RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
PDGFRB-205ENST00000519575 EIF5BO60841 1220 aaKnown RBP12.73□□□□□ -0.37
PDGFRB-205ENST00000519575 SLC4A2P04920 1241 aa12.73□□□□□ -0.37
PDGFRB-205ENST00000519575 ANP32AP39687 249 aaKnown RBP12.73□□□□□ -0.37
PDGFRB-205ENST00000519575 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
PDGFRB-205ENST00000519575 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
PDGFRB-205ENST00000519575 HDAC5Q9UQL6 1122 aa12.73□□□□□ -0.37
PDGFRB-205ENST00000519575 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
PDGFRB-205ENST00000519575 HDGFL1Q5TGJ6 251 aa12.72□□□□□ -0.37
PDGFRB-205ENST00000519575 CARD10Q9BWT7 1032 aa12.72□□□□□ -0.37
PDGFRB-205ENST00000519575 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
PDGFRB-205ENST00000519575 PLCH1Q4KWH8 1693 aa12.72□□□□□ -0.37
PDGFRB-205ENST00000519575 MEGF6O75095 1541 aa12.72□□□□□ -0.37
PDGFRB-205ENST00000519575 RGS12O14924 1447 aa12.71□□□□□ -0.37
PDGFRB-205ENST00000519575 ZBTB7BO15156 539 aaPredicted RBP12.71□□□□□ -0.37
PDGFRB-205ENST00000519575 HMMRO75330 724 aa12.71□□□□□ -0.37
PDGFRB-205ENST00000519575 RPAP2Q8IXW5 612 aaPredicted RBP12.71□□□□□ -0.37
PDGFRB-205ENST00000519575 SMC5Q8IY18 1101 aa12.71□□□□□ -0.37
PDGFRB-205ENST00000519575 ZBTB47Q9UFB7 747 aaPredicted RBP12.71□□□□□ -0.37
PDGFRB-205ENST00000519575 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 IGHDP01880 384 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 GNAI3P08754 354 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 PHKG2P15735 406 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 PDE4AP27815 886 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 FLIIQ13045 1269 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 BACH2Q9BYV9 841 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 TNNQ9UQP3 1299 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 PHLPP1O60346 1717 aa12.7□□□□□ -0.38
PDGFRB-205ENST00000519575 LAMB4A4D0S4 1761 aa12.69□□□□□ -0.38
PDGFRB-205ENST00000519575 FKBP5Q13451 457 aaPredicted RBP12.69□□□□□ -0.38
PDGFRB-205ENST00000519575 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
PDGFRB-205ENST00000519575 SLC52A2Q9HAB3 445 aa12.69□□□□□ -0.38
PDGFRB-205ENST00000519575 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
PDGFRB-205ENST00000519575 IBTKQ9P2D0 1353 aaPredicted RBP12.69□□□□□ -0.38
PDGFRB-205ENST00000519575 HEG1Q9ULI3 1381 aa12.69□□□□□ -0.38
PDGFRB-205ENST00000519575 TOM1O60784 492 aa12.68□□□□□ -0.38
PDGFRB-205ENST00000519575 IL2RBP14784 551 aa12.68□□□□□ -0.38
PDGFRB-205ENST00000519575 EVA1CP58658 441 aa12.68□□□□□ -0.38
PDGFRB-205ENST00000519575 CHRNA2Q15822 529 aa12.68□□□□□ -0.38
PDGFRB-205ENST00000519575 TTC5Q8N0Z6 440 aa12.68□□□□□ -0.38
PDGFRB-205ENST00000519575 MIS18AQ9NYP9 233 aa12.68□□□□□ -0.38
PDGFRB-205ENST00000519575 DDX58O95786 925 aaKnown RBP12.67□□□□□ -0.38
PDGFRB-205ENST00000519575 RGS3P49796 1198 aa12.67□□□□□ -0.38
PDGFRB-205ENST00000519575 KRT24Q2M2I5 525 aa12.67□□□□□ -0.38
PDGFRB-205ENST00000519575 LGR6Q9HBX8 967 aa12.67□□□□□ -0.38
PDGFRB-205ENST00000519575 HYPKQ9NX55 129 aa12.67□□□□□ -0.38
PDGFRB-205ENST00000519575 KDM6AO15550 1401 aaPredicted RBP12.67□□□□□ -0.38
PDGFRB-205ENST00000519575 ATP10DQ9P241 1426 aa12.67□□□□□ -0.38
PDGFRB-205ENST00000519575 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 ZCRB1Q8TBF4 217 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 UPF2Q9HAU5 1272 aaKnown RBP12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 LRP6O75581 1613 aa12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
PDGFRB-205ENST00000519575 ERBB4Q15303 1308 aa12.65□□□□□ -0.38
PDGFRB-205ENST00000519575 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
PDGFRB-205ENST00000519575 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
PDGFRB-205ENST00000519575 PAPPAQ13219 1627 aa12.64□□□□□ -0.39
PDGFRB-205ENST00000519575 GIGYF1O75420 1035 aaPredicted RBP12.64□□□□□ -0.39
PDGFRB-205ENST00000519575 GNAI2P04899 355 aa12.64□□□□□ -0.39
PDGFRB-205ENST00000519575 NUCB1Q02818 461 aa12.64□□□□□ -0.39
PDGFRB-205ENST00000519575 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
PDGFRB-205ENST00000519575 ANKRD44Q8N8A2 993 aa12.64□□□□□ -0.39
PDGFRB-205ENST00000519575 FMNL2Q96PY5 1086 aa12.64□□□□□ -0.39
PDGFRB-205ENST00000519575 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
PDGFRB-205ENST00000519575 SHANK3Q9BYB0 1731 aa12.63□□□□□ -0.39
PDGFRB-205ENST00000519575 CABP4P57796 275 aa12.63□□□□□ -0.39
PDGFRB-205ENST00000519575 SLC4A10Q6U841 1118 aa12.63□□□□□ -0.39
PDGFRB-205ENST00000519575 SRCIN1Q9C0H9 1055 aa12.63□□□□□ -0.39
PDGFRB-205ENST00000519575 CYP27B1O15528 508 aa12.62□□□□□ -0.39
PDGFRB-205ENST00000519575 ALDH1L1O75891 902 aa12.62□□□□□ -0.39
PDGFRB-205ENST00000519575 SNRPA1P09661 255 aaKnown RBP12.62□□□□□ -0.39
PDGFRB-205ENST00000519575 CHD1LQ86WJ1 897 aa12.62□□□□□ -0.39
PDGFRB-205ENST00000519575 DDX21Q9NR30 783 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDGFRB-205ENST00000519575 C5P01031 1676 aa12.61□□□□□ -0.39
PDGFRB-205ENST00000519575 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
PDGFRB-205ENST00000519575 EIF2S2P20042 333 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-205ENST00000519575 DNAAF4Q8WXU2 420 aa12.61□□□□□ -0.39
PDGFRB-205ENST00000519575 CHPF2Q9P2E5 772 aa12.61□□□□□ -0.39
PDGFRB-205ENST00000519575 THRAP3Q9Y2W1 955 aaKnown RBP12.61□□□□□ -0.39
PDGFRB-205ENST00000519575 CEP85Q6P2H3 762 aa12.6□□□□□ -0.39
PDGFRB-205ENST00000519575 DCTPP1Q9H773 170 aa12.6□□□□□ -0.39
PDGFRB-205ENST00000519575 STRN4Q9NRL3 753 aa12.6□□□□□ -0.39
PDGFRB-205ENST00000519575 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
PDGFRB-205ENST00000519575 NEXNQ0ZGT2 675 aa12.59□□□□□ -0.39
PDGFRB-205ENST00000519575 C8orf34Q49A92 452 aa12.59□□□□□ -0.39
PDGFRB-205ENST00000519575 KSR2Q6VAB6 950 aa12.59□□□□□ -0.39
PDGFRB-205ENST00000519575 G2E3Q7L622 706 aa12.59□□□□□ -0.39
PDGFRB-205ENST00000519575 NFATC2IPQ8NCF5 419 aa12.59□□□□□ -0.39
PDGFRB-205ENST00000519575 BTG4Q9NY30 223 aa12.59□□□□□ -0.39
PDGFRB-205ENST00000519575 DISP2A7MBM2 1401 aa12.58□□□□□ -0.4
PDGFRB-205ENST00000519575 HSP90AB4PQ58FF6 505 aa12.58□□□□□ -0.4
PDGFRB-205ENST00000519575 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
PDGFRB-205ENST00000519575 TNS2Q63HR2 1409 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms