RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 SMARCC1Q92922 1105 aaPredicted RBP22.84■■□□□ 1.25
TRAM1-203ENST00000520700 KAT6BQ8WYB5 2073 aa22.84■■□□□ 1.25
TRAM1-203ENST00000520700 ITGB4P16144 1822 aa22.84■■□□□ 1.25
TRAM1-203ENST00000520700 APBA3O96018 575 aa22.83■■□□□ 1.25
TRAM1-203ENST00000520700 WWC1Q8IX03 1113 aa22.83■■□□□ 1.25
TRAM1-203ENST00000520700 CALD1Q05682 793 aaKnown RBP22.82■■□□□ 1.24
TRAM1-203ENST00000520700 ATG3Q9NT62 314 aa22.82■■□□□ 1.24
TRAM1-203ENST00000520700 BAG6P46379 1132 aa22.81■■□□□ 1.24
TRAM1-203ENST00000520700 THUMPD2Q9BTF0 503 aaKnown RBP22.81■■□□□ 1.24
TRAM1-203ENST00000520700 TNS1Q9HBL0 1735 aaKnown RBP22.8■■□□□ 1.24
TRAM1-203ENST00000520700 WDR63Q8IWG1 891 aa22.8■■□□□ 1.24
TRAM1-203ENST00000520700 ASAP1Q9ULH1 1129 aa22.8■■□□□ 1.24
TRAM1-203ENST00000520700 CAMKK2Q96RR4 588 aa22.79■■□□□ 1.24
TRAM1-203ENST00000520700 BTAF1O14981 1849 aa22.79■■□□□ 1.24
TRAM1-203ENST00000520700 VIRMAQ69YN4 1812 aaKnown RBP22.79■■□□□ 1.24
TRAM1-203ENST00000520700 IL16Q14005 1332 aa22.79■■□□□ 1.24
TRAM1-203ENST00000520700 ZNF521Q96K83 1311 aa22.79■■□□□ 1.24
TRAM1-203ENST00000520700 BTBD11A6QL63 1104 aa22.78■■□□□ 1.24
TRAM1-203ENST00000520700 SOCS7O14512 581 aa22.78■■□□□ 1.24
TRAM1-203ENST00000520700 ZNF853P0CG23 659 aa22.78■■□□□ 1.24
TRAM1-203ENST00000520700 SIPA1L3O60292 1781 aaPredicted RBP22.78■■□□□ 1.24
TRAM1-203ENST00000520700 CHL1O00533 1208 aa22.77■■□□□ 1.24
TRAM1-203ENST00000520700 HMGB2P26583 209 aaKnown RBP22.77■■□□□ 1.24
TRAM1-203ENST00000520700 ZNF790Q6PG37 636 aa22.77■■□□□ 1.24
TRAM1-203ENST00000520700 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
TRAM1-203ENST00000520700 PALLDQ8WX93 1383 aa22.76■■□□□ 1.23
TRAM1-203ENST00000520700 SLC27A3Q5K4L6 730 aa22.75■■□□□ 1.23
TRAM1-203ENST00000520700 PROM2Q8N271 834 aa22.75■■□□□ 1.23
TRAM1-203ENST00000520700 IFT57Q9NWB7 429 aa22.75■■□□□ 1.23
TRAM1-203ENST00000520700 RGPD3A6NKT7 1758 aaPredicted RBP22.75■■□□□ 1.23
TRAM1-203ENST00000520700 RGPD4Q7Z3J3 1758 aa22.75■■□□□ 1.23
TRAM1-203ENST00000520700 GNAI1P63096 354 aa22.74■■□□□ 1.23
TRAM1-203ENST00000520700 EN1Q05925 392 aaPredicted RBP22.74■■□□□ 1.23
TRAM1-203ENST00000520700 SLC39A6Q13433 755 aa22.74■■□□□ 1.23
TRAM1-203ENST00000520700 TXNRD1Q16881 649 aa22.73■■□□□ 1.23
TRAM1-203ENST00000520700 DEFB132Q7Z7B7 95 aa22.73■■□□□ 1.23
TRAM1-203ENST00000520700 VSIG10Q8N0Z9 540 aa22.73■■□□□ 1.23
TRAM1-203ENST00000520700 LOC102724428A0A0B4J2F2 783 aa22.72■■□□□ 1.23
TRAM1-203ENST00000520700 SIK1P57059 783 aa22.72■■□□□ 1.23
TRAM1-203ENST00000520700 TTC5Q8N0Z6 440 aa22.72■■□□□ 1.23
TRAM1-203ENST00000520700 SALL2Q9Y467 1007 aaPredicted RBP22.72■■□□□ 1.23
TRAM1-203ENST00000520700 PAPPAQ13219 1627 aa22.71■■□□□ 1.23
TRAM1-203ENST00000520700 SENP3-EIF4A1A0A087X0R7 540 aa22.71■■□□□ 1.23
TRAM1-203ENST00000520700 TSPYL4Q9UJ04 414 aa22.71■■□□□ 1.23
TRAM1-203ENST00000520700 KCNQ3O43525 872 aa22.7■■□□□ 1.22
TRAM1-203ENST00000520700 EZH2Q15910 746 aaKnown RBP22.7■■□□□ 1.22
TRAM1-203ENST00000520700 FMNL2Q96PY5 1086 aa22.7■■□□□ 1.22
TRAM1-203ENST00000520700 MIS18AQ9NYP9 233 aa22.7■■□□□ 1.22
TRAM1-203ENST00000520700 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
TRAM1-203ENST00000520700 LY75O60449 1722 aa22.7■■□□□ 1.22
TRAM1-203ENST00000520700 ZNF831Q5JPB2 1677 aa22.69■■□□□ 1.22
TRAM1-203ENST00000520700 EIF4A1P60842 406 aaKnown RBP22.69■■□□□ 1.22
TRAM1-203ENST00000520700 ZNF496Q96IT1 587 aaPredicted RBP22.69■■□□□ 1.22
TRAM1-203ENST00000520700 SLC4A9Q96Q91 983 aa22.69■■□□□ 1.22
TRAM1-203ENST00000520700 KCPQ6ZWJ8 1503 aa22.68■■□□□ 1.22
TRAM1-203ENST00000520700 PTCD1O75127 700 aaKnown RBP22.68■■□□□ 1.22
TRAM1-203ENST00000520700 HNRNPUQ00839 825 aaKnown RBP eCLIP22.68■■□□□ 1.22
TRAM1-203ENST00000520700 LRRC4BQ9NT99 713 aa22.68■■□□□ 1.22
TRAM1-203ENST00000520700 CCNL1Q9UK58 526 aaPredicted RBP22.68■■□□□ 1.22
TRAM1-203ENST00000520700 GOLGA2Q08379 1002 aa22.67■■□□□ 1.22
TRAM1-203ENST00000520700 RBM42Q9BTD8 480 aaKnown RBP22.67■■□□□ 1.22
TRAM1-203ENST00000520700 TEX13AQ9BXU3 409 aaPredicted RBP22.67■■□□□ 1.22
TRAM1-203ENST00000520700 MBIPQ9NS73 344 aa22.67■■□□□ 1.22
TRAM1-203ENST00000520700 UBR2Q8IWV8 1755 aa22.66■■□□□ 1.22
TRAM1-203ENST00000520700 ATP6V1AP38606 617 aa22.66■■□□□ 1.22
TRAM1-203ENST00000520700 LAS1LQ9Y4W2 734 aaKnown RBP22.66■■□□□ 1.22
TRAM1-203ENST00000520700 KDM3BQ7LBC6 1761 aa22.66■■□□□ 1.22
TRAM1-203ENST00000520700 SNRPA1P09661 255 aaKnown RBP22.64■■□□□ 1.21
TRAM1-203ENST00000520700 MYH16Q9H6N6 1097 aa22.64■■□□□ 1.21
TRAM1-203ENST00000520700 CICQ96RK0 1608 aaPredicted RBP22.64■■□□□ 1.21
TRAM1-203ENST00000520700 ZBED9Q6R2W3 1325 aa22.63■■□□□ 1.21
TRAM1-203ENST00000520700 E9PSI1 815 aa22.63■■□□□ 1.21
TRAM1-203ENST00000520700 GIGYF1O75420 1035 aaPredicted RBP22.63■■□□□ 1.21
TRAM1-203ENST00000520700 ITPK1Q13572 414 aa22.63■■□□□ 1.21
TRAM1-203ENST00000520700 TRMT2AQ8IZ69 625 aaKnown RBP22.63■■□□□ 1.21
TRAM1-203ENST00000520700 SPINK5Q9NQ38 1064 aaPredicted RBP22.63■■□□□ 1.21
TRAM1-203ENST00000520700 SLFN5Q08AF3 891 aa22.62■■□□□ 1.21
TRAM1-203ENST00000520700 RC3H1Q5TC82 1133 aaKnown RBP22.62■■□□□ 1.21
TRAM1-203ENST00000520700 RREB1Q92766 1687 aa22.62■■□□□ 1.21
TRAM1-203ENST00000520700 SOS1Q07889 1333 aaPredicted RBP22.61■■□□□ 1.21
TRAM1-203ENST00000520700 HOXB7P09629 217 aa22.61■■□□□ 1.21
TRAM1-203ENST00000520700 DNAJC10Q8IXB1 793 aa22.6■■□□□ 1.21
TRAM1-203ENST00000520700 STARD3NLO95772 234 aa22.59■■□□□ 1.21
TRAM1-203ENST00000520700 CYP19A1P11511 503 aaPredicted RBP22.59■■□□□ 1.21
TRAM1-203ENST00000520700 KCNQ4P56696 695 aa22.59■■□□□ 1.21
TRAM1-203ENST00000520700 LINC00116Q8NCU8 138 aa22.59■■□□□ 1.21
TRAM1-203ENST00000520700 CNTNAP4Q9C0A0 1308 aa22.58■■□□□ 1.21
TRAM1-203ENST00000520700 FANCIQ9NVI1 1328 aa22.58■■□□□ 1.21
TRAM1-203ENST00000520700 TSR2Q969E8 191 aaKnown RBP22.58■■□□□ 1.21
TRAM1-203ENST00000520700 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
TRAM1-203ENST00000520700 NBPF14Q5TI25 921 aa22.57■■□□□ 1.2
TRAM1-203ENST00000520700 CHMP4AQ9BY43 222 aa22.57■■□□□ 1.2
TRAM1-203ENST00000520700 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
TRAM1-203ENST00000520700 C5P01031 1676 aa22.56■■□□□ 1.2
TRAM1-203ENST00000520700 CDCA7LQ96GN5 454 aa22.56■■□□□ 1.2
TRAM1-203ENST00000520700 TJP1Q07157 1748 aa22.55■■□□□ 1.2
TRAM1-203ENST00000520700 DUSP27Q5VZP5 1158 aa22.55■■□□□ 1.2
TRAM1-203ENST00000520700 C8orf58Q8NAV2 365 aa22.55■■□□□ 1.2
TRAM1-203ENST00000520700 TAF1LQ8IZX4 1826 aa22.54■■□□□ 1.2
TRAM1-203ENST00000520700 NUP188Q5SRE5 1749 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms