RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 KIAA1210Q9ULL0 1709 aa7.22□□□□□ -1.25
SDCBP-207ENST00000520168 ZNF316A6NFI3 1004 aaPredicted RBP7.22□□□□□ -1.25
SDCBP-207ENST00000520168 GCP02774 474 aa7.22□□□□□ -1.25
SDCBP-207ENST00000520168 HSPA6P17066 643 aa7.22□□□□□ -1.25
SDCBP-207ENST00000520168 NUDT16Q96DE0 195 aaKnown RBP7.22□□□□□ -1.25
SDCBP-207ENST00000520168 TRAK1Q9UPV9 953 aa7.22□□□□□ -1.25
SDCBP-207ENST00000520168 ACEP12821 1306 aa7.22□□□□□ -1.25
SDCBP-207ENST00000520168 KAT6BQ8WYB5 2073 aa7.21□□□□□ -1.25
SDCBP-207ENST00000520168 TNS2Q63HR2 1409 aa7.21□□□□□ -1.25
SDCBP-207ENST00000520168 PLEKHG3A1L390 1219 aa7.21□□□□□ -1.26
SDCBP-207ENST00000520168 NUTM2GQ5VZR2 741 aa7.21□□□□□ -1.26
SDCBP-207ENST00000520168 TOM1L2Q6ZVM7 507 aa7.21□□□□□ -1.26
SDCBP-207ENST00000520168 MPHOSPH9Q99550 1183 aa7.21□□□□□ -1.26
SDCBP-207ENST00000520168 MFRPQ9BY79 579 aa7.21□□□□□ -1.26
SDCBP-207ENST00000520168 WDR17Q8IZU2 1322 aa7.21□□□□□ -1.26
SDCBP-207ENST00000520168 CCDC7Q96M83 1385 aa7.2□□□□□ -1.26
SDCBP-207ENST00000520168 STK25O00506 426 aa7.2□□□□□ -1.26
SDCBP-207ENST00000520168 KIF3CO14782 793 aa7.2□□□□□ -1.26
SDCBP-207ENST00000520168 MARCH10Q8NA82 808 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-207ENST00000520168 GPBP1L1Q9HC44 474 aaPredicted RBP7.2□□□□□ -1.26
SDCBP-207ENST00000520168 LY75O60449 1722 aa7.2□□□□□ -1.26
SDCBP-207ENST00000520168 ATP10DQ9P241 1426 aa7.19□□□□□ -1.26
SDCBP-207ENST00000520168 EXOC5O00471 708 aa7.19□□□□□ -1.26
SDCBP-207ENST00000520168 KHSRPQ92945 711 aaKnown RBP eCLIP7.19□□□□□ -1.265e-6■■■■□ 22.3
SDCBP-207ENST00000520168 FAM208AQ9UK61 1670 aaKnown RBP7.19□□□□□ -1.26
SDCBP-207ENST00000520168 CPSF1Q10570 1443 aaKnown RBP7.18□□□□□ -1.26
SDCBP-207ENST00000520168 C2orf72A6NCS6 295 aa7.18□□□□□ -1.26
SDCBP-207ENST00000520168 ANKRD13DQ6ZTN6 518 aa7.18□□□□□ -1.26
SDCBP-207ENST00000520168 PTF1AQ7RTS3 328 aa7.18□□□□□ -1.26
SDCBP-207ENST00000520168 CARD10Q9BWT7 1032 aa7.18□□□□□ -1.26
SDCBP-207ENST00000520168 ADCY9O60503 1353 aa7.18□□□□□ -1.26
SDCBP-207ENST00000520168 WDR90Q96KV7 1748 aa7.18□□□□□ -1.26
SDCBP-207ENST00000520168 LTN1O94822 1766 aa7.18□□□□□ -1.26
SDCBP-207ENST00000520168 PPIP5K1Q6PFW1 1433 aa7.18□□□□□ -1.26
SDCBP-207ENST00000520168 USP54Q70EL1 1684 aa7.17□□□□□ -1.26
SDCBP-207ENST00000520168 ECM2O94769 699 aaPredicted RBP7.17□□□□□ -1.26
SDCBP-207ENST00000520168 HMGB2P26583 209 aaKnown RBP7.17□□□□□ -1.26
SDCBP-207ENST00000520168 LSM11P83369 360 aaKnown RBP eCLIP7.17□□□□□ -1.26
SDCBP-207ENST00000520168 SLC27A3Q5K4L6 730 aa7.17□□□□□ -1.26
SDCBP-207ENST00000520168 CDK19Q9BWU1 502 aa7.17□□□□□ -1.26
SDCBP-207ENST00000520168 USP6P35125 1406 aa7.17□□□□□ -1.26
SDCBP-207ENST00000520168 SLC34A2O95436 690 aa7.16□□□□□ -1.26
SDCBP-207ENST00000520168 PBX2P40425 430 aa7.16□□□□□ -1.26
SDCBP-207ENST00000520168 APLP1P51693 650 aa7.16□□□□□ -1.26
SDCBP-207ENST00000520168 KCNH5Q8NCM2 988 aa7.16□□□□□ -1.26
SDCBP-207ENST00000520168 ZNF827Q17R98 1081 aa7.15□□□□□ -1.26
SDCBP-207ENST00000520168 C5P01031 1676 aa7.15□□□□□ -1.27
SDCBP-207ENST00000520168 DOT1LQ8TEK3 1739 aa7.15□□□□□ -1.27
SDCBP-207ENST00000520168 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
SDCBP-207ENST00000520168 NFAT5O94916 1531 aa7.14□□□□□ -1.27
SDCBP-207ENST00000520168 NUDT7P0C024 238 aa7.14□□□□□ -1.27
SDCBP-207ENST00000520168 CSB-PGBD3P0DP91 1061 aa7.14□□□□□ -1.27
SDCBP-207ENST00000520168 YBX3P16989 372 aaKnown RBP eCLIP7.14□□□□□ -1.27
SDCBP-207ENST00000520168 NLGN2Q8NFZ4 835 aa7.14□□□□□ -1.27
SDCBP-207ENST00000520168 CICQ96RK0 1608 aaPredicted RBP7.14□□□□□ -1.27
SDCBP-207ENST00000520168 TFCP2L1Q9NZI6 479 aa7.14□□□□□ -1.27
SDCBP-207ENST00000520168 TAF1LQ8IZX4 1826 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 PNPLA7Q6ZV29 1317 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 ARHGEF25Q86VW2 580 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 TMC2Q8TDI7 906 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 DCAF11Q8TEB1 546 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 AXIN2Q9Y2T1 843 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 PCDHGA4Q9Y5G9 962 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 CD2APQ9Y5K6 639 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 MON2Q7Z3U7 1717 aa7.13□□□□□ -1.27
SDCBP-207ENST00000520168 SRPK2P78362 688 aaKnown RBP7.12□□□□□ -1.27
SDCBP-207ENST00000520168 LRRC4BQ9NT99 713 aa7.12□□□□□ -1.27
SDCBP-207ENST00000520168 LHX6Q9UPM6 363 aa7.12□□□□□ -1.27
SDCBP-207ENST00000520168 TTC21AQ8NDW8 1320 aa7.11□□□□□ -1.27
SDCBP-207ENST00000520168 IL2RBP14784 551 aa7.11□□□□□ -1.27
SDCBP-207ENST00000520168 PPARGC1BQ86YN6 1023 aaKnown RBP7.11□□□□□ -1.27
SDCBP-207ENST00000520168 ACSBG1Q96GR2 724 aa7.11□□□□□ -1.27
SDCBP-207ENST00000520168 KIF13BQ9NQT8 1826 aa7.11□□□□□ -1.27
SDCBP-207ENST00000520168 RGL2O15211 777 aa7.1□□□□□ -1.27
SDCBP-207ENST00000520168 TOMM70O94826 608 aa7.1□□□□□ -1.27
SDCBP-207ENST00000520168 PRELPP51888 382 aa7.1□□□□□ -1.27
SDCBP-207ENST00000520168 DNAJC5GQ8N7S2 189 aa7.1□□□□□ -1.27
SDCBP-207ENST00000520168 KDM2AQ9Y2K7 1162 aa7.1□□□□□ -1.27
SDCBP-207ENST00000520168 NSD3Q9BZ95 1437 aa7.1□□□□□ -1.27
SDCBP-207ENST00000520168 TNRC6CQ9HCJ0 1690 aaKnown RBP7.09□□□□□ -1.27
SDCBP-207ENST00000520168 ANKRD36BQ8N2N9 1353 aa7.09□□□□□ -1.27
SDCBP-207ENST00000520168 CENPJQ9HC77 1338 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-207ENST00000520168 POTEEQ6S8J3 1075 aa7.09□□□□□ -1.27
SDCBP-207ENST00000520168 FLAD1Q8NFF5 587 aa7.09□□□□□ -1.27
SDCBP-207ENST00000520168 ZNF526Q8TF50 670 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-207ENST00000520168 UBR3Q6ZT12 1888 aa7.09□□□□□ -1.28
SDCBP-207ENST00000520168 PKD1L3Q7Z443 1732 aa7.08□□□□□ -1.28
SDCBP-207ENST00000520168 JMYQ8N9B5 988 aa7.08□□□□□ -1.28
SDCBP-207ENST00000520168 CABP1Q9NZU7 370 aa7.08□□□□□ -1.28
SDCBP-207ENST00000520168 DAXXQ9UER7 740 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-207ENST00000520168 BRCA1P38398 1863 aaKnown RBP7.08□□□□□ -1.28
SDCBP-207ENST00000520168 ARFGEF1Q9Y6D6 1849 aa7.08□□□□□ -1.28
SDCBP-207ENST00000520168 C4BP0C0L5 1744 aa7.07□□□□□ -1.28
SDCBP-207ENST00000520168 TTC21BQ7Z4L5 1316 aa7.07□□□□□ -1.28
SDCBP-207ENST00000520168 TNS4Q8IZW8 715 aa7.07□□□□□ -1.28
SDCBP-207ENST00000520168 KLRG1Q96E93 195 aa7.07□□□□□ -1.28
SDCBP-207ENST00000520168 NLRP2Q9NX02 1062 aa7.07□□□□□ -1.28
SDCBP-207ENST00000520168 USP47Q96K76 1375 aa7.07□□□□□ -1.28
SDCBP-207ENST00000520168 EVC2Q86UK5 1308 aa7.06□□□□□ -1.28
SDCBP-207ENST00000520168 ARHGAP33O14559 1287 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms