RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 NFX1Q12986 1120 aaKnown RBP7.61□□□□□ -1.19
SKP1-205ENST00000519054 TMEM214Q6NUQ4 689 aaKnown RBP7.61□□□□□ -1.19
SKP1-205ENST00000519054 CCDC155Q8N6L0 562 aa7.61□□□□□ -1.19
SKP1-205ENST00000519054 ZNF358Q9NW07 568 aa7.61□□□□□ -1.19
SKP1-205ENST00000519054 SENP3-EIF4A1A0A087X0R7 540 aa7.6□□□□□ -1.19
SKP1-205ENST00000519054 SLC35F4A4IF30 521 aa7.6□□□□□ -1.19
SKP1-205ENST00000519054 WASLO00401 505 aaPredicted RBP7.6□□□□□ -1.19
SKP1-205ENST00000519054 GTF2E1P29083 439 aaPredicted RBP7.6□□□□□ -1.19
SKP1-205ENST00000519054 KANK4Q5T7N3 995 aaPredicted RBP7.6□□□□□ -1.19
SKP1-205ENST00000519054 CCDC102BQ68D86 513 aa7.6□□□□□ -1.19
SKP1-205ENST00000519054 NBPF10Q6P3W6 841 aaKnown RBP7.6□□□□□ -1.19
SKP1-205ENST00000519054 NBPF15Q8N660 670 aa7.6□□□□□ -1.19
SKP1-205ENST00000519054 CCDC97Q96F63 343 aaPredicted RBP7.6□□□□□ -1.19
SKP1-205ENST00000519054 TIMELESSQ9UNS1 1208 aa7.6□□□□□ -1.19
SKP1-205ENST00000519054 SPATA31C2B4DYI2 1134 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 H3BM21 787 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 WFS1O76024 890 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 PHKA2P46019 1235 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 SMTNP53814 917 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 CDCA8Q53HL2 280 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 GNASQ5JWF2 1037 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 LARP1Q6PKG0 1096 aaKnown RBP7.59□□□□□ -1.19
SKP1-205ENST00000519054 TREML4Q6UXN2 200 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 TAS1R3Q7RTX0 852 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 LARGE2Q8N3Y3 721 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 SLC16A10Q8TF71 515 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 VRTNQ9H8Y1 702 aa7.59□□□□□ -1.19
SKP1-205ENST00000519054 BACH1O14867 736 aa7.58□□□□□ -1.2
SKP1-205ENST00000519054 CRTC2Q53ET0 693 aaPredicted RBP7.58□□□□□ -1.2
SKP1-205ENST00000519054 ERICH6Q7L0X2 663 aa7.58□□□□□ -1.2
SKP1-205ENST00000519054 NPAS3Q8IXF0 933 aa7.58□□□□□ -1.2
SKP1-205ENST00000519054 SLC4A9Q96Q91 983 aa7.58□□□□□ -1.2
SKP1-205ENST00000519054 C1orf115Q9H7X2 142 aa7.58□□□□□ -1.2
SKP1-205ENST00000519054 A6NJY4 79 aa7.57□□□□□ -1.2
SKP1-205ENST00000519054 SFI1A8K8P3 1242 aa7.57□□□□□ -1.2
SKP1-205ENST00000519054 C4orf17Q53FE4 359 aa7.57□□□□□ -1.2
SKP1-205ENST00000519054 PPARGC1BQ86YN6 1023 aaKnown RBP7.57□□□□□ -1.2
SKP1-205ENST00000519054 SIX5Q8N196 739 aa7.57□□□□□ -1.2
SKP1-205ENST00000519054 RHBDD1Q8TEB9 315 aa7.57□□□□□ -1.2
SKP1-205ENST00000519054 TIMMDC1Q9NPL8 285 aa7.57□□□□□ -1.2
SKP1-205ENST00000519054 SERPINA10Q9UK55 444 aa7.57□□□□□ -1.2
SKP1-205ENST00000519054 RBM19Q9Y4C8 960 aaKnown RBP7.57□□□□□ -1.2
SKP1-205ENST00000519054 USP17L15C9J2P7 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L10C9JJH3 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L13C9JLJ4 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L12C9JPN9 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L11C9JVI0 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L21D6R901 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 ITGA6P23229 1130 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 PTK7Q13308 1070 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 LCE2CQ5TA81 110 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 TNS4Q8IZW8 715 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 CCDC82Q8N4S0 544 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 GAS2L1Q99501 681 aaPredicted RBP7.56□□□□□ -1.2
SKP1-205ENST00000519054 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
SKP1-205ENST00000519054 ERBB4Q15303 1308 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.55□□□□□ -1.2
SKP1-205ENST00000519054 DKK1O94907 266 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 PLA2G4AP47712 749 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 MTFR1Q15390 333 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 WDR44Q5JSH3 913 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 TBCELQ5QJ74 424 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
SKP1-205ENST00000519054 RIPOR1Q6ZS17 1223 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 IRF7Q92985 503 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 DYRK1BQ9Y463 629 aa7.55□□□□□ -1.2
SKP1-205ENST00000519054 CDC14CA4D256 554 aa7.54□□□□□ -1.2
SKP1-205ENST00000519054 FAM196BA6NMK8 535 aa7.54□□□□□ -1.2
SKP1-205ENST00000519054 SUPT5HO00267 1087 aaKnown RBP7.54□□□□□ -1.2
SKP1-205ENST00000519054 CDK2AP1O14519 115 aa7.54□□□□□ -1.2
SKP1-205ENST00000519054 DPYDQ12882 1025 aa7.54□□□□□ -1.2
SKP1-205ENST00000519054 TSEN2Q8NCE0 465 aaKnown RBP7.54□□□□□ -1.2
SKP1-205ENST00000519054 CUEDC1Q9NWM3 386 aaPredicted RBP7.54□□□□□ -1.2
SKP1-205ENST00000519054 CABP1Q9NZU7 370 aa7.54□□□□□ -1.2
SKP1-205ENST00000519054 SCHIP1Q9P0W5 487 aaPredicted RBP7.54□□□□□ -1.2
SKP1-205ENST00000519054 IQSEC3Q9UPP2 1182 aaPredicted RBP7.54□□□□□ -1.2
SKP1-205ENST00000519054 EPHA4P54764 986 aa7.53□□□□□ -1.2
SKP1-205ENST00000519054 SEC13P55735 322 aa7.53□□□□□ -1.2
SKP1-205ENST00000519054 ANKMY2Q8IV38 441 aa7.53□□□□□ -1.2
SKP1-205ENST00000519054 SLC9A9Q8IVB4 645 aa7.53□□□□□ -1.2
SKP1-205ENST00000519054 VWA5B2Q8N398 1253 aa7.53□□□□□ -1.2
SKP1-205ENST00000519054 NIFKQ9BYG3 293 aaKnown RBP7.53□□□□□ -1.2
SKP1-205ENST00000519054 GPAMQ9HCL2 828 aa7.53□□□□□ -1.2
SKP1-205ENST00000519054 A0A1B0GTH6 734 aa7.52□□□□□ -1.21
SKP1-205ENST00000519054 M0R2N6 131 aa7.52□□□□□ -1.21
SKP1-205ENST00000519054 LGR5O75473 907 aa7.52□□□□□ -1.21
SKP1-205ENST00000519054 FOXK2Q01167 660 aa7.52□□□□□ -1.21
SKP1-205ENST00000519054 AIDAQ96BJ3 306 aa7.52□□□□□ -1.21
SKP1-205ENST00000519054 PARP3Q9Y6F1 533 aa7.52□□□□□ -1.21
SKP1-205ENST00000519054 F11P03951 625 aa7.51□□□□□ -1.21
SKP1-205ENST00000519054 VSIG8P0DPA2 414 aa7.51□□□□□ -1.21
SKP1-205ENST00000519054 GMPRP36959 345 aa7.51□□□□□ -1.21
SKP1-205ENST00000519054 SRPK2P78362 688 aaKnown RBP7.51□□□□□ -1.21
SKP1-205ENST00000519054 ZNF295-AS1Q8N0V1 137 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms