RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 ESCO1Q5FWF5 840 aa11.83□□□□□ -0.52
PTPN12-213ENST00000519553 CNKSR1Q969H4 720 aa11.83□□□□□ -0.52
PTPN12-213ENST00000519553 INSM2Q96T92 566 aaPredicted RBP11.83□□□□□ -0.52
PTPN12-213ENST00000519553 ESYT1Q9BSJ8 1104 aa11.83□□□□□ -0.52
PTPN12-213ENST00000519553 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
PTPN12-213ENST00000519553 MEN1O00255 615 aa11.81□□□□□ -0.52
PTPN12-213ENST00000519553 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
PTPN12-213ENST00000519553 SEC13P55735 322 aa11.81□□□□□ -0.52
PTPN12-213ENST00000519553 TMEM164Q5U3C3 297 aa11.81□□□□□ -0.52
PTPN12-213ENST00000519553 FOXD4L5Q5VV16 416 aaPredicted RBP11.81□□□□□ -0.52
PTPN12-213ENST00000519553 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
PTPN12-213ENST00000519553 M0R2N6 131 aa11.8□□□□□ -0.52
PTPN12-213ENST00000519553 EPHA4P54764 986 aa11.8□□□□□ -0.52
PTPN12-213ENST00000519553 FAM69CQ0P6D2 419 aa11.8□□□□□ -0.52
PTPN12-213ENST00000519553 SCARF1Q14162 830 aa11.8□□□□□ -0.52
PTPN12-213ENST00000519553 RETREG2Q8NC44 543 aa11.8□□□□□ -0.52
PTPN12-213ENST00000519553 FAM200AQ8TCP9 573 aa11.8□□□□□ -0.52
PTPN12-213ENST00000519553 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
PTPN12-213ENST00000519553 SERTAD1Q9UHV2 236 aa11.8□□□□□ -0.52
PTPN12-213ENST00000519553 TMEM88BA6NKF7 163 aa11.79□□□□□ -0.52
PTPN12-213ENST00000519553 TSEN2Q8NCE0 465 aaKnown RBP11.79□□□□□ -0.52
PTPN12-213ENST00000519553 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
PTPN12-213ENST00000519553 RNF144AP50876 292 aaPredicted RBP11.78□□□□□ -0.52
PTPN12-213ENST00000519553 POLMQ9NP87 494 aaPredicted RBP11.78□□□□□ -0.52
PTPN12-213ENST00000519553 SOS2Q07890 1332 aaPredicted RBP11.78□□□□□ -0.52
PTPN12-213ENST00000519553 BACH1O14867 736 aa11.77□□□□□ -0.53
PTPN12-213ENST00000519553 GPC1P35052 558 aa11.77□□□□□ -0.53
PTPN12-213ENST00000519553 CENPCQ03188 943 aa11.77□□□□□ -0.53
PTPN12-213ENST00000519553 MTFR1Q15390 333 aa11.77□□□□□ -0.53
PTPN12-213ENST00000519553 TLR1Q15399 786 aa11.77□□□□□ -0.53
PTPN12-213ENST00000519553 RNF217Q8TC41 542 aa11.77□□□□□ -0.53
PTPN12-213ENST00000519553 NLRP3Q96P20 1036 aa11.77□□□□□ -0.53
PTPN12-213ENST00000519553 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.53
PTPN12-213ENST00000519553 SMTNP53814 917 aa11.76□□□□□ -0.53
PTPN12-213ENST00000519553 CARNS1A5YM72 827 aa11.75□□□□□ -0.53
PTPN12-213ENST00000519553 A6NJY4 79 aa11.75□□□□□ -0.53
PTPN12-213ENST00000519553 TTLL8A6PVC2 850 aa11.75□□□□□ -0.53
PTPN12-213ENST00000519553 CSB-PGBD3P0DP91 1061 aa11.75□□□□□ -0.53
PTPN12-213ENST00000519553 TNS4Q8IZW8 715 aa11.75□□□□□ -0.53
PTPN12-213ENST00000519553 GRIP2Q9C0E4 1043 aa11.75□□□□□ -0.53
PTPN12-213ENST00000519553 USP3Q9Y6I4 520 aa11.75□□□□□ -0.53
PTPN12-213ENST00000519553 FOXK2Q01167 660 aa11.74□□□□□ -0.53
PTPN12-213ENST00000519553 SWI5Q1ZZU3 235 aa11.74□□□□□ -0.53
PTPN12-213ENST00000519553 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
PTPN12-213ENST00000519553 GMPR2Q9P2T1 348 aaKnown RBP11.74□□□□□ -0.53
PTPN12-213ENST00000519553 IQSEC3Q9UPP2 1182 aaPredicted RBP11.74□□□□□ -0.53
PTPN12-213ENST00000519553 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
PTPN12-213ENST00000519553 ZNF295-AS1Q8N0V1 137 aa11.73□□□□□ -0.53
PTPN12-213ENST00000519553 SCHIP1Q9P0W5 487 aaPredicted RBP11.73□□□□□ -0.53
PTPN12-213ENST00000519553 DNMT3LQ9UJW3 386 aa11.73□□□□□ -0.53
PTPN12-213ENST00000519553 LGR5O75473 907 aa11.72□□□□□ -0.53
PTPN12-213ENST00000519553 TRIM47Q96LD4 638 aa11.72□□□□□ -0.53
PTPN12-213ENST00000519553 PPARGC1BQ86YN6 1023 aaKnown RBP11.71□□□□□ -0.53
PTPN12-213ENST00000519553 CLP1Q92989 425 aaKnown RBP11.71□□□□□ -0.53
PTPN12-213ENST00000519553 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.53
PTPN12-213ENST00000519553 TSPAN10Q9H1Z9 355 aaPredicted RBP11.71□□□□□ -0.53
PTPN12-213ENST00000519553 SLC27A3Q5K4L6 730 aa11.7□□□□□ -0.54
PTPN12-213ENST00000519553 FIGNL2A6NMB9 653 aa11.69□□□□□ -0.54
PTPN12-213ENST00000519553 CDK2AP1O14519 115 aa11.69□□□□□ -0.54
PTPN12-213ENST00000519553 C21orf2O43822 256 aa11.69□□□□□ -0.54
PTPN12-213ENST00000519553 SLC9A9Q8IVB4 645 aa11.69□□□□□ -0.54
PTPN12-213ENST00000519553 HINFPQ9BQA5 517 aa11.69□□□□□ -0.54
PTPN12-213ENST00000519553 SENP2Q9HC62 589 aa11.69□□□□□ -0.54
PTPN12-213ENST00000519553 SOBPA7XYQ1 873 aa11.68□□□□□ -0.54
PTPN12-213ENST00000519553 POTECB2RU33 542 aa11.68□□□□□ -0.54
PTPN12-213ENST00000519553 SPATA31C2B4DYI2 1134 aa11.68□□□□□ -0.54
PTPN12-213ENST00000519553 WEE1P30291 646 aa11.68□□□□□ -0.54
PTPN12-213ENST00000519553 OCLNQ16625 522 aa11.68□□□□□ -0.54
PTPN12-213ENST00000519553 TBCELQ5QJ74 424 aa11.68□□□□□ -0.54
PTPN12-213ENST00000519553 KIFC2Q96AC6 838 aa11.68□□□□□ -0.54
PTPN12-213ENST00000519553 LYSMD3Q7Z3D4 306 aa11.67□□□□□ -0.54
PTPN12-213ENST00000519553 PRICKLE2Q7Z3G6 844 aa11.67□□□□□ -0.54
PTPN12-213ENST00000519553 RHBDD1Q8TEB9 315 aa11.67□□□□□ -0.54
PTPN12-213ENST00000519553 SNRPBP14678 240 aaKnown RBP11.66□□□□□ -0.54
PTPN12-213ENST00000519553 TMEM214Q6NUQ4 689 aaKnown RBP11.66□□□□□ -0.54
PTPN12-213ENST00000519553 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
PTPN12-213ENST00000519553 MAN1A2O60476 641 aa11.65□□□□□ -0.54
PTPN12-213ENST00000519553 PRMT3O60678 531 aa11.65□□□□□ -0.54
PTPN12-213ENST00000519553 C4orf17Q53FE4 359 aa11.65□□□□□ -0.54
PTPN12-213ENST00000519553 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
PTPN12-213ENST00000519553 ZDHHC1Q8WTX9 485 aa11.65□□□□□ -0.54
PTPN12-213ENST00000519553 IGFBP4P22692 258 aa11.64□□□□□ -0.55
PTPN12-213ENST00000519553 POU4F2Q12837 409 aa11.64□□□□□ -0.55
PTPN12-213ENST00000519553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.64□□□□□ -0.55
PTPN12-213ENST00000519553 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
PTPN12-213ENST00000519553 POTEAQ6S8J7 498 aa11.64□□□□□ -0.55
PTPN12-213ENST00000519553 SCG3Q8WXD2 468 aaKnown RBP11.64□□□□□ -0.55
PTPN12-213ENST00000519553 PRIMPOLQ96LW4 560 aa11.64□□□□□ -0.55
PTPN12-213ENST00000519553 RHOQP17081 205 aa11.63□□□□□ -0.55
PTPN12-213ENST00000519553 PSMA6P60900 246 aaKnown RBP11.63□□□□□ -0.55
PTPN12-213ENST00000519553 GNASQ5JWF2 1037 aa11.63□□□□□ -0.55
PTPN12-213ENST00000519553 TAS1R3Q7RTX0 852 aa11.63□□□□□ -0.55
PTPN12-213ENST00000519553 CXXC1Q9P0U4 656 aaPredicted RBP11.63□□□□□ -0.55
PTPN12-213ENST00000519553 ATAD2Q6PL18 1390 aa11.63□□□□□ -0.55
PTPN12-213ENST00000519553 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
PTPN12-213ENST00000519553 ATP2B4P23634 1241 aa11.62□□□□□ -0.55
PTPN12-213ENST00000519553 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
PTPN12-213ENST00000519553 SENP3-EIF4A1A0A087X0R7 540 aa11.61□□□□□ -0.55
PTPN12-213ENST00000519553 GTF2E1P29083 439 aaPredicted RBP11.61□□□□□ -0.55
PTPN12-213ENST00000519553 FKBP5Q13451 457 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms