RNA–Protein interactions for RNA: ENST00000520717.1

SNTB1-205, Transcript of syntrophin beta 1, humanhuman

TSL 2

Gene SNTB1, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-205ENST00000520717 LINC00116Q8NCU8 138 aa39.59■■■■□ 3.93
SNTB1-205ENST00000520717 ATP6V1AP38606 617 aa39.58■■■■□ 3.93
SNTB1-205ENST00000520717 CABP4P57796 275 aa39.58■■■■□ 3.93
SNTB1-205ENST00000520717 UBR3Q6ZT12 1888 aa39.56■■■■□ 3.92
SNTB1-205ENST00000520717 ITPK1Q13572 414 aa39.56■■■■□ 3.92
SNTB1-205ENST00000520717 HMOX1P09601 288 aa39.55■■■■□ 3.92
SNTB1-205ENST00000520717 COL3A1P02461 1466 aaPredicted RBP39.55■■■■□ 3.92
SNTB1-205ENST00000520717 MSL1Q68DK7 614 aa39.53■■■■□ 3.92
SNTB1-205ENST00000520717 AMIGO3Q86WK7 504 aa39.53■■■■□ 3.92
SNTB1-205ENST00000520717 ZNF831Q5JPB2 1677 aa39.52■■■■□ 3.92
SNTB1-205ENST00000520717 KLHL34Q8N239 644 aa39.52■■■■□ 3.92
SNTB1-205ENST00000520717 PHF14O94880 888 aa39.51■■■■□ 3.92
SNTB1-205ENST00000520717 AKAP4Q5JQC9 854 aa39.51■■■■□ 3.92
SNTB1-205ENST00000520717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP39.5■■■■□ 3.91
SNTB1-205ENST00000520717 SSFA2P28290 1259 aa39.5■■■■□ 3.91
SNTB1-205ENST00000520717 RBM42Q9BTD8 480 aaKnown RBP39.49■■■■□ 3.91
SNTB1-205ENST00000520717 SCN11AQ9UI33 1791 aa39.49■■■■□ 3.91
SNTB1-205ENST00000520717 GNPATO15228 680 aa39.47■■■■□ 3.91
SNTB1-205ENST00000520717 YY1P25490 414 aa39.47■■■■□ 3.91
SNTB1-205ENST00000520717 NFATC2IPQ8NCF5 419 aa39.46■■■■□ 3.91
SNTB1-205ENST00000520717 SLC4A9Q96Q91 983 aa39.46■■■■□ 3.91
SNTB1-205ENST00000520717 SMIM5Q71RC9 77 aa39.45■■■■□ 3.91
SNTB1-205ENST00000520717 COL5A3P25940 1745 aaPredicted RBP39.41■■■■□ 3.9
SNTB1-205ENST00000520717 U2SURPO15042 1029 aaKnown RBP39.41■■■■□ 3.9
SNTB1-205ENST00000520717 MTHFSDQ2M296 383 aaKnown RBP39.4■■■■□ 3.9
SNTB1-205ENST00000520717 MRC1P22897 1456 aa39.4■■■■□ 3.9
SNTB1-205ENST00000520717 PTCD1O75127 700 aaKnown RBP39.38■■■■□ 3.89
SNTB1-205ENST00000520717 NLGN2Q8NFZ4 835 aa39.38■■■■□ 3.89
SNTB1-205ENST00000520717 CFAP53Q96M91 514 aa39.38■■■■□ 3.89
SNTB1-205ENST00000520717 SLC52A2Q9HAB3 445 aa39.38■■■■□ 3.89
SNTB1-205ENST00000520717 CNTNAP4Q9C0A0 1308 aa39.38■■■■□ 3.89
SNTB1-205ENST00000520717 RNMTO43148 476 aaKnown RBP39.37■■■■□ 3.89
SNTB1-205ENST00000520717 RC3H1Q5TC82 1133 aaKnown RBP39.37■■■■□ 3.89
SNTB1-205ENST00000520717 LGR6Q9HBX8 967 aa39.37■■■■□ 3.89
SNTB1-205ENST00000520717 RTCBQ9Y3I0 505 aaKnown RBP39.36■■■■□ 3.89
SNTB1-205ENST00000520717 ADAMTS7Q9UKP4 1686 aa39.35■■■■□ 3.89
SNTB1-205ENST00000520717 CICQ96RK0 1608 aaPredicted RBP39.33■■■■□ 3.89
SNTB1-205ENST00000520717 GPR162Q16538 588 aa39.33■■■■□ 3.89
SNTB1-205ENST00000520717 VIRMAQ69YN4 1812 aaKnown RBP39.33■■■■□ 3.89
SNTB1-205ENST00000520717 UTRNP46939 3433 aa39.32■■■■□ 3.89
SNTB1-205ENST00000520717 PPP2R1AP30153 589 aa39.32■■■■□ 3.89
SNTB1-205ENST00000520717 ADRA2BP18089 450 aa39.3■■■■□ 3.88
SNTB1-205ENST00000520717 TRAPPC3LQ5T215 181 aa39.3■■■■□ 3.88
SNTB1-205ENST00000520717 CD2APQ9Y5K6 639 aa39.3■■■■□ 3.88
SNTB1-205ENST00000520717 TJP1Q07157 1748 aa39.3■■■■□ 3.88
SNTB1-205ENST00000520717 RPS6KA4O75676 772 aa39.27■■■■□ 3.88
SNTB1-205ENST00000520717 PELP1Q8IZL8 1130 aaKnown RBP39.27■■■■□ 3.88
SNTB1-205ENST00000520717 GAS2L2Q8NHY3 880 aa39.27■■■■□ 3.88
SNTB1-205ENST00000520717 NUDCQ9Y266 331 aa39.26■■■■□ 3.88
SNTB1-205ENST00000520717 MYH14Q7Z406 1995 aaKnown RBP39.26■■■■□ 3.87
SNTB1-205ENST00000520717 CRKLP46109 303 aaKnown RBP39.25■■■■□ 3.87
SNTB1-205ENST00000520717 ARHGEF1Q92888 912 aaKnown RBP39.23■■■■□ 3.87
SNTB1-205ENST00000520717 SLC39A6Q13433 755 aa39.22■■■■□ 3.87
SNTB1-205ENST00000520717 RSPH6AQ9H0K4 717 aa39.22■■■■□ 3.87
SNTB1-205ENST00000520717 CHD4Q14839 1912 aa39.22■■■■□ 3.87
SNTB1-205ENST00000520717 KCPQ6ZWJ8 1503 aa39.21■■■■□ 3.87
SNTB1-205ENST00000520717 GNAT3A8MTJ3 354 aa39.21■■■■□ 3.87
SNTB1-205ENST00000520717 PRKAR2BP31323 418 aa39.21■■■■□ 3.87
SNTB1-205ENST00000520717 RFC4P35249 363 aa39.2■■■■□ 3.87
SNTB1-205ENST00000520717 C4AP0C0L4 1744 aa39.2■■■■□ 3.87
SNTB1-205ENST00000520717 GOLGB1Q14789 3259 aaKnown RBP39.2■■■■□ 3.87
SNTB1-205ENST00000520717 MMP10P09238 476 aa39.18■■■■□ 3.86
SNTB1-205ENST00000520717 NLGN1Q8N2Q7 840 aa39.18■■■■□ 3.86
SNTB1-205ENST00000520717 DNAJC10Q8IXB1 793 aa39.17■■■■□ 3.86
SNTB1-205ENST00000520717 U2AF1L5P0DN76 240 aaPredicted RBP39.16■■■■□ 3.86
SNTB1-205ENST00000520717 U2AF1Q01081 240 aaKnown RBP eCLIP39.16■■■■□ 3.86
SNTB1-205ENST00000520717 PHACTR3Q96KR7 559 aa39.16■■■■□ 3.86
SNTB1-205ENST00000520717 GYS1P13807 737 aa39.15■■■■□ 3.86
SNTB1-205ENST00000520717 UBR2Q8IWV8 1755 aa39.14■■■■□ 3.86
SNTB1-205ENST00000520717 YBX3P16989 372 aaKnown RBP eCLIP39.14■■■■□ 3.86
SNTB1-205ENST00000520717 TEFQ10587 303 aa39.14■■■■□ 3.86
SNTB1-205ENST00000520717 INTS5Q6P9B9 1019 aaKnown RBP39.14■■■■□ 3.86
SNTB1-205ENST00000520717 IL17REQ8NFR9 667 aa39.14■■■■□ 3.86
SNTB1-205ENST00000520717 CCDC87Q9NVE4 849 aa39.13■■■■□ 3.85
SNTB1-205ENST00000520717 GRIN3BO60391 1043 aa39.12■■■■□ 3.85
SNTB1-205ENST00000520717 TTC5Q8N0Z6 440 aa39.12■■■■□ 3.85
SNTB1-205ENST00000520717 VSIG10Q8N0Z9 540 aa39.11■■■■□ 3.85
SNTB1-205ENST00000520717 FCHSD2O94868 740 aa39.1■■■■□ 3.85
SNTB1-205ENST00000520717 CYP19A1P11511 503 aaPredicted RBP39.1■■■■□ 3.85
SNTB1-205ENST00000520717 CEMIPQ8WUJ3 1361 aa39.09■■■■□ 3.85
SNTB1-205ENST00000520717 SIPA1L3O60292 1781 aaPredicted RBP39.09■■■■□ 3.85
SNTB1-205ENST00000520717 USP42Q9H9J4 1324 aaKnown RBP39.09■■■■□ 3.85
SNTB1-205ENST00000520717 ZNF784Q8NCA9 323 aaPredicted RBP39.06■■■■□ 3.84
SNTB1-205ENST00000520717 SOS1Q07889 1333 aaPredicted RBP39.06■■■■□ 3.84
SNTB1-205ENST00000520717 SRP68Q9UHB9 627 aaKnown RBP39.05■■■■□ 3.84
SNTB1-205ENST00000520717 ZNF790Q6PG37 636 aa39.04■■■■□ 3.84
SNTB1-205ENST00000520717 KIF13BQ9NQT8 1826 aa39.03■■■■□ 3.84
SNTB1-205ENST00000520717 PARP3Q9Y6F1 533 aa39.03■■■■□ 3.84
SNTB1-205ENST00000520717 C10orf71Q711Q0 1435 aa39.03■■■■□ 3.84
SNTB1-205ENST00000520717 ZNF496Q96IT1 587 aaPredicted RBP39.01■■■■□ 3.84
SNTB1-205ENST00000520717 ZBTB1Q9Y2K1 713 aa39.01■■■■□ 3.84
SNTB1-205ENST00000520717 COL15A1P39059 1388 aa39■■■■□ 3.83
SNTB1-205ENST00000520717 PXDNLA1KZ92 1463 aa38.99■■■■□ 3.83
SNTB1-205ENST00000520717 HEG1Q9ULI3 1381 aa38.99■■■■□ 3.83
SNTB1-205ENST00000520717 FKBP8Q14318 412 aa38.99■■■■□ 3.83
SNTB1-205ENST00000520717 ZPR1O75312 459 aa38.98■■■■□ 3.83
SNTB1-205ENST00000520717 RTF1Q92541 710 aaKnown RBP38.98■■■■□ 3.83
SNTB1-205ENST00000520717 STARD3NLO95772 234 aa38.97■■■■□ 3.83
SNTB1-205ENST00000520717 KIAA1551Q9HCM1 1747 aa38.95■■■■□ 3.83
SNTB1-205ENST00000520717 BTBD11A6QL63 1104 aa38.95■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms