RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 MTHFSDQ2M296 383 aaKnown RBP29.06■■■□□ 2.24
HOXA3-204ENST00000521401 TAF1LQ8IZX4 1826 aa29.06■■■□□ 2.24
HOXA3-204ENST00000521401 C4BP0C0L5 1744 aa29.06■■■□□ 2.24
HOXA3-204ENST00000521401 PPP2R1AP30153 589 aa29.05■■■□□ 2.24
HOXA3-204ENST00000521401 NFATC2IPQ8NCF5 419 aa29.05■■■□□ 2.24
HOXA3-204ENST00000521401 AK7Q96M32 723 aa29.05■■■□□ 2.24
HOXA3-204ENST00000521401 MSH5O43196 834 aa29.04■■■□□ 2.24
HOXA3-204ENST00000521401 SMIM5Q71RC9 77 aa29.04■■■□□ 2.24
HOXA3-204ENST00000521401 FLAD1Q8NFF5 587 aa29.04■■■□□ 2.24
HOXA3-204ENST00000521401 COL24A1Q17RW2 1714 aa29.03■■■□□ 2.24
HOXA3-204ENST00000521401 U2SURPO15042 1029 aaKnown RBP29.03■■■□□ 2.24
HOXA3-204ENST00000521401 LGR6Q9HBX8 967 aa29.03■■■□□ 2.24
HOXA3-204ENST00000521401 POLD1P28340 1107 aa29.02■■■□□ 2.24
HOXA3-204ENST00000521401 MAP3K5Q99683 1374 aa29.01■■■□□ 2.24
HOXA3-204ENST00000521401 RNMTO43148 476 aaKnown RBP29■■■□□ 2.23
HOXA3-204ENST00000521401 RBM42Q9BTD8 480 aaKnown RBP29■■■□□ 2.23
HOXA3-204ENST00000521401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.99■■■□□ 2.23
HOXA3-204ENST00000521401 MSL1Q68DK7 614 aa28.99■■■□□ 2.23
HOXA3-204ENST00000521401 CFAP53Q96M91 514 aa28.99■■■□□ 2.23
HOXA3-204ENST00000521401 PHF14O94880 888 aa28.98■■■□□ 2.23
HOXA3-204ENST00000521401 SSFA2P28290 1259 aa28.98■■■□□ 2.23
HOXA3-204ENST00000521401 SLC52A2Q9HAB3 445 aa28.98■■■□□ 2.23
HOXA3-204ENST00000521401 GNPATO15228 680 aa28.96■■■□□ 2.23
HOXA3-204ENST00000521401 MRC1P22897 1456 aa28.94■■■□□ 2.22
HOXA3-204ENST00000521401 PTCD1O75127 700 aaKnown RBP28.94■■■□□ 2.22
HOXA3-204ENST00000521401 RSPH6AQ9H0K4 717 aa28.94■■■□□ 2.22
HOXA3-204ENST00000521401 UBR3Q6ZT12 1888 aa28.93■■■□□ 2.22
HOXA3-204ENST00000521401 SCN11AQ9UI33 1791 aa28.93■■■□□ 2.22
HOXA3-204ENST00000521401 ZNF831Q5JPB2 1677 aa28.93■■■□□ 2.22
HOXA3-204ENST00000521401 RC3H1Q5TC82 1133 aaKnown RBP28.93■■■□□ 2.22
HOXA3-204ENST00000521401 CNTNAP4Q9C0A0 1308 aa28.92■■■□□ 2.22
HOXA3-204ENST00000521401 ADAMTS7Q9UKP4 1686 aa28.91■■■□□ 2.22
HOXA3-204ENST00000521401 GAS2L2Q8NHY3 880 aa28.91■■■□□ 2.22
HOXA3-204ENST00000521401 PHACTR3Q96KR7 559 aa28.91■■■□□ 2.22
HOXA3-204ENST00000521401 NUDCQ9Y266 331 aa28.91■■■□□ 2.22
HOXA3-204ENST00000521401 DCAF8L1A6NGE4 600 aa28.9■■■□□ 2.22
HOXA3-204ENST00000521401 PRKAR2BP31323 418 aa28.9■■■□□ 2.22
HOXA3-204ENST00000521401 KLHL34Q8N239 644 aa28.89■■■□□ 2.22
HOXA3-204ENST00000521401 IL17REQ8NFR9 667 aa28.89■■■□□ 2.22
HOXA3-204ENST00000521401 SLC39A6Q13433 755 aa28.88■■■□□ 2.21
HOXA3-204ENST00000521401 RTCBQ9Y3I0 505 aaKnown RBP28.88■■■□□ 2.21
HOXA3-204ENST00000521401 U2AF1L5P0DN76 240 aaPredicted RBP28.87■■■□□ 2.21
HOXA3-204ENST00000521401 U2AF1Q01081 240 aaKnown RBP eCLIP28.87■■■□□ 2.21
HOXA3-204ENST00000521401 NLGN2Q8NFZ4 835 aa28.87■■■□□ 2.21
HOXA3-204ENST00000521401 GNAT3A8MTJ3 354 aa28.86■■■□□ 2.21
HOXA3-204ENST00000521401 RPS6KA4O75676 772 aa28.86■■■□□ 2.21
HOXA3-204ENST00000521401 TRAPPC3LQ5T215 181 aa28.85■■■□□ 2.21
HOXA3-204ENST00000521401 COL5A3P25940 1745 aaPredicted RBP28.85■■■□□ 2.21
HOXA3-204ENST00000521401 CRKLP46109 303 aaKnown RBP28.84■■■□□ 2.21
HOXA3-204ENST00000521401 ARHGEF1Q92888 912 aaKnown RBP28.84■■■□□ 2.21
HOXA3-204ENST00000521401 UTRNP46939 3433 aa28.84■■■□□ 2.21
HOXA3-204ENST00000521401 FCHSD2O94868 740 aa28.83■■■□□ 2.21
HOXA3-204ENST00000521401 ADRA2BP18089 450 aa28.83■■■□□ 2.21
HOXA3-204ENST00000521401 DNAJC10Q8IXB1 793 aa28.83■■■□□ 2.21
HOXA3-204ENST00000521401 KCPQ6ZWJ8 1503 aa28.82■■■□□ 2.2
HOXA3-204ENST00000521401 DDX10Q13206 875 aaKnown RBP28.81■■■□□ 2.2
HOXA3-204ENST00000521401 INTS5Q6P9B9 1019 aaKnown RBP28.81■■■□□ 2.2
HOXA3-204ENST00000521401 TJP1Q07157 1748 aa28.8■■■□□ 2.2
HOXA3-204ENST00000521401 CICQ96RK0 1608 aaPredicted RBP28.8■■■□□ 2.2
HOXA3-204ENST00000521401 CEMIPQ8WUJ3 1361 aa28.8■■■□□ 2.2
HOXA3-204ENST00000521401 YY1P25490 414 aa28.79■■■□□ 2.2
HOXA3-204ENST00000521401 CD2APQ9Y5K6 639 aa28.79■■■□□ 2.2
HOXA3-204ENST00000521401 MYH14Q7Z406 1995 aaKnown RBP28.79■■■□□ 2.2
HOXA3-204ENST00000521401 CYP19A1P11511 503 aaPredicted RBP28.77■■■□□ 2.2
HOXA3-204ENST00000521401 TEFQ10587 303 aa28.77■■■□□ 2.2
HOXA3-204ENST00000521401 GYS1P13807 737 aa28.76■■■□□ 2.19
HOXA3-204ENST00000521401 RFC4P35249 363 aa28.76■■■□□ 2.19
HOXA3-204ENST00000521401 VSIG10Q8N0Z9 540 aa28.76■■■□□ 2.19
HOXA3-204ENST00000521401 MMP10P09238 476 aa28.74■■■□□ 2.19
HOXA3-204ENST00000521401 RALBP1Q15311 655 aa28.74■■■□□ 2.19
HOXA3-204ENST00000521401 GPR162Q16538 588 aa28.74■■■□□ 2.19
HOXA3-204ENST00000521401 ZNF790Q6PG37 636 aa28.74■■■□□ 2.19
HOXA3-204ENST00000521401 NLGN1Q8N2Q7 840 aa28.74■■■□□ 2.19
HOXA3-204ENST00000521401 CCDC87Q9NVE4 849 aa28.74■■■□□ 2.19
HOXA3-204ENST00000521401 VIRMAQ69YN4 1812 aaKnown RBP28.73■■■□□ 2.19
HOXA3-204ENST00000521401 TTC5Q8N0Z6 440 aa28.72■■■□□ 2.19
HOXA3-204ENST00000521401 ZNF496Q96IT1 587 aaPredicted RBP28.72■■■□□ 2.19
HOXA3-204ENST00000521401 SRP68Q9UHB9 627 aaKnown RBP28.72■■■□□ 2.19
HOXA3-204ENST00000521401 SOS1Q07889 1333 aaPredicted RBP28.71■■■□□ 2.19
HOXA3-204ENST00000521401 PLEKHF1Q96S99 279 aa28.71■■■□□ 2.19
HOXA3-204ENST00000521401 YBX3P16989 372 aaKnown RBP eCLIP28.7■■■□□ 2.18
HOXA3-204ENST00000521401 ZBTB1Q9Y2K1 713 aa28.7■■■□□ 2.18
HOXA3-204ENST00000521401 USP42Q9H9J4 1324 aaKnown RBP28.69■■■□□ 2.18
HOXA3-204ENST00000521401 KCNQ3O43525 872 aa28.69■■■□□ 2.18
HOXA3-204ENST00000521401 MCM10Q7L590 875 aa28.69■■■□□ 2.18
HOXA3-204ENST00000521401 PELP1Q8IZL8 1130 aaKnown RBP28.69■■■□□ 2.18
HOXA3-204ENST00000521401 UBR2Q8IWV8 1755 aa28.69■■■□□ 2.18
HOXA3-204ENST00000521401 HEG1Q9ULI3 1381 aa28.68■■■□□ 2.18
HOXA3-204ENST00000521401 HTATSF1O43719 755 aaKnown RBP28.68■■■□□ 2.18
HOXA3-204ENST00000521401 DCTN1Q14203 1278 aa28.68■■■□□ 2.18
HOXA3-204ENST00000521401 GOLGB1Q14789 3259 aaKnown RBP28.68■■■□□ 2.18
HOXA3-204ENST00000521401 SIPA1L3O60292 1781 aaPredicted RBP28.67■■■□□ 2.18
HOXA3-204ENST00000521401 BTBD11A6QL63 1104 aa28.67■■■□□ 2.18
HOXA3-204ENST00000521401 FKBP8Q14318 412 aa28.67■■■□□ 2.18
HOXA3-204ENST00000521401 RTF1Q92541 710 aaKnown RBP28.67■■■□□ 2.18
HOXA3-204ENST00000521401 C4AP0C0L4 1744 aa28.66■■■□□ 2.18
HOXA3-204ENST00000521401 FMNL2Q96PY5 1086 aa28.64■■■□□ 2.18
HOXA3-204ENST00000521401 STARD3NLO95772 234 aa28.63■■■□□ 2.17
HOXA3-204ENST00000521401 USPL1Q5W0Q7 1092 aa28.62■■■□□ 2.17
HOXA3-204ENST00000521401 TEX13AQ9BXU3 409 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms