-210ENST00000521646 CCNL1Q9UK58 526 aaPredicted RBP15.59■□□□□ 0.09
CSMD1-210ENST00000521646 PKD1L3Q7Z443 1732 aa15.59■□□□□ 0.09
CSMD1-210ENST00000521646 ANKRD26Q9UPS8 1709 aa15.58■□□□□ 0.08
CSMD1-210ENST00000521646 PPP1R37O75864 691 aa15.58■□□□□ 0.08
CSMD1-210ENST00000521646 SLC16A10Q8TF71 515 aa15.58■□□□□ 0.08
CSMD1-210ENST00000521646 EMILIN1Q9Y6C2 1016 aa15.58■□□□□ 0.08
CSMD1-210ENST00000521646 MAP2P11137 1827 aaKnown RBP15.58■□□□□ 0.08
CSMD1-210ENST00000521646 NCAPD2Q15021 1401 aa15.58■□□□□ 0.08
CSMD1-210ENST00000521646 TMEM92Q6UXU6 159 aa15.57■□□□□ 0.08
CSMD1-210ENST00000521646 INSRP06213 1382 aa15.57■□□□□ 0.08
CSMD1-210ENST00000521646 GPR162Q16538 588 aa15.56■□□□□ 0.08
CSMD1-210ENST00000521646 C4BP0C0L5 1744 aa15.56■□□□□ 0.08
CSMD1-210ENST00000521646 UBR3Q6ZT12 1888 aa15.55■□□□□ 0.08
CSMD1-210ENST00000521646 C1QTNF8P60827 252 aa15.55■□□□□ 0.08
CSMD1-210ENST00000521646 NSD3Q9BZ95 1437 aa15.54■□□□□ 0.08
CSMD1-210ENST00000521646 FLT4P35916 1363 aa15.54■□□□□ 0.08
CSMD1-210ENST00000521646 PALLDQ8WX93 1383 aa15.54■□□□□ 0.08
CSMD1-210ENST00000521646 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
CSMD1-210ENST00000521646 POLD1P28340 1107 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms