RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
CSMD1-205ENST00000519623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.98■□□□□ 0.31
CSMD1-205ENST00000519623 HSP90AB1P08238 724 aaKnown RBP16.98■□□□□ 0.31
CSMD1-205ENST00000519623 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
CSMD1-205ENST00000519623 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
CSMD1-205ENST00000519623 SULT6B1Q6IMI4 303 aa16.97■□□□□ 0.31
CSMD1-205ENST00000519623 ZNF784Q8NCA9 323 aaPredicted RBP16.97■□□□□ 0.31
CSMD1-205ENST00000519623 SLC4A9Q96Q91 983 aa16.97■□□□□ 0.31
CSMD1-205ENST00000519623 PHF14O94880 888 aa16.96■□□□□ 0.31
CSMD1-205ENST00000519623 SSFA2P28290 1259 aa16.96■□□□□ 0.31
CSMD1-205ENST00000519623 KDRP35968 1356 aa16.96■□□□□ 0.31
CSMD1-205ENST00000519623 KDM6AO15550 1401 aaPredicted RBP16.96■□□□□ 0.3
CSMD1-205ENST00000519623 MTHFSP49914 203 aa16.95■□□□□ 0.3
CSMD1-205ENST00000519623 CD2APQ9Y5K6 639 aa16.95■□□□□ 0.3
CSMD1-205ENST00000519623 GNPATO15228 680 aa16.94■□□□□ 0.3
CSMD1-205ENST00000519623 YBX3P16989 372 aaKnown RBP eCLIP16.94■□□□□ 0.3
CSMD1-205ENST00000519623 CABP4P57796 275 aa16.94■□□□□ 0.3
CSMD1-205ENST00000519623 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
CSMD1-205ENST00000519623 GOLGB1Q14789 3259 aaKnown RBP16.93■□□□□ 0.3
CSMD1-205ENST00000519623 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
CSMD1-205ENST00000519623 RC3H1Q5TC82 1133 aaKnown RBP16.92■□□□□ 0.3
CSMD1-205ENST00000519623 NFATC2IPQ8NCF5 419 aa16.92■□□□□ 0.3
CSMD1-205ENST00000519623 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
CSMD1-205ENST00000519623 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
CSMD1-205ENST00000519623 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
CSMD1-205ENST00000519623 GRIN3BO60391 1043 aa16.9■□□□□ 0.3
CSMD1-205ENST00000519623 TRAPPC3LQ5T215 181 aa16.89■□□□□ 0.29
CSMD1-205ENST00000519623 RTCBQ9Y3I0 505 aaKnown RBP16.89■□□□□ 0.29
CSMD1-205ENST00000519623 MYH14Q7Z406 1995 aaKnown RBP16.88■□□□□ 0.29
CSMD1-205ENST00000519623 PTCD1O75127 700 aaKnown RBP16.88■□□□□ 0.29
CSMD1-205ENST00000519623 HMOX1P09601 288 aa16.88■□□□□ 0.29
CSMD1-205ENST00000519623 AKAP4Q5JQC9 854 aa16.88■□□□□ 0.29
CSMD1-205ENST00000519623 ARHGEF1Q92888 912 aaKnown RBP16.88■□□□□ 0.29
CSMD1-205ENST00000519623 LGR6Q9HBX8 967 aa16.88■□□□□ 0.29
CSMD1-205ENST00000519623 DIAPH1O60610 1272 aaKnown RBP16.87■□□□□ 0.29
CSMD1-205ENST00000519623 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
CSMD1-205ENST00000519623 CNTNAP4Q9C0A0 1308 aa16.87■□□□□ 0.29
CSMD1-205ENST00000519623 NPC1L1Q9UHC9 1359 aa16.87■□□□□ 0.29
CSMD1-205ENST00000519623 COL5A3P25940 1745 aaPredicted RBP16.87■□□□□ 0.29
CSMD1-205ENST00000519623 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
CSMD1-205ENST00000519623 ADRA2BP18089 450 aa16.86■□□□□ 0.29
CSMD1-205ENST00000519623 MMP10P09238 476 aa16.85■□□□□ 0.29
CSMD1-205ENST00000519623 NLGN1Q8N2Q7 840 aa16.85■□□□□ 0.29
CSMD1-205ENST00000519623 SLC52A2Q9HAB3 445 aa16.85■□□□□ 0.29
CSMD1-205ENST00000519623 RNMTO43148 476 aaKnown RBP16.84■□□□□ 0.29
CSMD1-205ENST00000519623 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
CSMD1-205ENST00000519623 GYS1P13807 737 aa16.83■□□□□ 0.28
CSMD1-205ENST00000519623 CRKLP46109 303 aaKnown RBP16.83■□□□□ 0.28
CSMD1-205ENST00000519623 RFC4P35249 363 aa16.82■□□□□ 0.28
CSMD1-205ENST00000519623 CNGB1Q14028 1251 aaPredicted RBP16.82■□□□□ 0.28
CSMD1-205ENST00000519623 COL3A1P02461 1466 aaPredicted RBP16.81■□□□□ 0.28
CSMD1-205ENST00000519623 INTS5Q6P9B9 1019 aaKnown RBP16.81■□□□□ 0.28
CSMD1-205ENST00000519623 TJP1Q07157 1748 aa16.8■□□□□ 0.28
CSMD1-205ENST00000519623 SLC39A6Q13433 755 aa16.8■□□□□ 0.28
CSMD1-205ENST00000519623 DNAJC10Q8IXB1 793 aa16.8■□□□□ 0.28
CSMD1-205ENST00000519623 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
CSMD1-205ENST00000519623 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
CSMD1-205ENST00000519623 CICQ96RK0 1608 aaPredicted RBP16.79■□□□□ 0.28
CSMD1-205ENST00000519623 KIF13BQ9NQT8 1826 aa16.79■□□□□ 0.28
CSMD1-205ENST00000519623 MRC1P22897 1456 aa16.79■□□□□ 0.28
CSMD1-205ENST00000519623 ADAMTS7Q9UKP4 1686 aa16.78■□□□□ 0.28
CSMD1-205ENST00000519623 C1QTNF8P60827 252 aa16.78■□□□□ 0.28
CSMD1-205ENST00000519623 TGFB2P61812 414 aa16.78■□□□□ 0.28
CSMD1-205ENST00000519623 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
CSMD1-205ENST00000519623 C4AP0C0L4 1744 aa16.77■□□□□ 0.28
CSMD1-205ENST00000519623 U2SURPO15042 1029 aaKnown RBP16.77■□□□□ 0.28
CSMD1-205ENST00000519623 CYP19A1P11511 503 aaPredicted RBP16.77■□□□□ 0.28
CSMD1-205ENST00000519623 KIAA1551Q9HCM1 1747 aa16.76■□□□□ 0.27
CSMD1-205ENST00000519623 USP42Q9H9J4 1324 aaKnown RBP16.76■□□□□ 0.27
CSMD1-205ENST00000519623 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
CSMD1-205ENST00000519623 A0A0G2JLW4 131 aa16.76■□□□□ 0.27
CSMD1-205ENST00000519623 FKBP8Q14318 412 aa16.76■□□□□ 0.27
CSMD1-205ENST00000519623 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
CSMD1-205ENST00000519623 CCDC87Q9NVE4 849 aa16.76■□□□□ 0.27
CSMD1-205ENST00000519623 PARP3Q9Y6F1 533 aa16.76■□□□□ 0.27
CSMD1-205ENST00000519623 N4BP2Q86UW6 1770 aaPredicted RBP16.75■□□□□ 0.27
CSMD1-205ENST00000519623 C10orf71Q711Q0 1435 aa16.75■□□□□ 0.27
CSMD1-205ENST00000519623 KCPQ6ZWJ8 1503 aa16.75■□□□□ 0.27
CSMD1-205ENST00000519623 SOS1Q07889 1333 aaPredicted RBP16.74■□□□□ 0.27
CSMD1-205ENST00000519623 DPEP1P16444 411 aa16.74■□□□□ 0.27
CSMD1-205ENST00000519623 KCNA3P22001 575 aa16.74■□□□□ 0.27
CSMD1-205ENST00000519623 TM4SF1P30408 202 aa16.74■□□□□ 0.27
CSMD1-205ENST00000519623 VSIG10Q8N0Z9 540 aa16.74■□□□□ 0.27
CSMD1-205ENST00000519623 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
CSMD1-205ENST00000519623 ATP10DQ9P241 1426 aa16.73■□□□□ 0.27
CSMD1-205ENST00000519623 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
CSMD1-205ENST00000519623 GIGYF1O75420 1035 aaPredicted RBP16.73■□□□□ 0.27
CSMD1-205ENST00000519623 DDR1Q08345 913 aa16.73■□□□□ 0.27
CSMD1-205ENST00000519623 GAS2L2Q8NHY3 880 aa16.73■□□□□ 0.27
CSMD1-205ENST00000519623 ADCY9O60503 1353 aa16.73■□□□□ 0.27
CSMD1-205ENST00000519623 PPP2R1AP30153 589 aa16.72■□□□□ 0.27
CSMD1-205ENST00000519623 ZPR1O75312 459 aa16.71■□□□□ 0.27
CSMD1-205ENST00000519623 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
CSMD1-205ENST00000519623 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
CSMD1-205ENST00000519623 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
CSMD1-205ENST00000519623 BCS1LQ9Y276 419 aa16.71■□□□□ 0.27
CSMD1-205ENST00000519623 ZBTB1Q9Y2K1 713 aa16.71■□□□□ 0.27
CSMD1-205ENST00000519623 UBR2Q8IWV8 1755 aa16.7■□□□□ 0.26
CSMD1-205ENST00000519623 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
CSMD1-205ENST00000519623 PRKAR2BP31323 418 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms