RNA–Protein interactions for RNA: ENST00000520770.1

LRP12-205, Transcript of LDL receptor related protein 12, humanhuman

TSL 1 (best)

Gene LRP12, Length 853 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP12-205ENST00000520770 TMOD3Q9NYL9 352 aa13.9□□□□□ -0.18
LRP12-205ENST00000520770 TFCP2L1Q9NZI6 479 aa13.9□□□□□ -0.18
LRP12-205ENST00000520770 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
LRP12-205ENST00000520770 C5P01031 1676 aa13.89□□□□□ -0.19
LRP12-205ENST00000520770 ATG3Q9NT62 314 aa13.89□□□□□ -0.19
LRP12-205ENST00000520770 TAF1LQ8IZX4 1826 aa13.88□□□□□ -0.19
LRP12-205ENST00000520770 U2SURPO15042 1029 aaKnown RBP13.88□□□□□ -0.19
LRP12-205ENST00000520770 ITPK1Q13572 414 aa13.88□□□□□ -0.19
LRP12-205ENST00000520770 LINC00116Q8NCU8 138 aa13.88□□□□□ -0.19
LRP12-205ENST00000520770 SGIP1Q9BQI5 828 aa13.88□□□□□ -0.19
LRP12-205ENST00000520770 PPP2R1AP30153 589 aa13.87□□□□□ -0.19
LRP12-205ENST00000520770 AMOTQ4VCS5 1084 aa13.87□□□□□ -0.19
LRP12-205ENST00000520770 COL23A1Q86Y22 540 aaPredicted RBP13.87□□□□□ -0.19
LRP12-205ENST00000520770 SLC4A9Q96Q91 983 aa13.87□□□□□ -0.19
LRP12-205ENST00000520770 MTFR1LQ9H019 292 aa13.87□□□□□ -0.19
LRP12-205ENST00000520770 GOLGB1Q14789 3259 aaKnown RBP13.87□□□□□ -0.19
LRP12-205ENST00000520770 LOC102724428A0A0B4J2F2 783 aa13.86□□□□□ -0.19
LRP12-205ENST00000520770 SIK1P57059 783 aa13.86□□□□□ -0.19
LRP12-205ENST00000520770 MTHFSDQ2M296 383 aaKnown RBP13.86□□□□□ -0.19
LRP12-205ENST00000520770 C1orf141Q5JVX7 400 aa13.86□□□□□ -0.19
LRP12-205ENST00000520770 MSL1Q68DK7 614 aa13.86□□□□□ -0.19
LRP12-205ENST00000520770 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
LRP12-205ENST00000520770 DCAF5Q96JK2 942 aa13.86□□□□□ -0.19
LRP12-205ENST00000520770 LGR6Q9HBX8 967 aa13.86□□□□□ -0.19
LRP12-205ENST00000520770 QSER1Q2KHR3 1735 aa13.86□□□□□ -0.19
LRP12-205ENST00000520770 C4BP0C0L5 1744 aa13.85□□□□□ -0.19
LRP12-205ENST00000520770 CABP4P57796 275 aa13.85□□□□□ -0.19
LRP12-205ENST00000520770 ERVV-2B6SEH9 535 aa13.84□□□□□ -0.19
LRP12-205ENST00000520770 PHF14O94880 888 aa13.84□□□□□ -0.19
LRP12-205ENST00000520770 POLA2Q14181 598 aa13.84□□□□□ -0.19
LRP12-205ENST00000520770 NFATC2IPQ8NCF5 419 aa13.84□□□□□ -0.19
LRP12-205ENST00000520770 RBM42Q9BTD8 480 aaKnown RBP13.84□□□□□ -0.19
LRP12-205ENST00000520770 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.19
LRP12-205ENST00000520770 HSP90AB1P08238 724 aaKnown RBP13.83□□□□□ -0.2
LRP12-205ENST00000520770 ATP6V1AP38606 617 aa13.83□□□□□ -0.2
LRP12-205ENST00000520770 AKAP4Q5JQC9 854 aa13.83□□□□□ -0.2
LRP12-205ENST00000520770 FHDC1Q9C0D6 1143 aaPredicted RBP13.83□□□□□ -0.2
LRP12-205ENST00000520770 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.2
LRP12-205ENST00000520770 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
LRP12-205ENST00000520770 DSG3P32926 999 aa13.82□□□□□ -0.2
LRP12-205ENST00000520770 DDX10Q13206 875 aaKnown RBP13.82□□□□□ -0.2
LRP12-205ENST00000520770 PHACTR3Q96KR7 559 aa13.82□□□□□ -0.2
LRP12-205ENST00000520770 AK7Q96M32 723 aa13.82□□□□□ -0.2
LRP12-205ENST00000520770 ARXQ96QS3 562 aa13.82□□□□□ -0.2
LRP12-205ENST00000520770 VIRMAQ69YN4 1812 aaKnown RBP13.82□□□□□ -0.2
LRP12-205ENST00000520770 UBR3Q6ZT12 1888 aa13.82□□□□□ -0.2
LRP12-205ENST00000520770 RNMTO43148 476 aaKnown RBP13.81□□□□□ -0.2
LRP12-205ENST00000520770 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
LRP12-205ENST00000520770 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
LRP12-205ENST00000520770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.8□□□□□ -0.2
LRP12-205ENST00000520770 GNPATO15228 680 aa13.8□□□□□ -0.2
LRP12-205ENST00000520770 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
LRP12-205ENST00000520770 SYT17Q9BSW7 474 aa13.8□□□□□ -0.2
LRP12-205ENST00000520770 RSPH6AQ9H0K4 717 aa13.8□□□□□ -0.2
LRP12-205ENST00000520770 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
LRP12-205ENST00000520770 U2AF1L5P0DN76 240 aaPredicted RBP13.79□□□□□ -0.2
LRP12-205ENST00000520770 U2AF1Q01081 240 aaKnown RBP eCLIP13.79□□□□□ -0.2
LRP12-205ENST00000520770 CFAP53Q96M91 514 aa13.79□□□□□ -0.2
LRP12-205ENST00000520770 SLC52A2Q9HAB3 445 aa13.79□□□□□ -0.2
LRP12-205ENST00000520770 MYH14Q7Z406 1995 aaKnown RBP13.78□□□□□ -0.2
LRP12-205ENST00000520770 SLC16A10Q8TF71 515 aa13.78□□□□□ -0.2
LRP12-205ENST00000520770 MRC1P22897 1456 aa13.78□□□□□ -0.2
LRP12-205ENST00000520770 COL5A3P25940 1745 aaPredicted RBP13.77□□□□□ -0.21
LRP12-205ENST00000520770 TJP1Q07157 1748 aa13.77□□□□□ -0.21
LRP12-205ENST00000520770 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
LRP12-205ENST00000520770 NLGN2Q8NFZ4 835 aa13.77□□□□□ -0.21
LRP12-205ENST00000520770 ADAMTS7Q9UKP4 1686 aa13.77□□□□□ -0.21
LRP12-205ENST00000520770 MAP3K5Q99683 1374 aa13.76□□□□□ -0.21
LRP12-205ENST00000520770 POLD1P28340 1107 aa13.76□□□□□ -0.21
LRP12-205ENST00000520770 DNAJC10Q8IXB1 793 aa13.75□□□□□ -0.21
LRP12-205ENST00000520770 KCPQ6ZWJ8 1503 aa13.74□□□□□ -0.21
LRP12-205ENST00000520770 GNAT3A8MTJ3 354 aa13.74□□□□□ -0.21
LRP12-205ENST00000520770 KCNQ3O43525 872 aa13.74□□□□□ -0.21
LRP12-205ENST00000520770 SSFA2P28290 1259 aa13.74□□□□□ -0.21
LRP12-205ENST00000520770 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
LRP12-205ENST00000520770 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
LRP12-205ENST00000520770 NUDCQ9Y266 331 aa13.74□□□□□ -0.21
LRP12-205ENST00000520770 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
LRP12-205ENST00000520770 MCM10Q7L590 875 aa13.73□□□□□ -0.21
LRP12-205ENST00000520770 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
LRP12-205ENST00000520770 ARHGEF1Q92888 912 aaKnown RBP13.73□□□□□ -0.21
LRP12-205ENST00000520770 SRP68Q9UHB9 627 aaKnown RBP13.73□□□□□ -0.21
LRP12-205ENST00000520770 ZNF831Q5JPB2 1677 aa13.72□□□□□ -0.21
LRP12-205ENST00000520770 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
LRP12-205ENST00000520770 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
LRP12-205ENST00000520770 WWC3Q9ULE0 1092 aa13.72□□□□□ -0.21
LRP12-205ENST00000520770 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
LRP12-205ENST00000520770 SIPA1L3O60292 1781 aaPredicted RBP13.72□□□□□ -0.21
LRP12-205ENST00000520770 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.21
LRP12-205ENST00000520770 RC3H1Q5TC82 1133 aaKnown RBP13.71□□□□□ -0.21
LRP12-205ENST00000520770 C4AP0C0L4 1744 aa13.7□□□□□ -0.22
LRP12-205ENST00000520770 RPS6KA4O75676 772 aa13.7□□□□□ -0.22
LRP12-205ENST00000520770 FCHSD2O94868 740 aa13.7□□□□□ -0.22
LRP12-205ENST00000520770 TEFQ10587 303 aa13.7□□□□□ -0.22
LRP12-205ENST00000520770 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
LRP12-205ENST00000520770 ZNF496Q96IT1 587 aaPredicted RBP13.7□□□□□ -0.22
LRP12-205ENST00000520770 UBR2Q8IWV8 1755 aa13.7□□□□□ -0.22
LRP12-205ENST00000520770 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
LRP12-205ENST00000520770 CYP19A1P11511 503 aaPredicted RBP13.69□□□□□ -0.22
LRP12-205ENST00000520770 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms