RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 N4BP2Q86UW6 1770 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-227ENST00000521387 FCHSD2O94868 740 aa10.86□□□□□ -0.67
CTNNA1-227ENST00000521387 VEGFAP15692 232 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-227ENST00000521387 DPEP1P16444 411 aa10.86□□□□□ -0.67
CTNNA1-227ENST00000521387 TGFB2P61812 414 aa10.86□□□□□ -0.67
CTNNA1-227ENST00000521387 FLAD1Q8NFF5 587 aa10.86□□□□□ -0.67
CTNNA1-227ENST00000521387 ANKRD36BQ8N2N9 1353 aa10.86□□□□□ -0.67
CTNNA1-227ENST00000521387 TOGARAM1Q9Y4F4 1720 aa10.85□□□□□ -0.67
CTNNA1-227ENST00000521387 DDX54Q8TDD1 881 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-227ENST00000521387 SYTL4Q96C24 671 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-227ENST00000521387 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
CTNNA1-227ENST00000521387 KIF13BQ9NQT8 1826 aa10.84□□□□□ -0.67
CTNNA1-227ENST00000521387 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
CTNNA1-227ENST00000521387 DCAF5Q96JK2 942 aa10.83□□□□□ -0.68
CTNNA1-227ENST00000521387 VIRMAQ69YN4 1812 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-227ENST00000521387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-227ENST00000521387 GLTPD2A6NH11 291 aa10.82□□□□□ -0.68
CTNNA1-227ENST00000521387 SOX12O15370 315 aa10.82□□□□□ -0.68
CTNNA1-227ENST00000521387 NLRP2Q9NX02 1062 aa10.82□□□□□ -0.68
CTNNA1-227ENST00000521387 BRCA1P38398 1863 aaKnown RBP10.82□□□□□ -0.68
CTNNA1-227ENST00000521387 SBF1O95248 1867 aa10.81□□□□□ -0.68
CTNNA1-227ENST00000521387 PHF14O94880 888 aa10.81□□□□□ -0.68
CTNNA1-227ENST00000521387 MMP10P09238 476 aa10.81□□□□□ -0.68
CTNNA1-227ENST00000521387 POTEJP0CG39 1038 aa10.81□□□□□ -0.68
CTNNA1-227ENST00000521387 CFAP44Q96MT7 982 aa10.81□□□□□ -0.68
CTNNA1-227ENST00000521387 C5P01031 1676 aa10.8□□□□□ -0.68
CTNNA1-227ENST00000521387 KDM6AO15550 1401 aaPredicted RBP10.79□□□□□ -0.68
CTNNA1-227ENST00000521387 MCOLN1Q9GZU1 580 aa10.79□□□□□ -0.68
CTNNA1-227ENST00000521387 PASKQ96RG2 1323 aa10.79□□□□□ -0.68
CTNNA1-227ENST00000521387 ARFGEF1Q9Y6D6 1849 aa10.79□□□□□ -0.68
CTNNA1-227ENST00000521387 NFAT5O94916 1531 aa10.79□□□□□ -0.68
CTNNA1-227ENST00000521387 USP47Q96K76 1375 aa10.78□□□□□ -0.68
CTNNA1-227ENST00000521387 DOT1LQ8TEK3 1739 aa10.78□□□□□ -0.68
CTNNA1-227ENST00000521387 KCNH5Q8NCM2 988 aa10.78□□□□□ -0.68
CTNNA1-227ENST00000521387 TAF1LQ8IZX4 1826 aa10.78□□□□□ -0.68
CTNNA1-227ENST00000521387 UBR3Q6ZT12 1888 aa10.78□□□□□ -0.68
CTNNA1-227ENST00000521387 RASSF7Q02833 373 aa10.77□□□□□ -0.69
CTNNA1-227ENST00000521387 C4BP0C0L5 1744 aa10.77□□□□□ -0.69
CTNNA1-227ENST00000521387 ZC3H4Q9UPT8 1303 aaKnown RBP10.77□□□□□ -0.69
CTNNA1-227ENST00000521387 PPARGC1BQ86YN6 1023 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-227ENST00000521387 AK7Q96M32 723 aa10.76□□□□□ -0.69
CTNNA1-227ENST00000521387 SSFA2P28290 1259 aa10.75□□□□□ -0.69
CTNNA1-227ENST00000521387 CABP1Q9NZU7 370 aa10.75□□□□□ -0.69
CTNNA1-227ENST00000521387 PIM2Q9P1W9 311 aa10.75□□□□□ -0.69
CTNNA1-227ENST00000521387 NSD3Q9BZ95 1437 aa10.75□□□□□ -0.69
CTNNA1-227ENST00000521387 MAP2K1Q02750 393 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-227ENST00000521387 DALRD3Q5D0E6 543 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-227ENST00000521387 ANKRD24Q8TF21 1146 aa10.74□□□□□ -0.69
CTNNA1-227ENST00000521387 RASSF10A6NK89 507 aa10.73□□□□□ -0.69
CTNNA1-227ENST00000521387 TMEM88BA6NKF7 163 aa10.73□□□□□ -0.69
CTNNA1-227ENST00000521387 ITGBL1O95965 494 aaPredicted RBP10.73□□□□□ -0.69
CTNNA1-227ENST00000521387 CABP2Q9NPB3 220 aa10.73□□□□□ -0.69
CTNNA1-227ENST00000521387 TSKSQ9UJT2 592 aa10.73□□□□□ -0.69
CTNNA1-227ENST00000521387 TTC21BQ7Z4L5 1316 aa10.73□□□□□ -0.69
CTNNA1-227ENST00000521387 WDR33Q9C0J8 1336 aaKnown RBP10.73□□□□□ -0.69
CTNNA1-227ENST00000521387 PALLDQ8WX93 1383 aa10.73□□□□□ -0.69
CTNNA1-227ENST00000521387 SOX10P56693 466 aa10.72□□□□□ -0.69
CTNNA1-227ENST00000521387 LINC00116Q8NCU8 138 aa10.72□□□□□ -0.69
CTNNA1-227ENST00000521387 A0A0C4DFX4 3053 aa10.71□□□□□ -0.69
CTNNA1-227ENST00000521387 LMNB1P20700 586 aa10.71□□□□□ -0.69
CTNNA1-227ENST00000521387 DLL1O00548 723 aa10.7□□□□□ -0.7
CTNNA1-227ENST00000521387 CHRNA5P30532 468 aa10.7□□□□□ -0.7
CTNNA1-227ENST00000521387 DEFB115Q30KQ5 88 aa10.7□□□□□ -0.7
CTNNA1-227ENST00000521387 HABP4Q5JVS0 413 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-227ENST00000521387 ZCRB1Q8TBF4 217 aaKnown RBP10.7□□□□□ -0.7
CTNNA1-227ENST00000521387 CCDC87Q9NVE4 849 aa10.7□□□□□ -0.7
CTNNA1-227ENST00000521387 CUL9Q8IWT3 2517 aa10.69□□□□□ -0.7
CTNNA1-227ENST00000521387 SRPK2P78362 688 aaKnown RBP10.69□□□□□ -0.7
CTNNA1-227ENST00000521387 MPHOSPH9Q99550 1183 aa10.69□□□□□ -0.7
CTNNA1-227ENST00000521387 CASP8AP2Q9UKL3 1982 aa10.68□□□□□ -0.7
CTNNA1-227ENST00000521387 TMF1P82094 1093 aa10.68□□□□□ -0.7
CTNNA1-227ENST00000521387 ITPK1Q13572 414 aa10.68□□□□□ -0.7
CTNNA1-227ENST00000521387 DGKZQ13574 1117 aa10.68□□□□□ -0.7
CTNNA1-227ENST00000521387 METRNQ9UJH8 293 aa10.68□□□□□ -0.7
CTNNA1-227ENST00000521387 C4AP0C0L4 1744 aa10.67□□□□□ -0.7
CTNNA1-227ENST00000521387 GNPATO15228 680 aa10.67□□□□□ -0.7
CTNNA1-227ENST00000521387 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
CTNNA1-227ENST00000521387 NLGN1Q8N2Q7 840 aa10.67□□□□□ -0.7
CTNNA1-227ENST00000521387 MEGF6O75095 1541 aa10.67□□□□□ -0.7
CTNNA1-227ENST00000521387 MAP2P11137 1827 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-227ENST00000521387 NFKBIEO00221 500 aa10.66□□□□□ -0.7
CTNNA1-227ENST00000521387 GYS1P13807 737 aa10.66□□□□□ -0.7
CTNNA1-227ENST00000521387 HMGB2P26583 209 aaKnown RBP10.66□□□□□ -0.7
CTNNA1-227ENST00000521387 MPRIPQ6WCQ1 1025 aa10.66□□□□□ -0.7
CTNNA1-227ENST00000521387 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
CTNNA1-227ENST00000521387 LTBP1Q14766 1721 aa10.66□□□□□ -0.7
CTNNA1-227ENST00000521387 THSD7BQ9C0I4 1608 aa10.66□□□□□ -0.7
CTNNA1-227ENST00000521387 FXR1P51114 621 aaKnown RBP eCLIP10.65□□□□□ -0.7
CTNNA1-227ENST00000521387 SZT2Q5T011 3432 aa10.65□□□□□ -0.71
CTNNA1-227ENST00000521387 TIAM2Q8IVF5 1701 aa10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 LOC102724428A0A0B4J2F2 783 aa10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 DDNO94850 711 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 SIK1P57059 783 aa10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 DPY19L2Q6NUT2 758 aa10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 LDHDQ86WU2 507 aa10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 FAM163AQ96GL9 167 aaPredicted RBP10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 MS4A3Q96HJ5 214 aa10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 PARP3Q9Y6F1 533 aa10.64□□□□□ -0.71
CTNNA1-227ENST00000521387 FAM208AQ9UK61 1670 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-227ENST00000521387 TTC21AQ8NDW8 1320 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms