RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 EIF4A1P60842 406 aaKnown RBP34.01■■■■□ 3.03
COL13A1-212ENST00000520133 MEGF6O75095 1541 aa34■■■■□ 3.03
COL13A1-212ENST00000520133 SIPA1L3O60292 1781 aaPredicted RBP33.99■■■■□ 3.03
COL13A1-212ENST00000520133 FAM161AQ3B820 660 aa33.98■■■■□ 3.03
COL13A1-212ENST00000520133 SMC5Q8IY18 1101 aa33.98■■■■□ 3.03
COL13A1-212ENST00000520133 SCN11AQ9UI33 1791 aa33.98■■■■□ 3.03
COL13A1-212ENST00000520133 G2E3Q7L622 706 aa33.97■■■■□ 3.03
COL13A1-212ENST00000520133 WDR17Q8IZU2 1322 aa33.97■■■■□ 3.03
COL13A1-212ENST00000520133 HDGFL1Q5TGJ6 251 aa33.97■■■■□ 3.03
COL13A1-212ENST00000520133 PKD1L3Q7Z443 1732 aa33.96■■■■□ 3.03
COL13A1-212ENST00000520133 IFNL2Q8IZJ0 200 aa33.95■■■■□ 3.03
COL13A1-212ENST00000520133 FLIIQ13045 1269 aa33.95■■■■□ 3.02
COL13A1-212ENST00000520133 PHKG2P15735 406 aa33.94■■■■□ 3.02
COL13A1-212ENST00000520133 CCT4P50991 539 aaKnown RBP33.94■■■■□ 3.02
COL13A1-212ENST00000520133 NECTIN2Q92692 538 aa33.93■■■■□ 3.02
COL13A1-212ENST00000520133 C1orf115Q9H7X2 142 aa33.93■■■■□ 3.02
COL13A1-212ENST00000520133 COL5A2P05997 1499 aaPredicted RBP33.92■■■■□ 3.02
COL13A1-212ENST00000520133 FKBP5Q13451 457 aaPredicted RBP33.91■■■■□ 3.02
COL13A1-212ENST00000520133 TOM1L2Q6ZVM7 507 aa33.91■■■■□ 3.02
COL13A1-212ENST00000520133 PARP4Q9UKK3 1724 aaKnown RBP33.91■■■■□ 3.02
COL13A1-212ENST00000520133 ROBO1Q9Y6N7 1651 aa33.91■■■■□ 3.02
COL13A1-212ENST00000520133 KCNQ3O43525 872 aa33.9■■■■□ 3.02
COL13A1-212ENST00000520133 ANP32AP39687 249 aaKnown RBP33.9■■■■□ 3.02
COL13A1-212ENST00000520133 GCC1Q96CN9 775 aa33.9■■■■□ 3.02
COL13A1-212ENST00000520133 HSP90AB1P08238 724 aaKnown RBP33.89■■■■□ 3.02
COL13A1-212ENST00000520133 LTBP4Q8N2S1 1624 aa33.88■■■■□ 3.01
COL13A1-212ENST00000520133 C8orf34Q49A92 452 aa33.88■■■■□ 3.01
COL13A1-212ENST00000520133 SLC4A10Q6U841 1118 aa33.88■■■■□ 3.01
COL13A1-212ENST00000520133 KDM6AO15550 1401 aaPredicted RBP33.87■■■■□ 3.01
COL13A1-212ENST00000520133 EIF2S2P20042 333 aaKnown RBP33.87■■■■□ 3.01
COL13A1-212ENST00000520133 F6X3S4 739 aa33.86■■■■□ 3.01
COL13A1-212ENST00000520133 SLC52A2Q9HAB3 445 aa33.86■■■■□ 3.01
COL13A1-212ENST00000520133 DCAF5Q96JK2 942 aa33.86■■■■□ 3.01
COL13A1-212ENST00000520133 AHDC1Q5TGY3 1603 aaPredicted RBP33.85■■■■□ 3.01
COL13A1-212ENST00000520133 N4BP2Q86UW6 1770 aaPredicted RBP33.85■■■■□ 3.01
COL13A1-212ENST00000520133 HEG1Q9ULI3 1381 aa33.84■■■■□ 3.01
COL13A1-212ENST00000520133 CARD10Q9BWT7 1032 aa33.84■■■■□ 3.01
COL13A1-212ENST00000520133 PXDNLA1KZ92 1463 aa33.83■■■■□ 3.01
COL13A1-212ENST00000520133 CYP27B1O15528 508 aa33.83■■■■□ 3.01
COL13A1-212ENST00000520133 NUCB1Q02818 461 aa33.83■■■■□ 3.01
COL13A1-212ENST00000520133 SIRT2Q8IXJ6 389 aa33.83■■■■□ 3.01
COL13A1-212ENST00000520133 RPAP2Q8IXW5 612 aaPredicted RBP33.83■■■■□ 3.01
COL13A1-212ENST00000520133 EVA1CP58658 441 aa33.82■■■■□ 3
COL13A1-212ENST00000520133 GIGYF1O75420 1035 aaPredicted RBP33.81■■■■□ 3
COL13A1-212ENST00000520133 MEIS3Q99687 375 aa33.81■■■■□ 3
COL13A1-212ENST00000520133 MRC1P22897 1456 aa33.8■■■■□ 3
COL13A1-212ENST00000520133 ANKRD44Q8N8A2 993 aa33.79■■■■□ 3
COL13A1-212ENST00000520133 CHPF2Q9P2E5 772 aa33.79■■■■□ 3
COL13A1-212ENST00000520133 DBF4Q9UBU7 674 aaPredicted RBP33.79■■■■□ 3
COL13A1-212ENST00000520133 ZNF790Q6PG37 636 aa33.79■■■■□ 3
COL13A1-212ENST00000520133 STRN4Q9NRL3 753 aa33.79■■■■□ 3
COL13A1-212ENST00000520133 PCDH11XQ9BZA7 1347 aa33.78■■■■□ 3
COL13A1-212ENST00000520133 PCDH11YQ9BZA8 1340 aa33.78■■■■□ 3
COL13A1-212ENST00000520133 ATP10DQ9P241 1426 aa33.78■■■■□ 3
COL13A1-212ENST00000520133 CHD1LQ86WJ1 897 aa33.78■■■■□ 3
COL13A1-212ENST00000520133 NFATC2IPQ8NCF5 419 aa33.78■■■■□ 3
COL13A1-212ENST00000520133 ZCRB1Q8TBF4 217 aaKnown RBP33.78■■■■□ 3
COL13A1-212ENST00000520133 PHAXQ9H814 394 aaKnown RBP33.78■■■■□ 3
COL13A1-212ENST00000520133 IL2RBP14784 551 aa33.76■■■■□ 3
COL13A1-212ENST00000520133 COL22A1Q8NFW1 1626 aaPredicted RBP33.76■■■■□ 3
COL13A1-212ENST00000520133 CEP85Q6P2H3 762 aa33.75■■■□□ 2.99
COL13A1-212ENST00000520133 NPM2Q86SE8 214 aaKnown RBP33.75■■■□□ 2.99
COL13A1-212ENST00000520133 GNAI3P08754 354 aa33.74■■■□□ 2.99
COL13A1-212ENST00000520133 LARP1Q6PKG0 1096 aaKnown RBP33.74■■■□□ 2.99
COL13A1-212ENST00000520133 ANKRD45Q5TZF3 282 aa33.74■■■□□ 2.99
COL13A1-212ENST00000520133 COL14A1Q05707 1796 aaKnown RBP33.73■■■□□ 2.99
COL13A1-212ENST00000520133 LNPKQ9C0E8 428 aa33.72■■■□□ 2.99
COL13A1-212ENST00000520133 DCTPP1Q9H773 170 aa33.72■■■□□ 2.99
COL13A1-212ENST00000520133 CABP4P57796 275 aa33.72■■■□□ 2.99
COL13A1-212ENST00000520133 GNAI2P04899 355 aa33.71■■■□□ 2.99
COL13A1-212ENST00000520133 SLC39A6Q13433 755 aa33.71■■■□□ 2.99
COL13A1-212ENST00000520133 TTC5Q8N0Z6 440 aa33.71■■■□□ 2.99
COL13A1-212ENST00000520133 HMMRO75330 724 aa33.7■■■□□ 2.99
COL13A1-212ENST00000520133 IPO9Q96P70 1041 aaKnown RBP33.69■■■□□ 2.98
COL13A1-212ENST00000520133 BTG4Q9NY30 223 aa33.69■■■□□ 2.98
COL13A1-212ENST00000520133 HYPKQ9NX55 129 aa33.68■■■□□ 2.98
COL13A1-212ENST00000520133 DNAAF4Q8WXU2 420 aa33.67■■■□□ 2.98
COL13A1-212ENST00000520133 SRCIN1Q9C0H9 1055 aa33.67■■■□□ 2.98
COL13A1-212ENST00000520133 PRAMEF22A3QJZ6 481 aa33.65■■■□□ 2.98
COL13A1-212ENST00000520133 PI4KAP2A4QPH2 592 aa33.65■■■□□ 2.98
COL13A1-212ENST00000520133 PI4KAP1Q8N8J0 262 aa33.65■■■□□ 2.98
COL13A1-212ENST00000520133 DDX21Q9NR30 783 aaKnown RBP eCLIP33.65■■■□□ 2.98
COL13A1-212ENST00000520133 ZBTB47Q9UFB7 747 aaPredicted RBP33.65■■■□□ 2.98
COL13A1-212ENST00000520133 PHLPP1O60346 1717 aa33.65■■■□□ 2.98
COL13A1-212ENST00000520133 C5P01031 1676 aa33.65■■■□□ 2.98
COL13A1-212ENST00000520133 SHANK3Q9BYB0 1731 aa33.65■■■□□ 2.98
COL13A1-212ENST00000520133 MSH5O43196 834 aa33.65■■■□□ 2.98
COL13A1-212ENST00000520133 ANXA1P04083 346 aa33.65■■■□□ 2.98
COL13A1-212ENST00000520133 NKX1-1Q15270 411 aaPredicted RBP33.65■■■□□ 2.98
COL13A1-212ENST00000520133 ERVV-2B6SEH9 535 aa33.64■■■□□ 2.98
COL13A1-212ENST00000520133 FMNL2Q96PY5 1086 aa33.64■■■□□ 2.98
COL13A1-212ENST00000520133 ZNF496Q96IT1 587 aaPredicted RBP33.63■■■□□ 2.97
COL13A1-212ENST00000520133 SNRPA1P09661 255 aaKnown RBP33.63■■■□□ 2.97
COL13A1-212ENST00000520133 UBTFL1P0CB47 393 aaPredicted RBP33.61■■■□□ 2.97
COL13A1-212ENST00000520133 USP44Q9H0E7 712 aa33.61■■■□□ 2.97
COL13A1-212ENST00000520133 COL16A1Q07092 1604 aaPredicted RBP33.61■■■□□ 2.97
COL13A1-212ENST00000520133 PROSER3Q2NL68 480 aa33.6■■■□□ 2.97
COL13A1-212ENST00000520133 ADCY9O60503 1353 aa33.6■■■□□ 2.97
COL13A1-212ENST00000520133 TOM1O60784 492 aa33.59■■■□□ 2.97
COL13A1-212ENST00000520133 DDX58O95786 925 aaKnown RBP33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms