RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 TUBGCP6Q96RT7 1819 aa27.78■■■□□ 2.04
SNHG6-203ENST00000520944 KDRP35968 1356 aa27.77■■■□□ 2.04
SNHG6-203ENST00000520944 RBM42Q9BTD8 480 aaKnown RBP27.77■■■□□ 2.04
SNHG6-203ENST00000520944 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.76■■■□□ 2.03
SNHG6-203ENST00000520944 DIAPH1O60610 1272 aaKnown RBP27.76■■■□□ 2.03
SNHG6-203ENST00000520944 SSFA2P28290 1259 aa27.76■■■□□ 2.03
SNHG6-203ENST00000520944 ITPK1Q13572 414 aa27.76■■■□□ 2.03
SNHG6-203ENST00000520944 GPR162Q16538 588 aa27.76■■■□□ 2.03
SNHG6-203ENST00000520944 GOLGB1Q14789 3259 aaKnown RBP27.74■■■□□ 2.03
SNHG6-203ENST00000520944 C4BP0C0L5 1744 aa27.74■■■□□ 2.03
SNHG6-203ENST00000520944 NPC1L1Q9UHC9 1359 aa27.73■■■□□ 2.03
SNHG6-203ENST00000520944 GNPATO15228 680 aa27.73■■■□□ 2.03
SNHG6-203ENST00000520944 HMOX1P09601 288 aa27.73■■■□□ 2.03
SNHG6-203ENST00000520944 AMIGO3Q86WK7 504 aa27.73■■■□□ 2.03
SNHG6-203ENST00000520944 SMIM5Q71RC9 77 aa27.72■■■□□ 2.03
SNHG6-203ENST00000520944 NFATC2IPQ8NCF5 419 aa27.72■■■□□ 2.03
SNHG6-203ENST00000520944 KDM6AO15550 1401 aaPredicted RBP27.72■■■□□ 2.03
SNHG6-203ENST00000520944 TAF1LQ8IZX4 1826 aa27.71■■■□□ 2.03
SNHG6-203ENST00000520944 AKAP4Q5JQC9 854 aa27.71■■■□□ 2.03
SNHG6-203ENST00000520944 PELP1Q8IZL8 1130 aaKnown RBP27.71■■■□□ 2.03
SNHG6-203ENST00000520944 NLGN2Q8NFZ4 835 aa27.7■■■□□ 2.02
SNHG6-203ENST00000520944 COL24A1Q17RW2 1714 aa27.7■■■□□ 2.02
SNHG6-203ENST00000520944 RTCBQ9Y3I0 505 aaKnown RBP27.68■■■□□ 2.02
SNHG6-203ENST00000520944 PTCD1O75127 700 aaKnown RBP27.67■■■□□ 2.02
SNHG6-203ENST00000520944 SLC4A9Q96Q91 983 aa27.67■■■□□ 2.02
SNHG6-203ENST00000520944 TRAPPC3LQ5T215 181 aa27.66■■■□□ 2.02
SNHG6-203ENST00000520944 CD2APQ9Y5K6 639 aa27.66■■■□□ 2.02
SNHG6-203ENST00000520944 RC3H1Q5TC82 1133 aaKnown RBP27.65■■■□□ 2.02
SNHG6-203ENST00000520944 U2SURPO15042 1029 aaKnown RBP27.64■■■□□ 2.02
SNHG6-203ENST00000520944 LGR6Q9HBX8 967 aa27.63■■■□□ 2.01
SNHG6-203ENST00000520944 MTHFSDQ2M296 383 aaKnown RBP27.62■■■□□ 2.01
SNHG6-203ENST00000520944 SLC52A2Q9HAB3 445 aa27.62■■■□□ 2.01
SNHG6-203ENST00000520944 CFAP53Q96M91 514 aa27.61■■■□□ 2.01
SNHG6-203ENST00000520944 UBR3Q6ZT12 1888 aa27.61■■■□□ 2.01
SNHG6-203ENST00000520944 CNTNAP4Q9C0A0 1308 aa27.61■■■□□ 2.01
SNHG6-203ENST00000520944 RNMTO43148 476 aaKnown RBP27.6■■■□□ 2.01
SNHG6-203ENST00000520944 RPS6KA4O75676 772 aa27.6■■■□□ 2.01
SNHG6-203ENST00000520944 ADRA2BP18089 450 aa27.6■■■□□ 2.01
SNHG6-203ENST00000520944 GRIN3BO60391 1043 aa27.59■■■□□ 2.01
SNHG6-203ENST00000520944 RFC4P35249 363 aa27.59■■■□□ 2.01
SNHG6-203ENST00000520944 ARHGEF1Q92888 912 aaKnown RBP27.59■■■□□ 2.01
SNHG6-203ENST00000520944 NLGN1Q8N2Q7 840 aa27.57■■■□□ 2
SNHG6-203ENST00000520944 MMP10P09238 476 aa27.55■■■□□ 2
SNHG6-203ENST00000520944 CRKLP46109 303 aaKnown RBP27.55■■■□□ 2
SNHG6-203ENST00000520944 ZNF784Q8NCA9 323 aaPredicted RBP27.55■■■□□ 2
SNHG6-203ENST00000520944 YBX3P16989 372 aaKnown RBP eCLIP27.54■■■□□ 2
SNHG6-203ENST00000520944 ZNF831Q5JPB2 1677 aa27.54■■■□□ 2
SNHG6-203ENST00000520944 GAS2L2Q8NHY3 880 aa27.54■■■□□ 2
SNHG6-203ENST00000520944 NUDCQ9Y266 331 aa27.54■■■□□ 2
SNHG6-203ENST00000520944 COL3A1P02461 1466 aaPredicted RBP27.52■■■□□ 2
SNHG6-203ENST00000520944 SLC39A6Q13433 755 aa27.52■■■□□ 2
SNHG6-203ENST00000520944 GNAT3A8MTJ3 354 aa27.5■■□□□ 1.99
SNHG6-203ENST00000520944 GYS1P13807 737 aa27.5■■□□□ 1.99
SNHG6-203ENST00000520944 PPP2R1AP30153 589 aa27.5■■□□□ 1.99
SNHG6-203ENST00000520944 SCN11AQ9UI33 1791 aa27.5■■□□□ 1.99
SNHG6-203ENST00000520944 DNAJC10Q8IXB1 793 aa27.49■■□□□ 1.99
SNHG6-203ENST00000520944 TEFQ10587 303 aa27.48■■□□□ 1.99
SNHG6-203ENST00000520944 INTS5Q6P9B9 1019 aaKnown RBP27.47■■□□□ 1.99
SNHG6-203ENST00000520944 TTC5Q8N0Z6 440 aa27.47■■□□□ 1.99
SNHG6-203ENST00000520944 CCDC87Q9NVE4 849 aa27.47■■□□□ 1.99
SNHG6-203ENST00000520944 PARP3Q9Y6F1 533 aa27.47■■□□□ 1.99
SNHG6-203ENST00000520944 CHD4Q14839 1912 aa27.46■■□□□ 1.99
SNHG6-203ENST00000520944 PRKAR2BP31323 418 aa27.46■■□□□ 1.99
SNHG6-203ENST00000520944 MRC1P22897 1456 aa27.45■■□□□ 1.99
SNHG6-203ENST00000520944 COL5A3P25940 1745 aaPredicted RBP27.45■■□□□ 1.99
SNHG6-203ENST00000520944 U2AF1L5P0DN76 240 aaPredicted RBP27.45■■□□□ 1.98
SNHG6-203ENST00000520944 U2AF1Q01081 240 aaKnown RBP eCLIP27.45■■□□□ 1.98
SNHG6-203ENST00000520944 VSIG10Q8N0Z9 540 aa27.45■■□□□ 1.98
SNHG6-203ENST00000520944 IL17REQ8NFR9 667 aa27.44■■□□□ 1.98
SNHG6-203ENST00000520944 RSPH6AQ9H0K4 717 aa27.44■■□□□ 1.98
SNHG6-203ENST00000520944 CYP19A1P11511 503 aaPredicted RBP27.43■■□□□ 1.98
SNHG6-203ENST00000520944 PHACTR3Q96KR7 559 aa27.43■■□□□ 1.98
SNHG6-203ENST00000520944 SRP68Q9UHB9 627 aaKnown RBP27.43■■□□□ 1.98
SNHG6-203ENST00000520944 WWC3Q9ULE0 1092 aa27.43■■□□□ 1.98
SNHG6-203ENST00000520944 ZPR1O75312 459 aa27.42■■□□□ 1.98
SNHG6-203ENST00000520944 TGFB2P61812 414 aa27.42■■□□□ 1.98
SNHG6-203ENST00000520944 USP42Q9H9J4 1324 aaKnown RBP27.41■■□□□ 1.98
SNHG6-203ENST00000520944 MYH14Q7Z406 1995 aaKnown RBP27.4■■□□□ 1.98
SNHG6-203ENST00000520944 FCHSD2O94868 740 aa27.4■■□□□ 1.98
SNHG6-203ENST00000520944 STARD3NLO95772 234 aa27.39■■□□□ 1.98
SNHG6-203ENST00000520944 FKBP8Q14318 412 aa27.39■■□□□ 1.98
SNHG6-203ENST00000520944 ZNF790Q6PG37 636 aa27.38■■□□□ 1.97
SNHG6-203ENST00000520944 SOS1Q07889 1333 aaPredicted RBP27.38■■□□□ 1.97
SNHG6-203ENST00000520944 TJP1Q07157 1748 aa27.37■■□□□ 1.97
SNHG6-203ENST00000520944 RTF1Q92541 710 aaKnown RBP27.37■■□□□ 1.97
SNHG6-203ENST00000520944 CICQ96RK0 1608 aaPredicted RBP27.37■■□□□ 1.97
SNHG6-203ENST00000520944 ADAMTS7Q9UKP4 1686 aa27.36■■□□□ 1.97
SNHG6-203ENST00000520944 KCPQ6ZWJ8 1503 aa27.36■■□□□ 1.97
SNHG6-203ENST00000520944 A0A0G2JLW4 131 aa27.36■■□□□ 1.97
SNHG6-203ENST00000520944 USPL1Q5W0Q7 1092 aa27.36■■□□□ 1.97
SNHG6-203ENST00000520944 TEX13AQ9BXU3 409 aaPredicted RBP27.36■■□□□ 1.97
SNHG6-203ENST00000520944 ZBTB1Q9Y2K1 713 aa27.36■■□□□ 1.97
SNHG6-203ENST00000520944 CANXP27824 592 aaKnown RBP27.35■■□□□ 1.97
SNHG6-203ENST00000520944 ZNF496Q96IT1 587 aaPredicted RBP27.35■■□□□ 1.97
SNHG6-203ENST00000520944 BTBD11A6QL63 1104 aa27.34■■□□□ 1.97
SNHG6-203ENST00000520944 NARFQ9UHQ1 456 aa27.34■■□□□ 1.97
SNHG6-203ENST00000520944 C10orf71Q711Q0 1435 aa27.33■■□□□ 1.97
SNHG6-203ENST00000520944 FMNL2Q96PY5 1086 aa27.33■■□□□ 1.97
SNHG6-203ENST00000520944 CEMIPQ8WUJ3 1361 aa27.33■■□□□ 1.97
SNHG6-203ENST00000520944 PXDNLA1KZ92 1463 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms