RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 ASAP1Q9ULH1 1129 aa21.72■■□□□ 1.07
VPS37A-204ENST00000519381 IGSF1Q8N6C5 1336 aa21.72■■□□□ 1.07
VPS37A-204ENST00000519381 C1QTNF8P60827 252 aa21.71■■□□□ 1.07
VPS37A-204ENST00000519381 RBM42Q9BTD8 480 aaKnown RBP21.7■■□□□ 1.06
VPS37A-204ENST00000519381 C1orf141Q5JVX7 400 aa21.69■■□□□ 1.06
VPS37A-204ENST00000519381 ZNF530Q6P9A1 599 aaPredicted RBP21.69■■□□□ 1.06
VPS37A-204ENST00000519381 KNSTRNQ9Y448 316 aa21.69■■□□□ 1.06
VPS37A-204ENST00000519381 ERVV-2B6SEH9 535 aa21.68■■□□□ 1.06
VPS37A-204ENST00000519381 DCAF5Q96JK2 942 aa21.68■■□□□ 1.06
VPS37A-204ENST00000519381 CABP4P57796 275 aa21.67■■□□□ 1.06
VPS37A-204ENST00000519381 AMOTQ4VCS5 1084 aa21.67■■□□□ 1.06
VPS37A-204ENST00000519381 SMIM5Q71RC9 77 aa21.67■■□□□ 1.06
VPS37A-204ENST00000519381 ATG3Q9NT62 314 aa21.67■■□□□ 1.06
VPS37A-204ENST00000519381 ITPK1Q13572 414 aa21.66■■□□□ 1.06
VPS37A-204ENST00000519381 AMIGO3Q86WK7 504 aa21.66■■□□□ 1.06
VPS37A-204ENST00000519381 RTCBQ9Y3I0 505 aaKnown RBP21.66■■□□□ 1.06
VPS37A-204ENST00000519381 WWC3Q9ULE0 1092 aa21.64■■□□□ 1.05
VPS37A-204ENST00000519381 MTHFSP49914 203 aa21.63■■□□□ 1.05
VPS37A-204ENST00000519381 TRAPPC3LQ5T215 181 aa21.63■■□□□ 1.05
VPS37A-204ENST00000519381 KDRP35968 1356 aa21.61■■□□□ 1.05
VPS37A-204ENST00000519381 MMP10P09238 476 aa21.61■■□□□ 1.05
VPS37A-204ENST00000519381 SULT6B1Q6IMI4 303 aa21.61■■□□□ 1.05
VPS37A-204ENST00000519381 ATP10DQ9P241 1426 aa21.61■■□□□ 1.05
VPS37A-204ENST00000519381 RFC4P35249 363 aa21.6■■□□□ 1.05
VPS37A-204ENST00000519381 AEBP1Q8IUX7 1158 aa21.6■■□□□ 1.05
VPS37A-204ENST00000519381 GPBP1L1Q9HC44 474 aaPredicted RBP21.6■■□□□ 1.05
VPS37A-204ENST00000519381 KDM6AO15550 1401 aaPredicted RBP21.6■■□□□ 1.05
VPS37A-204ENST00000519381 ADRA2BP18089 450 aa21.59■■□□□ 1.05
VPS37A-204ENST00000519381 NLGN1Q8N2Q7 840 aa21.59■■□□□ 1.05
VPS37A-204ENST00000519381 ZNF831Q5JPB2 1677 aa21.59■■□□□ 1.05
VPS37A-204ENST00000519381 CNTNAP4Q9C0A0 1308 aa21.58■■□□□ 1.05
VPS37A-204ENST00000519381 PTCD1O75127 700 aaKnown RBP21.58■■□□□ 1.05
VPS37A-204ENST00000519381 RC3H1Q5TC82 1133 aaKnown RBP21.57■■□□□ 1.04
VPS37A-204ENST00000519381 ZNF526Q8TF50 670 aaPredicted RBP21.57■■□□□ 1.04
VPS37A-204ENST00000519381 CCDC87Q9NVE4 849 aa21.57■■□□□ 1.04
VPS37A-204ENST00000519381 CICQ96RK0 1608 aaPredicted RBP21.57■■□□□ 1.04
VPS37A-204ENST00000519381 COL5A3P25940 1745 aaPredicted RBP21.57■■□□□ 1.04
VPS37A-204ENST00000519381 PARP3Q9Y6F1 533 aa21.56■■□□□ 1.04
VPS37A-204ENST00000519381 RPS6KA4O75676 772 aa21.54■■□□□ 1.04
VPS37A-204ENST00000519381 NFATC2IPQ8NCF5 419 aa21.54■■□□□ 1.04
VPS37A-204ENST00000519381 ARHGEF1Q92888 912 aaKnown RBP21.54■■□□□ 1.04
VPS37A-204ENST00000519381 SLC4A9Q96Q91 983 aa21.53■■□□□ 1.04
VPS37A-204ENST00000519381 IL13P35225 146 aa21.52■■□□□ 1.04
VPS37A-204ENST00000519381 TGFB2P61812 414 aa21.52■■□□□ 1.04
VPS37A-204ENST00000519381 AKAP4Q5JQC9 854 aa21.52■■□□□ 1.04
VPS37A-204ENST00000519381 BCS1LQ9Y276 419 aa21.52■■□□□ 1.04
VPS37A-204ENST00000519381 CRKLP46109 303 aaKnown RBP21.51■■□□□ 1.03
VPS37A-204ENST00000519381 C4AP0C0L4 1744 aa21.51■■□□□ 1.03
VPS37A-204ENST00000519381 KIF7Q2M1P5 1343 aa21.51■■□□□ 1.03
VPS37A-204ENST00000519381 PXDNLA1KZ92 1463 aa21.51■■□□□ 1.03
VPS37A-204ENST00000519381 C10orf71Q711Q0 1435 aa21.5■■□□□ 1.03
VPS37A-204ENST00000519381 GYS1P13807 737 aa21.5■■□□□ 1.03
VPS37A-204ENST00000519381 SCN11AQ9UI33 1791 aa21.5■■□□□ 1.03
VPS37A-204ENST00000519381 KIF13BQ9NQT8 1826 aa21.5■■□□□ 1.03
VPS37A-204ENST00000519381 ADCY9O60503 1353 aa21.49■■□□□ 1.03
VPS37A-204ENST00000519381 N4BP2Q86UW6 1770 aaPredicted RBP21.49■■□□□ 1.03
VPS37A-204ENST00000519381 AMER1Q5JTC6 1135 aaPredicted RBP21.49■■□□□ 1.03
VPS37A-204ENST00000519381 HMOX1P09601 288 aa21.48■■□□□ 1.03
VPS37A-204ENST00000519381 A0A0G2JLW4 131 aa21.47■■□□□ 1.03
VPS37A-204ENST00000519381 FCHSD2O94868 740 aa21.47■■□□□ 1.03
VPS37A-204ENST00000519381 CC2D1BQ5T0F9 858 aaKnown RBP21.47■■□□□ 1.03
VPS37A-204ENST00000519381 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
VPS37A-204ENST00000519381 CNGB1Q14028 1251 aaPredicted RBP21.46■■□□□ 1.03
VPS37A-204ENST00000519381 SLC52A2Q9HAB3 445 aa21.46■■□□□ 1.03
VPS37A-204ENST00000519381 MYH14Q7Z406 1995 aaKnown RBP21.46■■□□□ 1.03
VPS37A-204ENST00000519381 TJP1Q07157 1748 aa21.46■■□□□ 1.03
VPS37A-204ENST00000519381 ZPR1O75312 459 aa21.45■■□□□ 1.02
VPS37A-204ENST00000519381 ARHGAP27Q6ZUM4 889 aa21.45■■□□□ 1.02
VPS37A-204ENST00000519381 SRP68Q9UHB9 627 aaKnown RBP21.45■■□□□ 1.02
VPS37A-204ENST00000519381 USP42Q9H9J4 1324 aaKnown RBP21.45■■□□□ 1.02
VPS37A-204ENST00000519381 DPEP1P16444 411 aa21.44■■□□□ 1.02
VPS37A-204ENST00000519381 RNMTO43148 476 aaKnown RBP21.42■■□□□ 1.02
VPS37A-204ENST00000519381 DNAJC10Q8IXB1 793 aa21.42■■□□□ 1.02
VPS37A-204ENST00000519381 KIAA1551Q9HCM1 1747 aa21.42■■□□□ 1.02
VPS37A-204ENST00000519381 VIRMAQ69YN4 1812 aaKnown RBP21.41■■□□□ 1.02
VPS37A-204ENST00000519381 MRC1P22897 1456 aa21.41■■□□□ 1.02
VPS37A-204ENST00000519381 FKBP8Q14318 412 aa21.41■■□□□ 1.02
VPS37A-204ENST00000519381 TTC5Q8N0Z6 440 aa21.41■■□□□ 1.02
VPS37A-204ENST00000519381 LGR6Q9HBX8 967 aa21.41■■□□□ 1.02
VPS37A-204ENST00000519381 U2SURPO15042 1029 aaKnown RBP21.4■■□□□ 1.02
VPS37A-204ENST00000519381 SLC39A6Q13433 755 aa21.4■■□□□ 1.02
VPS37A-204ENST00000519381 PIM2Q9P1W9 311 aa21.4■■□□□ 1.02
VPS37A-204ENST00000519381 MTHFSDQ2M296 383 aaKnown RBP21.38■■□□□ 1.01
VPS37A-204ENST00000519381 DALRD3Q5D0E6 543 aaKnown RBP21.38■■□□□ 1.01
VPS37A-204ENST00000519381 USPL1Q5W0Q7 1092 aa21.38■■□□□ 1.01
VPS37A-204ENST00000519381 INTS5Q6P9B9 1019 aaKnown RBP21.38■■□□□ 1.01
VPS37A-204ENST00000519381 COL15A1P39059 1388 aa21.37■■□□□ 1.01
VPS37A-204ENST00000519381 SOS1Q07889 1333 aaPredicted RBP21.37■■□□□ 1.01
VPS37A-204ENST00000519381 HSPA6P17066 643 aa21.37■■□□□ 1.01
VPS37A-204ENST00000519381 CYP19A1P11511 503 aaPredicted RBP21.36■■□□□ 1.01
VPS37A-204ENST00000519381 DDR1Q08345 913 aa21.36■■□□□ 1.01
VPS37A-204ENST00000519381 TEFQ10587 303 aa21.36■■□□□ 1.01
VPS37A-204ENST00000519381 BRCA1P38398 1863 aaKnown RBP21.36■■□□□ 1.01
VPS37A-204ENST00000519381 ARFGEF1Q9Y6D6 1849 aa21.35■■□□□ 1.01
VPS37A-204ENST00000519381 GAS2L2Q8NHY3 880 aa21.35■■□□□ 1.01
VPS37A-204ENST00000519381 KCPQ6ZWJ8 1503 aa21.34■■□□□ 1.01
VPS37A-204ENST00000519381 POLRMTO00411 1230 aaKnown RBP21.34■■□□□ 1.01
VPS37A-204ENST00000519381 PER1O15534 1290 aaPredicted RBP21.34■■□□□ 1.01
VPS37A-204ENST00000519381 STARD3NLO95772 234 aa21.34■■□□□ 1.01
VPS37A-204ENST00000519381 NPM2Q86SE8 214 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms