RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
TRAM1-204ENST00000521049 PLEKHG2Q9H7P9 1386 aa22.71■■□□□ 1.23
TRAM1-204ENST00000521049 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
TRAM1-204ENST00000521049 ERVV-2B6SEH9 535 aa22.7■■□□□ 1.22
TRAM1-204ENST00000521049 KIF3CO14782 793 aa22.7■■□□□ 1.22
TRAM1-204ENST00000521049 RTCBQ9Y3I0 505 aaKnown RBP22.7■■□□□ 1.22
TRAM1-204ENST00000521049 MAP2P11137 1827 aaKnown RBP22.7■■□□□ 1.22
TRAM1-204ENST00000521049 EIF4A2Q14240 407 aaKnown RBP22.69■■□□□ 1.22
TRAM1-204ENST00000521049 RC3H1Q5TC82 1133 aaKnown RBP22.69■■□□□ 1.22
TRAM1-204ENST00000521049 TIMELESSQ9UNS1 1208 aa22.68■■□□□ 1.22
TRAM1-204ENST00000521049 HSP90AB1P08238 724 aaKnown RBP22.67■■□□□ 1.22
TRAM1-204ENST00000521049 ADRA2BP18089 450 aa22.67■■□□□ 1.22
TRAM1-204ENST00000521049 ARHGEF1Q92888 912 aaKnown RBP22.66■■□□□ 1.22
TRAM1-204ENST00000521049 DCAF5Q96JK2 942 aa22.66■■□□□ 1.22
TRAM1-204ENST00000521049 SLC4A9Q96Q91 983 aa22.66■■□□□ 1.22
TRAM1-204ENST00000521049 RBM42Q9BTD8 480 aaKnown RBP22.65■■□□□ 1.22
TRAM1-204ENST00000521049 A0A0G2JLW4 131 aa22.64■■□□□ 1.21
TRAM1-204ENST00000521049 RPS6KA4O75676 772 aa22.64■■□□□ 1.21
TRAM1-204ENST00000521049 PLEKHO1Q53GL0 409 aaPredicted RBP22.64■■□□□ 1.21
TRAM1-204ENST00000521049 BCS1LQ9Y276 419 aa22.64■■□□□ 1.21
TRAM1-204ENST00000521049 KDRP35968 1356 aa22.63■■□□□ 1.21
TRAM1-204ENST00000521049 PXDNLA1KZ92 1463 aa22.63■■□□□ 1.21
TRAM1-204ENST00000521049 CCDC87Q9NVE4 849 aa22.63■■□□□ 1.21
TRAM1-204ENST00000521049 ANKRD26Q9UPS8 1709 aa22.62■■□□□ 1.21
TRAM1-204ENST00000521049 CNTNAP4Q9C0A0 1308 aa22.62■■□□□ 1.21
TRAM1-204ENST00000521049 GYS1P13807 737 aa22.62■■□□□ 1.21
TRAM1-204ENST00000521049 RFC4P35249 363 aa22.62■■□□□ 1.21
TRAM1-204ENST00000521049 TNNT2P45379 298 aaPredicted RBP22.62■■□□□ 1.21
TRAM1-204ENST00000521049 TOMM70O94826 608 aa22.61■■□□□ 1.21
TRAM1-204ENST00000521049 AMOTQ4VCS5 1084 aa22.61■■□□□ 1.21
TRAM1-204ENST00000521049 ARHGAP27Q6ZUM4 889 aa22.61■■□□□ 1.21
TRAM1-204ENST00000521049 PARP3Q9Y6F1 533 aa22.61■■□□□ 1.21
TRAM1-204ENST00000521049 DPEP1P16444 411 aa22.6■■□□□ 1.21
TRAM1-204ENST00000521049 APLP1P51693 650 aa22.6■■□□□ 1.21
TRAM1-204ENST00000521049 CABP4P57796 275 aa22.6■■□□□ 1.21
TRAM1-204ENST00000521049 CICQ96RK0 1608 aaPredicted RBP22.6■■□□□ 1.21
TRAM1-204ENST00000521049 C10orf71Q711Q0 1435 aa22.59■■□□□ 1.21
TRAM1-204ENST00000521049 FCHSD2O94868 740 aa22.58■■□□□ 1.21
TRAM1-204ENST00000521049 TRIM26Q12899 539 aaPredicted RBP22.57■■□□□ 1.2
TRAM1-204ENST00000521049 ZNF530Q6P9A1 599 aaPredicted RBP22.57■■□□□ 1.2
TRAM1-204ENST00000521049 KCNA3P22001 575 aa22.56■■□□□ 1.2
TRAM1-204ENST00000521049 MTHFSP49914 203 aa22.56■■□□□ 1.2
TRAM1-204ENST00000521049 POLR3GLQ9BT43 218 aa22.56■■□□□ 1.2
TRAM1-204ENST00000521049 DNAJC5GQ8N7S2 189 aa22.54■■□□□ 1.2
TRAM1-204ENST00000521049 PIM2Q9P1W9 311 aa22.54■■□□□ 1.2
TRAM1-204ENST00000521049 ZNF831Q5JPB2 1677 aa22.54■■□□□ 1.2
TRAM1-204ENST00000521049 KIF13BQ9NQT8 1826 aa22.53■■□□□ 1.2
TRAM1-204ENST00000521049 PTCD1O75127 700 aaKnown RBP22.53■■□□□ 1.2
TRAM1-204ENST00000521049 C1orf141Q5JVX7 400 aa22.53■■□□□ 1.2
TRAM1-204ENST00000521049 NFATC2IPQ8NCF5 419 aa22.53■■□□□ 1.2
TRAM1-204ENST00000521049 PANK3Q9H999 370 aa22.53■■□□□ 1.2
TRAM1-204ENST00000521049 KDM6AO15550 1401 aaPredicted RBP22.53■■□□□ 1.2
TRAM1-204ENST00000521049 CRKLP46109 303 aaKnown RBP22.52■■□□□ 1.2
TRAM1-204ENST00000521049 NMRK2Q9NPI5 230 aa22.52■■□□□ 1.2
TRAM1-204ENST00000521049 C9orf131Q5VYM1 1079 aa22.51■■□□□ 1.19
TRAM1-204ENST00000521049 DALRD3Q5D0E6 543 aaKnown RBP22.5■■□□□ 1.19
TRAM1-204ENST00000521049 RBM46Q8TBY0 533 aaKnown RBP22.5■■□□□ 1.19
TRAM1-204ENST00000521049 KIAA1551Q9HCM1 1747 aa22.5■■□□□ 1.19
TRAM1-204ENST00000521049 FKBP8Q14318 412 aa22.49■■□□□ 1.19
TRAM1-204ENST00000521049 AEBP1Q8IUX7 1158 aa22.49■■□□□ 1.19
TRAM1-204ENST00000521049 SRP68Q9UHB9 627 aaKnown RBP22.49■■□□□ 1.19
TRAM1-204ENST00000521049 USP42Q9H9J4 1324 aaKnown RBP22.49■■□□□ 1.19
TRAM1-204ENST00000521049 C4AP0C0L4 1744 aa22.48■■□□□ 1.19
TRAM1-204ENST00000521049 MORC1Q86VD1 984 aa22.48■■□□□ 1.19
TRAM1-204ENST00000521049 N4BP2Q86UW6 1770 aaPredicted RBP22.48■■□□□ 1.19
TRAM1-204ENST00000521049 TM4SF1P30408 202 aa22.47■■□□□ 1.19
TRAM1-204ENST00000521049 DDR1Q08345 913 aa22.47■■□□□ 1.19
TRAM1-204ENST00000521049 SULT6B1Q6IMI4 303 aa22.47■■□□□ 1.19
TRAM1-204ENST00000521049 INTS5Q6P9B9 1019 aaKnown RBP22.47■■□□□ 1.19
TRAM1-204ENST00000521049 CLSPNQ9HAW4 1339 aa22.47■■□□□ 1.19
TRAM1-204ENST00000521049 EIF4G2P78344 907 aaKnown RBP eCLIP22.46■■□□□ 1.19
TRAM1-204ENST00000521049 C16orf71Q8IYS4 520 aaPredicted RBP22.46■■□□□ 1.19
TRAM1-204ENST00000521049 COL5A3P25940 1745 aaPredicted RBP22.45■■□□□ 1.18
TRAM1-204ENST00000521049 POLRMTO00411 1230 aaKnown RBP22.44■■□□□ 1.18
TRAM1-204ENST00000521049 IL13P35225 146 aa22.44■■□□□ 1.18
TRAM1-204ENST00000521049 FSTL1Q12841 308 aa22.44■■□□□ 1.18
TRAM1-204ENST00000521049 KDM2BQ8NHM5 1336 aa22.44■■□□□ 1.18
TRAM1-204ENST00000521049 ZPR1O75312 459 aa22.43■■□□□ 1.18
TRAM1-204ENST00000521049 AKAP4Q5JQC9 854 aa22.43■■□□□ 1.18
TRAM1-204ENST00000521049 MYH14Q7Z406 1995 aaKnown RBP22.42■■□□□ 1.18
TRAM1-204ENST00000521049 HSPA5P11021 654 aaKnown RBP22.42■■□□□ 1.18
TRAM1-204ENST00000521049 CHRNA5P30532 468 aa22.42■■□□□ 1.18
TRAM1-204ENST00000521049 RNF181Q9P0P0 153 aa22.42■■□□□ 1.18
TRAM1-204ENST00000521049 DNAJC10Q8IXB1 793 aa22.41■■□□□ 1.18
TRAM1-204ENST00000521049 SLC52A2Q9HAB3 445 aa22.41■■□□□ 1.18
TRAM1-204ENST00000521049 USPL1Q5W0Q7 1092 aa22.4■■□□□ 1.18
TRAM1-204ENST00000521049 RRAGCQ9HB90 399 aa22.4■■□□□ 1.18
TRAM1-204ENST00000521049 LGR6Q9HBX8 967 aa22.39■■□□□ 1.17
TRAM1-204ENST00000521049 KNSTRNQ9Y448 316 aa22.39■■□□□ 1.17
TRAM1-204ENST00000521049 SOS1Q07889 1333 aaPredicted RBP22.38■■□□□ 1.17
TRAM1-204ENST00000521049 CYP19A1P11511 503 aaPredicted RBP22.38■■□□□ 1.17
TRAM1-204ENST00000521049 KLRG1Q96E93 195 aa22.38■■□□□ 1.17
TRAM1-204ENST00000521049 NARFQ9UHQ1 456 aa22.38■■□□□ 1.17
TRAM1-204ENST00000521049 BRCA1P38398 1863 aaKnown RBP22.37■■□□□ 1.17
TRAM1-204ENST00000521049 JMYQ8N9B5 988 aa22.37■■□□□ 1.17
TRAM1-204ENST00000521049 RNMTO43148 476 aaKnown RBP22.36■■□□□ 1.17
TRAM1-204ENST00000521049 KCPQ6ZWJ8 1503 aa22.36■■□□□ 1.17
TRAM1-204ENST00000521049 ZC3H4Q9UPT8 1303 aaKnown RBP22.35■■□□□ 1.17
TRAM1-204ENST00000521049 NFIXQ14938 502 aa22.35■■□□□ 1.17
TRAM1-204ENST00000521049 ARFGEF1Q9Y6D6 1849 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms