RNA–Protein interactions for RNA: ENST00000519138.1

MCM4-206, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-206ENST00000519138 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
MCM4-206ENST00000519138 MYH14Q7Z406 1995 aaKnown RBP17.03■□□□□ 0.32
MCM4-206ENST00000519138 YY1P25490 414 aa17.03■□□□□ 0.32
MCM4-206ENST00000519138 POLD1P28340 1107 aa17.03■□□□□ 0.32
MCM4-206ENST00000519138 ATP6V1AP38606 617 aa17.03■□□□□ 0.32
MCM4-206ENST00000519138 RBM42Q9BTD8 480 aaKnown RBP17.03■□□□□ 0.32
MCM4-206ENST00000519138 KDRP35968 1356 aa17.02■□□□□ 0.32
MCM4-206ENST00000519138 COL5A3P25940 1745 aaPredicted RBP17.02■□□□□ 0.32
MCM4-206ENST00000519138 COL3A1P02461 1466 aaPredicted RBP17.02■□□□□ 0.32
MCM4-206ENST00000519138 CABP4P57796 275 aa17.02■□□□□ 0.32
MCM4-206ENST00000519138 C1orf141Q5JVX7 400 aa17.02■□□□□ 0.32
MCM4-206ENST00000519138 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
MCM4-206ENST00000519138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
MCM4-206ENST00000519138 AMOTQ4VCS5 1084 aa17.01■□□□□ 0.31
MCM4-206ENST00000519138 CHD4Q14839 1912 aa17■□□□□ 0.31
MCM4-206ENST00000519138 GOLGB1Q14789 3259 aaKnown RBP17■□□□□ 0.31
MCM4-206ENST00000519138 DCAF8L1A6NGE4 600 aa17■□□□□ 0.31
MCM4-206ENST00000519138 ERVV-2B6SEH9 535 aa17■□□□□ 0.31
MCM4-206ENST00000519138 GNPATO15228 680 aa17■□□□□ 0.31
MCM4-206ENST00000519138 DIAPH1O60610 1272 aaKnown RBP17■□□□□ 0.31
MCM4-206ENST00000519138 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
MCM4-206ENST00000519138 NFATC2IPQ8NCF5 419 aa17■□□□□ 0.31
MCM4-206ENST00000519138 LGR6Q9HBX8 967 aa17■□□□□ 0.31
MCM4-206ENST00000519138 TJP1Q07157 1748 aa16.99■□□□□ 0.31
MCM4-206ENST00000519138 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
MCM4-206ENST00000519138 HSP90AB1P08238 724 aaKnown RBP16.99■□□□□ 0.31
MCM4-206ENST00000519138 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
MCM4-206ENST00000519138 MTHFSDQ2M296 383 aaKnown RBP16.97■□□□□ 0.31
MCM4-206ENST00000519138 WWC3Q9ULE0 1092 aa16.97■□□□□ 0.31
MCM4-206ENST00000519138 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
MCM4-206ENST00000519138 C4AP0C0L4 1744 aa16.96■□□□□ 0.31
MCM4-206ENST00000519138 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.31
MCM4-206ENST00000519138 NPC1L1Q9UHC9 1359 aa16.96■□□□□ 0.31
MCM4-206ENST00000519138 ZNF831Q5JPB2 1677 aa16.95■□□□□ 0.3
MCM4-206ENST00000519138 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
MCM4-206ENST00000519138 GPR162Q16538 588 aa16.95■□□□□ 0.3
MCM4-206ENST00000519138 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
MCM4-206ENST00000519138 RNMTO43148 476 aaKnown RBP16.94■□□□□ 0.3
MCM4-206ENST00000519138 FLAD1Q8NFF5 587 aa16.94■□□□□ 0.3
MCM4-206ENST00000519138 SSFA2P28290 1259 aa16.93■□□□□ 0.3
MCM4-206ENST00000519138 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
MCM4-206ENST00000519138 YBX3P16989 372 aaKnown RBP eCLIP16.92■□□□□ 0.32e-12■■■□□ 17.4
MCM4-206ENST00000519138 PPP2R1AP30153 589 aa16.91■□□□□ 0.3
MCM4-206ENST00000519138 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
MCM4-206ENST00000519138 N4BP2Q86UW6 1770 aaPredicted RBP16.91■□□□□ 0.3
MCM4-206ENST00000519138 MRC1P22897 1456 aa16.91■□□□□ 0.3
MCM4-206ENST00000519138 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
MCM4-206ENST00000519138 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
MCM4-206ENST00000519138 RTCBQ9Y3I0 505 aaKnown RBP16.9■□□□□ 0.3
MCM4-206ENST00000519138 SIPA1L3O60292 1781 aaPredicted RBP16.89■□□□□ 0.3
MCM4-206ENST00000519138 CRKLP46109 303 aaKnown RBP16.89■□□□□ 0.29
MCM4-206ENST00000519138 TRAPPC3LQ5T215 181 aa16.89■□□□□ 0.29
MCM4-206ENST00000519138 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
MCM4-206ENST00000519138 SRP68Q9UHB9 627 aaKnown RBP16.89■□□□□ 0.29
MCM4-206ENST00000519138 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
MCM4-206ENST00000519138 CNTNAP4Q9C0A0 1308 aa16.89■□□□□ 0.29
MCM4-206ENST00000519138 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
MCM4-206ENST00000519138 UBR2Q8IWV8 1755 aa16.88■□□□□ 0.29
MCM4-206ENST00000519138 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
MCM4-206ENST00000519138 MMP10P09238 476 aa16.87■□□□□ 0.29
MCM4-206ENST00000519138 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
MCM4-206ENST00000519138 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
MCM4-206ENST00000519138 KIAA1551Q9HCM1 1747 aa16.87■□□□□ 0.29
MCM4-206ENST00000519138 INTS5Q6P9B9 1019 aaKnown RBP16.86■□□□□ 0.29
MCM4-206ENST00000519138 IL17REQ8NFR9 667 aa16.86■□□□□ 0.29
MCM4-206ENST00000519138 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
MCM4-206ENST00000519138 KIF13BQ9NQT8 1826 aa16.85■□□□□ 0.29
MCM4-206ENST00000519138 GYS1P13807 737 aa16.85■□□□□ 0.29
MCM4-206ENST00000519138 HMGB2P26583 209 aaKnown RBP16.85■□□□□ 0.29
MCM4-206ENST00000519138 RFC4P35249 363 aa16.85■□□□□ 0.29
MCM4-206ENST00000519138 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
MCM4-206ENST00000519138 CFAP53Q96M91 514 aa16.85■□□□□ 0.29
MCM4-206ENST00000519138 CD2APQ9Y5K6 639 aa16.85■□□□□ 0.29
MCM4-206ENST00000519138 DLG5Q8TDM6 1919 aa16.84■□□□□ 0.29
MCM4-206ENST00000519138 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
MCM4-206ENST00000519138 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
MCM4-206ENST00000519138 GNAT3A8MTJ3 354 aa16.83■□□□□ 0.28
MCM4-206ENST00000519138 KCNQ3O43525 872 aa16.83■□□□□ 0.28
MCM4-206ENST00000519138 CYP19A1P11511 503 aaPredicted RBP16.82■□□□□ 0.28
MCM4-206ENST00000519138 FKBP8Q14318 412 aa16.82■□□□□ 0.28
MCM4-206ENST00000519138 GAS2L2Q8NHY3 880 aa16.82■□□□□ 0.28
MCM4-206ENST00000519138 DCTN1Q14203 1278 aa16.81■□□□□ 0.28
MCM4-206ENST00000519138 CCDC87Q9NVE4 849 aa16.81■□□□□ 0.28
MCM4-206ENST00000519138 ZBTB1Q9Y2K1 713 aa16.81■□□□□ 0.28
MCM4-206ENST00000519138 AFDNP55196 1824 aaKnown RBP16.81■□□□□ 0.28
MCM4-206ENST00000519138 MCM10Q7L590 875 aa16.8■□□□□ 0.28
MCM4-206ENST00000519138 ZNF496Q96IT1 587 aaPredicted RBP16.8■□□□□ 0.28
MCM4-206ENST00000519138 PXDNLA1KZ92 1463 aa16.8■□□□□ 0.28
MCM4-206ENST00000519138 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
MCM4-206ENST00000519138 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
MCM4-206ENST00000519138 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
MCM4-206ENST00000519138 CANXP27824 592 aaKnown RBP16.79■□□□□ 0.28
MCM4-206ENST00000519138 DDR1Q08345 913 aa16.79■□□□□ 0.28
MCM4-206ENST00000519138 TEFQ10587 303 aa16.79■□□□□ 0.28
MCM4-206ENST00000519138 USPL1Q5W0Q7 1092 aa16.79■□□□□ 0.28
MCM4-206ENST00000519138 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
MCM4-206ENST00000519138 BRCA1P38398 1863 aaKnown RBP16.79■□□□□ 0.28
MCM4-206ENST00000519138 TTC5Q8N0Z6 440 aa16.78■□□□□ 0.28
MCM4-206ENST00000519138 NLGN1Q8N2Q7 840 aa16.78■□□□□ 0.28
MCM4-206ENST00000519138 PIAS4Q8N2W9 510 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms