RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 PER1O15534 1290 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC9-206ENST00000519482 IL13P35225 146 aa16.91■□□□□ 0.3
TRAPPC9-206ENST00000519482 ATP6V1AP38606 617 aa16.91■□□□□ 0.3
TRAPPC9-206ENST00000519482 GPR162Q16538 588 aa16.91■□□□□ 0.3
TRAPPC9-206ENST00000519482 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
TRAPPC9-206ENST00000519482 AEBP1Q8IUX7 1158 aa16.91■□□□□ 0.3
TRAPPC9-206ENST00000519482 LINC00116Q8NCU8 138 aa16.91■□□□□ 0.3
TRAPPC9-206ENST00000519482 KDM6AO15550 1401 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC9-206ENST00000519482 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
TRAPPC9-206ENST00000519482 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
TRAPPC9-206ENST00000519482 SULT6B1Q6IMI4 303 aa16.9■□□□□ 0.3
TRAPPC9-206ENST00000519482 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
TRAPPC9-206ENST00000519482 ITPK1Q13572 414 aa16.89■□□□□ 0.29
TRAPPC9-206ENST00000519482 NLGN2Q8NFZ4 835 aa16.89■□□□□ 0.29
TRAPPC9-206ENST00000519482 PHF14O94880 888 aa16.88■□□□□ 0.29
TRAPPC9-206ENST00000519482 MTHFSP49914 203 aa16.88■□□□□ 0.29
TRAPPC9-206ENST00000519482 CABP4P57796 275 aa16.88■□□□□ 0.29
TRAPPC9-206ENST00000519482 AMIGO3Q86WK7 504 aa16.88■□□□□ 0.29
TRAPPC9-206ENST00000519482 CD2APQ9Y5K6 639 aa16.88■□□□□ 0.29
TRAPPC9-206ENST00000519482 NPC1L1Q9UHC9 1359 aa16.87■□□□□ 0.29
TRAPPC9-206ENST00000519482 CICQ96RK0 1608 aaPredicted RBP16.86■□□□□ 0.29
TRAPPC9-206ENST00000519482 GNPATO15228 680 aa16.86■□□□□ 0.29
TRAPPC9-206ENST00000519482 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
TRAPPC9-206ENST00000519482 RC3H1Q5TC82 1133 aaKnown RBP16.85■□□□□ 0.29
TRAPPC9-206ENST00000519482 PELP1Q8IZL8 1130 aaKnown RBP16.85■□□□□ 0.29
TRAPPC9-206ENST00000519482 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC9-206ENST00000519482 SLC4A9Q96Q91 983 aa16.85■□□□□ 0.29
TRAPPC9-206ENST00000519482 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-206ENST00000519482 GRIN3BO60391 1043 aa16.84■□□□□ 0.29
TRAPPC9-206ENST00000519482 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
TRAPPC9-206ENST00000519482 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-206ENST00000519482 DIEXFQ68CQ4 756 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-206ENST00000519482 SMIM5Q71RC9 77 aa16.84■□□□□ 0.29
TRAPPC9-206ENST00000519482 NFATC2IPQ8NCF5 419 aa16.84■□□□□ 0.29
TRAPPC9-206ENST00000519482 CNTNAP4Q9C0A0 1308 aa16.83■□□□□ 0.28
TRAPPC9-206ENST00000519482 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
TRAPPC9-206ENST00000519482 TJP1Q07157 1748 aa16.82■□□□□ 0.28
TRAPPC9-206ENST00000519482 DIAPH1O60610 1272 aaKnown RBP16.82■□□□□ 0.28
TRAPPC9-206ENST00000519482 ADRA2BP18089 450 aa16.82■□□□□ 0.28
TRAPPC9-206ENST00000519482 TRAPPC3LQ5T215 181 aa16.82■□□□□ 0.28
TRAPPC9-206ENST00000519482 GOLGB1Q14789 3259 aaKnown RBP16.82■□□□□ 0.28
TRAPPC9-206ENST00000519482 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
TRAPPC9-206ENST00000519482 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
TRAPPC9-206ENST00000519482 YBX3P16989 372 aaKnown RBP eCLIP16.81■□□□□ 0.285e-6■■■□□ 19.1
TRAPPC9-206ENST00000519482 C4AP0C0L4 1744 aa16.81■□□□□ 0.28
TRAPPC9-206ENST00000519482 MRC1P22897 1456 aa16.8■□□□□ 0.28
TRAPPC9-206ENST00000519482 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
TRAPPC9-206ENST00000519482 HMOX1P09601 288 aa16.8■□□□□ 0.28
TRAPPC9-206ENST00000519482 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC9-206ENST00000519482 PTCD1O75127 700 aaKnown RBP16.79■□□□□ 0.28
TRAPPC9-206ENST00000519482 NLGN1Q8N2Q7 840 aa16.79■□□□□ 0.28
TRAPPC9-206ENST00000519482 SLC52A2Q9HAB3 445 aa16.79■□□□□ 0.28
TRAPPC9-206ENST00000519482 ARHGEF1Q92888 912 aaKnown RBP16.78■□□□□ 0.28
TRAPPC9-206ENST00000519482 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-206ENST00000519482 RFC4P35249 363 aa16.77■□□□□ 0.28
TRAPPC9-206ENST00000519482 MTHFSDQ2M296 383 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-206ENST00000519482 LGR6Q9HBX8 967 aa16.77■□□□□ 0.28
TRAPPC9-206ENST00000519482 MMP10P09238 476 aa16.76■□□□□ 0.27
TRAPPC9-206ENST00000519482 KIAA1551Q9HCM1 1747 aa16.76■□□□□ 0.27
TRAPPC9-206ENST00000519482 UBR2Q8IWV8 1755 aa16.75■□□□□ 0.27
TRAPPC9-206ENST00000519482 GYS1P13807 737 aa16.75■□□□□ 0.27
TRAPPC9-206ENST00000519482 CRKLP46109 303 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-206ENST00000519482 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC9-206ENST00000519482 U2SURPO15042 1029 aaKnown RBP16.73■□□□□ 0.27
TRAPPC9-206ENST00000519482 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-206ENST00000519482 KCPQ6ZWJ8 1503 aa16.73■□□□□ 0.27
TRAPPC9-206ENST00000519482 SIPA1L3O60292 1781 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-206ENST00000519482 TGFB2P61812 414 aa16.72■□□□□ 0.27
TRAPPC9-206ENST00000519482 BRCA1P38398 1863 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 C10orf71Q711Q0 1435 aa16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 INTS5Q6P9B9 1019 aaKnown RBP16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 DNAJC10Q8IXB1 793 aa16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 GAS2L2Q8NHY3 880 aa16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 CFAP53Q96M91 514 aa16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 CCDC87Q9NVE4 849 aa16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 PARP3Q9Y6F1 533 aa16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 PXDNLA1KZ92 1463 aa16.71■□□□□ 0.27
TRAPPC9-206ENST00000519482 USP42Q9H9J4 1324 aaKnown RBP16.7■□□□□ 0.26
TRAPPC9-206ENST00000519482 SLC39A6Q13433 755 aa16.7■□□□□ 0.26
TRAPPC9-206ENST00000519482 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
TRAPPC9-206ENST00000519482 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
TRAPPC9-206ENST00000519482 CYP19A1P11511 503 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-206ENST00000519482 SRP68Q9UHB9 627 aaKnown RBP16.68■□□□□ 0.26
TRAPPC9-206ENST00000519482 NUDCQ9Y266 331 aa16.68■□□□□ 0.26
TRAPPC9-206ENST00000519482 SOS1Q07889 1333 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-206ENST00000519482 GIGYF1O75420 1035 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-206ENST00000519482 C1QTNF8P60827 252 aa16.67■□□□□ 0.26
TRAPPC9-206ENST00000519482 TEFQ10587 303 aa16.67■□□□□ 0.26
TRAPPC9-206ENST00000519482 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
TRAPPC9-206ENST00000519482 ARFGEF1Q9Y6D6 1849 aa16.67■□□□□ 0.26
TRAPPC9-206ENST00000519482 ADCY9O60503 1353 aa16.66■□□□□ 0.26
TRAPPC9-206ENST00000519482 ZPR1O75312 459 aa16.66■□□□□ 0.26
TRAPPC9-206ENST00000519482 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
TRAPPC9-206ENST00000519482 FKBP8Q14318 412 aa16.66■□□□□ 0.26
TRAPPC9-206ENST00000519482 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
TRAPPC9-206ENST00000519482 ATP10DQ9P241 1426 aa16.66■□□□□ 0.26
TRAPPC9-206ENST00000519482 WWC3Q9ULE0 1092 aa16.66■□□□□ 0.26
TRAPPC9-206ENST00000519482 AFDNP55196 1824 aaKnown RBP16.66■□□□□ 0.26
TRAPPC9-206ENST00000519482 A0A0G2JLW4 131 aa16.65■□□□□ 0.26
TRAPPC9-206ENST00000519482 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms