RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 NOP53Q9NZM5 478 aaKnown RBP6.64□□□□□ -1.35
HMGB1P41-201ENST00000520234 MAGEB6P1A0A0J9YX57 407 aa6.63□□□□□ -1.35
HMGB1P41-201ENST00000520234 GPR37L1O60883 481 aa6.63□□□□□ -1.35
HMGB1P41-201ENST00000520234 PTK2Q05397 1052 aa6.63□□□□□ -1.35
HMGB1P41-201ENST00000520234 ZBBXA8MT70 800 aa6.62□□□□□ -1.35
HMGB1P41-201ENST00000520234 TRAK2O60296 914 aa6.62□□□□□ -1.35
HMGB1P41-201ENST00000520234 IRF5Q13568 498 aa6.62□□□□□ -1.35
HMGB1P41-201ENST00000520234 RIPOR1Q6ZS17 1223 aa6.62□□□□□ -1.35
HMGB1P41-201ENST00000520234 GDF2Q9UK05 429 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P41-201ENST00000520234 CDV3Q9UKY7 258 aaKnown RBP6.62□□□□□ -1.35
HMGB1P41-201ENST00000520234 HOXB4P17483 251 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P41-201ENST00000520234 RSPO4Q2I0M5 234 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P41-201ENST00000520234 EDARADDQ8WWZ3 215 aa6.61□□□□□ -1.35
HMGB1P41-201ENST00000520234 ZNF592Q92610 1267 aa6.61□□□□□ -1.35
HMGB1P41-201ENST00000520234 ZNF330Q9Y3S2 320 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P41-201ENST00000520234 ARID1BQ8NFD5 2236 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P41-201ENST00000520234 YBX3P16989 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
HMGB1P41-201ENST00000520234 GATA4P43694 442 aa6.6□□□□□ -1.35
HMGB1P41-201ENST00000520234 NR1H3Q13133 447 aa6.6□□□□□ -1.35
HMGB1P41-201ENST00000520234 ERFEQ4G0M1 354 aa6.6□□□□□ -1.35
HMGB1P41-201ENST00000520234 C1orf229Q6ZS94 237 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P41-201ENST00000520234 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
HMGB1P41-201ENST00000520234 ADH1AP07327 375 aa6.59□□□□□ -1.35
HMGB1P41-201ENST00000520234 SOX11P35716 441 aa6.59□□□□□ -1.35
HMGB1P41-201ENST00000520234 MCCD1P59942 119 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P41-201ENST00000520234 EIF4G2P78344 907 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGB1P41-201ENST00000520234 KCTD15Q96SI1 283 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P41-201ENST00000520234 ARHGAP9Q9BRR9 750 aa6.59□□□□□ -1.35
HMGB1P41-201ENST00000520234 CARD14Q9BXL6 1004 aa6.59□□□□□ -1.35
HMGB1P41-201ENST00000520234 DYRK1BQ9Y463 629 aa6.59□□□□□ -1.35
HMGB1P41-201ENST00000520234 FBXO45P0C2W1 286 aa6.58□□□□□ -1.36
HMGB1P41-201ENST00000520234 RHOQP17081 205 aa6.58□□□□□ -1.36
HMGB1P41-201ENST00000520234 AMPD1P23109 780 aa6.58□□□□□ -1.36
HMGB1P41-201ENST00000520234 NKAPLQ5M9Q1 402 aa6.58□□□□□ -1.36
HMGB1P41-201ENST00000520234 PRICKLE2Q7Z3G6 844 aa6.58□□□□□ -1.36
HMGB1P41-201ENST00000520234 GOLGA6L1Q8N7Z2 621 aa6.58□□□□□ -1.36
HMGB1P41-201ENST00000520234 PTGIRP43119 386 aa6.57□□□□□ -1.36
HMGB1P41-201ENST00000520234 RNF144AP50876 292 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P41-201ENST00000520234 VAC14Q08AM6 782 aa6.57□□□□□ -1.36
HMGB1P41-201ENST00000520234 LRP8Q14114 963 aa6.57□□□□□ -1.36
HMGB1P41-201ENST00000520234 ZBTB33Q86T24 672 aa6.57□□□□□ -1.36
HMGB1P41-201ENST00000520234 KLRG1Q96E93 195 aa6.57□□□□□ -1.36
HMGB1P41-201ENST00000520234 DYRK3O43781 588 aa6.56□□□□□ -1.36
HMGB1P41-201ENST00000520234 ADAM32Q8TC27 787 aa6.56□□□□□ -1.36
HMGB1P41-201ENST00000520234 SLC10A4Q96EP9 437 aa6.56□□□□□ -1.36
HMGB1P41-201ENST00000520234 OCSTAMPQ9BR26 566 aa6.55□□□□□ -1.36
HMGB1P41-201ENST00000520234 CFHR5Q9BXR6 569 aa6.55□□□□□ -1.36
HMGB1P41-201ENST00000520234 ZNF777Q9ULD5 760 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P41-201ENST00000520234 TXKP42681 527 aa6.54□□□□□ -1.36
HMGB1P41-201ENST00000520234 DGKGP49619 791 aa6.54□□□□□ -1.36
HMGB1P41-201ENST00000520234 SEMA3FQ13275 785 aa6.54□□□□□ -1.36
HMGB1P41-201ENST00000520234 INTS6LQ5JSJ4 861 aaKnown RBP6.54□□□□□ -1.36
HMGB1P41-201ENST00000520234 MCTP1Q6DN14 999 aa6.54□□□□□ -1.36
HMGB1P41-201ENST00000520234 KRTAP4-2Q9BYR5 136 aa6.54□□□□□ -1.36
HMGB1P41-201ENST00000520234 NUCKS1Q9H1E3 243 aaKnown RBP6.54□□□□□ -1.36
HMGB1P41-201ENST00000520234 ALG2Q9H553 416 aa6.54□□□□□ -1.36
HMGB1P41-201ENST00000520234 POM121CA8CG34 1229 aa6.53□□□□□ -1.36
HMGB1P41-201ENST00000520234 SLCO4C1Q6ZQN7 724 aa6.53□□□□□ -1.36
HMGB1P41-201ENST00000520234 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
HMGB1P41-201ENST00000520234 KDF1Q8NAX2 398 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P41-201ENST00000520234 GAS2L1Q99501 681 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P41-201ENST00000520234 PCDHB9Q9Y5E1 797 aa6.53□□□□□ -1.36
HMGB1P41-201ENST00000520234 PAX4O43316 350 aa6.52□□□□□ -1.37
HMGB1P41-201ENST00000520234 HDGFL1Q5TGJ6 251 aa6.52□□□□□ -1.37
HMGB1P41-201ENST00000520234 ZNF784Q8NCA9 323 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P41-201ENST00000520234 CALR3Q96L12 384 aaKnown RBP6.52□□□□□ -1.37
HMGB1P41-201ENST00000520234 SUPT5HO00267 1087 aaKnown RBP6.51□□□□□ -1.37
HMGB1P41-201ENST00000520234 GPC1P35052 558 aa6.51□□□□□ -1.37
HMGB1P41-201ENST00000520234 NBPF20Q3BBV1 942 aa6.51□□□□□ -1.37
HMGB1P41-201ENST00000520234 PRSS36Q5K4E3 855 aa6.51□□□□□ -1.37
HMGB1P41-201ENST00000520234 CCDC125Q86Z20 511 aa6.51□□□□□ -1.37
HMGB1P41-201ENST00000520234 GLMNQ92990 594 aa6.51□□□□□ -1.37
HMGB1P41-201ENST00000520234 TPSG1Q9NRR2 321 aa6.51□□□□□ -1.37
HMGB1P41-201ENST00000520234 PHF24Q9UPV7 400 aa6.51□□□□□ -1.37
HMGB1P41-201ENST00000520234 HYAL3O43820 417 aaPredicted RBP6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 LILRA1O75019 489 aa6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 SPATA31C1P0DKV0 1188 aa6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 RNF20Q5VTR2 975 aa6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 ADAMTS19Q8TE59 1207 aa6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 BTBD6Q96KE9 485 aa6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 TMPRSS4Q9NRS4 437 aa6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 CEP126Q9P2H0 1117 aa6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 SERPINA10Q9UK55 444 aa6.49□□□□□ -1.37
HMGB1P41-201ENST00000520234 ARID3CA6NKF2 412 aa6.48□□□□□ -1.37
HMGB1P41-201ENST00000520234 SEPT12Q8IYM1 358 aa6.48□□□□□ -1.37
HMGB1P41-201ENST00000520234 NFATC2IPQ8NCF5 419 aa6.48□□□□□ -1.37
HMGB1P41-201ENST00000520234 TRIM52Q96A61 297 aa6.48□□□□□ -1.37
HMGB1P41-201ENST00000520234 CCDC97Q96F63 343 aaPredicted RBP6.48□□□□□ -1.37
HMGB1P41-201ENST00000520234 ESPNB1AK53 854 aa6.47□□□□□ -1.37
HMGB1P41-201ENST00000520234 EPXP11678 715 aa6.47□□□□□ -1.37
HMGB1P41-201ENST00000520234 ADD1P35611 737 aaKnown RBP6.47□□□□□ -1.37
HMGB1P41-201ENST00000520234 SLFNL1Q499Z3 407 aa6.47□□□□□ -1.37
HMGB1P41-201ENST00000520234 C1orf115Q9H7X2 142 aa6.47□□□□□ -1.37
HMGB1P41-201ENST00000520234 GGA1Q9UJY5 639 aa6.47□□□□□ -1.37
HMGB1P41-201ENST00000520234 F11P03951 625 aa6.46□□□□□ -1.38
HMGB1P41-201ENST00000520234 WDR44Q5JSH3 913 aa6.46□□□□□ -1.38
HMGB1P41-201ENST00000520234 PHTF2Q8N3S3 785 aa6.46□□□□□ -1.38
HMGB1P41-201ENST00000520234 FMNL2Q96PY5 1086 aa6.46□□□□□ -1.38
HMGB1P41-201ENST00000520234 GIGYF1O75420 1035 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P41-201ENST00000520234 POU4F2Q12837 409 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms