RNA–Protein interactions for RNA: ENST00000519984.1

CHMP7-207, Transcript of charged multivesicular body protein 7, humanhuman

TSL 3

Gene CHMP7, Length 666 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-207ENST00000519984 SMIM5Q71RC9 77 aa28.33■■■□□ 2.13
CHMP7-207ENST00000519984 LINC00116Q8NCU8 138 aa28.33■■■□□ 2.13
CHMP7-207ENST00000519984 SLC4A9Q96Q91 983 aa28.33■■■□□ 2.13
CHMP7-207ENST00000519984 PPP1R1BQ9UD71 204 aaPredicted RBP28.33■■■□□ 2.13
CHMP7-207ENST00000519984 NFATC2IPQ8NCF5 419 aa28.32■■■□□ 2.12
CHMP7-207ENST00000519984 COL23A1Q86Y22 540 aaPredicted RBP28.31■■■□□ 2.12
CHMP7-207ENST00000519984 ADAMTS7Q9UKP4 1686 aa28.31■■■□□ 2.12
CHMP7-207ENST00000519984 ATP6V1AP38606 617 aa28.3■■■□□ 2.12
CHMP7-207ENST00000519984 RSPH6AQ9H0K4 717 aa28.3■■■□□ 2.12
CHMP7-207ENST00000519984 UBR3Q6ZT12 1888 aa28.29■■■□□ 2.12
CHMP7-207ENST00000519984 MRC1P22897 1456 aa28.29■■■□□ 2.12
CHMP7-207ENST00000519984 RNMTO43148 476 aaKnown RBP28.29■■■□□ 2.12
CHMP7-207ENST00000519984 PHACTR3Q96KR7 559 aa28.29■■■□□ 2.12
CHMP7-207ENST00000519984 PRKAR2BP31323 418 aa28.28■■■□□ 2.12
CHMP7-207ENST00000519984 RBM42Q9BTD8 480 aaKnown RBP28.28■■■□□ 2.12
CHMP7-207ENST00000519984 COL24A1Q17RW2 1714 aa28.27■■■□□ 2.12
CHMP7-207ENST00000519984 MSH5O43196 834 aa28.26■■■□□ 2.11
CHMP7-207ENST00000519984 U2AF1L5P0DN76 240 aaPredicted RBP28.26■■■□□ 2.11
CHMP7-207ENST00000519984 U2AF1Q01081 240 aaKnown RBP eCLIP28.26■■■□□ 2.11
CHMP7-207ENST00000519984 AK7Q96M32 723 aa28.26■■■□□ 2.11
CHMP7-207ENST00000519984 SLC52A2Q9HAB3 445 aa28.26■■■□□ 2.11
CHMP7-207ENST00000519984 NUDCQ9Y266 331 aa28.25■■■□□ 2.11
CHMP7-207ENST00000519984 ZNF831Q5JPB2 1677 aa28.25■■■□□ 2.11
CHMP7-207ENST00000519984 COL5A3P25940 1745 aaPredicted RBP28.24■■■□□ 2.11
CHMP7-207ENST00000519984 PTCD1O75127 700 aaKnown RBP28.24■■■□□ 2.11
CHMP7-207ENST00000519984 SLC16A10Q8TF71 515 aa28.24■■■□□ 2.11
CHMP7-207ENST00000519984 PHF14O94880 888 aa28.23■■■□□ 2.11
CHMP7-207ENST00000519984 MAP3K5Q99683 1374 aa28.23■■■□□ 2.11
CHMP7-207ENST00000519984 MSL1Q68DK7 614 aa28.22■■■□□ 2.11
CHMP7-207ENST00000519984 TJP1Q07157 1748 aa28.21■■■□□ 2.11
CHMP7-207ENST00000519984 SLC39A6Q13433 755 aa28.21■■■□□ 2.11
CHMP7-207ENST00000519984 GAS2L2Q8NHY3 880 aa28.21■■■□□ 2.11
CHMP7-207ENST00000519984 ZEB1P37275 1124 aaPredicted RBP28.2■■■□□ 2.1
CHMP7-207ENST00000519984 IL17REQ8NFR9 667 aa28.2■■■□□ 2.1
CHMP7-207ENST00000519984 ARXQ96QS3 562 aa28.2■■■□□ 2.1
CHMP7-207ENST00000519984 FHDC1Q9C0D6 1143 aaPredicted RBP28.2■■■□□ 2.1
CHMP7-207ENST00000519984 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.19■■■□□ 2.1
CHMP7-207ENST00000519984 GNPATO15228 680 aa28.19■■■□□ 2.1
CHMP7-207ENST00000519984 MYH14Q7Z406 1995 aaKnown RBP28.19■■■□□ 2.1
CHMP7-207ENST00000519984 GNAT3A8MTJ3 354 aa28.18■■■□□ 2.1
CHMP7-207ENST00000519984 FCHSD2O94868 740 aa28.17■■■□□ 2.1
CHMP7-207ENST00000519984 KCPQ6ZWJ8 1503 aa28.17■■■□□ 2.1
CHMP7-207ENST00000519984 RALBP1Q15311 655 aa28.16■■■□□ 2.1
CHMP7-207ENST00000519984 CICQ96RK0 1608 aaPredicted RBP28.16■■■□□ 2.1
CHMP7-207ENST00000519984 SIPA1L3O60292 1781 aaPredicted RBP28.16■■■□□ 2.1
CHMP7-207ENST00000519984 HMGB2P26583 209 aaKnown RBP28.15■■■□□ 2.1
CHMP7-207ENST00000519984 SSFA2P28290 1259 aa28.15■■■□□ 2.1
CHMP7-207ENST00000519984 FLAD1Q8NFF5 587 aa28.15■■■□□ 2.1
CHMP7-207ENST00000519984 SYT17Q9BSW7 474 aa28.14■■■□□ 2.1
CHMP7-207ENST00000519984 POLD1P28340 1107 aa28.13■■■□□ 2.09
CHMP7-207ENST00000519984 UBR2Q8IWV8 1755 aa28.13■■■□□ 2.09
CHMP7-207ENST00000519984 CNTNAP4Q9C0A0 1308 aa28.13■■■□□ 2.09
CHMP7-207ENST00000519984 CEMIPQ8WUJ3 1361 aa28.11■■■□□ 2.09
CHMP7-207ENST00000519984 DNAJC10Q8IXB1 793 aa28.11■■■□□ 2.09
CHMP7-207ENST00000519984 CRKLP46109 303 aaKnown RBP28.1■■■□□ 2.09
CHMP7-207ENST00000519984 KLHL34Q8N239 644 aa28.1■■■□□ 2.09
CHMP7-207ENST00000519984 TEFQ10587 303 aa28.09■■■□□ 2.09
CHMP7-207ENST00000519984 RC3H1Q5TC82 1133 aaKnown RBP28.09■■■□□ 2.09
CHMP7-207ENST00000519984 MYBBP1AQ9BQG0 1328 aaKnown RBP28.09■■■□□ 2.09
CHMP7-207ENST00000519984 MCM10Q7L590 875 aa28.08■■■□□ 2.09
CHMP7-207ENST00000519984 PLEKHF1Q96S99 279 aa28.08■■■□□ 2.09
CHMP7-207ENST00000519984 RTCBQ9Y3I0 505 aaKnown RBP28.08■■■□□ 2.09
CHMP7-207ENST00000519984 C4AP0C0L4 1744 aa28.08■■■□□ 2.09
CHMP7-207ENST00000519984 DCTN1Q14203 1278 aa28.07■■■□□ 2.08
CHMP7-207ENST00000519984 DLG5Q8TDM6 1919 aa28.06■■■□□ 2.08
CHMP7-207ENST00000519984 RPS6KA4O75676 772 aa28.06■■■□□ 2.08
CHMP7-207ENST00000519984 INTS5Q6P9B9 1019 aaKnown RBP28.05■■■□□ 2.08
CHMP7-207ENST00000519984 ARHGEF1Q92888 912 aaKnown RBP28.05■■■□□ 2.08
CHMP7-207ENST00000519984 KCNQ3O43525 872 aa28.04■■■□□ 2.08
CHMP7-207ENST00000519984 TRAPPC3LQ5T215 181 aa28.04■■■□□ 2.08
CHMP7-207ENST00000519984 ZNF790Q6PG37 636 aa28.03■■■□□ 2.08
CHMP7-207ENST00000519984 NLGN2Q8NFZ4 835 aa28.03■■■□□ 2.08
CHMP7-207ENST00000519984 ZNF496Q96IT1 587 aaPredicted RBP28.03■■■□□ 2.08
CHMP7-207ENST00000519984 PRKRIP1Q9H875 184 aaPredicted RBP28.03■■■□□ 2.08
CHMP7-207ENST00000519984 CYP19A1P11511 503 aaPredicted RBP28.02■■■□□ 2.08
CHMP7-207ENST00000519984 TTC5Q8N0Z6 440 aa28.02■■■□□ 2.08
CHMP7-207ENST00000519984 RTF1Q92541 710 aaKnown RBP28.01■■■□□ 2.07
CHMP7-207ENST00000519984 CCDC87Q9NVE4 849 aa28■■■□□ 2.07
CHMP7-207ENST00000519984 BTBD11A6QL63 1104 aa27.99■■■□□ 2.07
CHMP7-207ENST00000519984 ADRA2BP18089 450 aa27.99■■■□□ 2.07
CHMP7-207ENST00000519984 SRP68Q9UHB9 627 aaKnown RBP27.99■■■□□ 2.07
CHMP7-207ENST00000519984 ZBTB1Q9Y2K1 713 aa27.99■■■□□ 2.07
CHMP7-207ENST00000519984 VSIG10Q8N0Z9 540 aa27.98■■■□□ 2.07
CHMP7-207ENST00000519984 HEG1Q9ULI3 1381 aa27.98■■■□□ 2.07
CHMP7-207ENST00000519984 GYS1P13807 737 aa27.97■■■□□ 2.07
CHMP7-207ENST00000519984 RFC4P35249 363 aa27.97■■■□□ 2.07
CHMP7-207ENST00000519984 SOS1Q07889 1333 aaPredicted RBP27.96■■■□□ 2.07
CHMP7-207ENST00000519984 NFE2L2Q16236 605 aa27.96■■■□□ 2.07
CHMP7-207ENST00000519984 THUMPD2Q9BTF0 503 aaKnown RBP27.96■■■□□ 2.07
CHMP7-207ENST00000519984 HTATSF1O43719 755 aaKnown RBP27.95■■■□□ 2.06
CHMP7-207ENST00000519984 NEFMP07197 916 aa27.95■■■□□ 2.06
CHMP7-207ENST00000519984 MMP10P09238 476 aa27.95■■■□□ 2.06
CHMP7-207ENST00000519984 MAPK8IP3Q9UPT6 1336 aa27.94■■■□□ 2.06
CHMP7-207ENST00000519984 ZNF316A6NFI3 1004 aaPredicted RBP27.94■■■□□ 2.06
CHMP7-207ENST00000519984 USP42Q9H9J4 1324 aaKnown RBP27.93■■■□□ 2.06
CHMP7-207ENST00000519984 PRAMEF22A3QJZ6 481 aa27.92■■■□□ 2.06
CHMP7-207ENST00000519984 CCDC146Q8IYE0 955 aa27.92■■■□□ 2.06
CHMP7-207ENST00000519984 FMNL2Q96PY5 1086 aa27.92■■■□□ 2.06
CHMP7-207ENST00000519984 MIS18AQ9NYP9 233 aa27.92■■■□□ 2.06
CHMP7-207ENST00000519984 UTRNP46939 3433 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms