RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 USP17L13C9JLJ4 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L12C9JPN9 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L11C9JVI0 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L21D6R901 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L18D6R9N7 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L22D6RA61 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L17D6RBQ6 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L19D6RCP7 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L20D6RJB6 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 SNRPBP14678 240 aaKnown RBP10.28□□□□□ -0.76
SQLE-203ENST00000518931 RNF144AP50876 292 aaPredicted RBP10.28□□□□□ -0.76
SQLE-203ENST00000518931 USP17L24Q0WX57 530 aa10.28□□□□□ -0.76
SQLE-203ENST00000518931 SOBPA7XYQ1 873 aa10.27□□□□□ -0.77
SQLE-203ENST00000518931 WASLO00401 505 aaPredicted RBP10.27□□□□□ -0.77
SQLE-203ENST00000518931 MAN1A2O60476 641 aa10.27□□□□□ -0.77
SQLE-203ENST00000518931 DKK1O94907 266 aa10.27□□□□□ -0.77
SQLE-203ENST00000518931 DPYDQ12882 1025 aa10.27□□□□□ -0.77
SQLE-203ENST00000518931 SLC27A3Q5K4L6 730 aa10.27□□□□□ -0.77
SQLE-203ENST00000518931 FOXD4L5Q5VV16 416 aaPredicted RBP10.27□□□□□ -0.77
SQLE-203ENST00000518931 SIX5Q8N196 739 aa10.27□□□□□ -0.77
SQLE-203ENST00000518931 ZNF358Q9NW07 568 aa10.27□□□□□ -0.77
SQLE-203ENST00000518931 HRH3Q9Y5N1 445 aa10.27□□□□□ -0.77
SQLE-203ENST00000518931 SFI1A8K8P3 1242 aa10.26□□□□□ -0.77
SQLE-203ENST00000518931 BACH1O14867 736 aa10.26□□□□□ -0.77
SQLE-203ENST00000518931 ZNF787Q6DD87 383 aa10.26□□□□□ -0.77
SQLE-203ENST00000518931 ANKMY2Q8IV38 441 aa10.26□□□□□ -0.77
SQLE-203ENST00000518931 RNF217Q8TC41 542 aa10.26□□□□□ -0.77
SQLE-203ENST00000518931 PPP1R15AO75807 674 aaPredicted RBP10.25□□□□□ -0.77
SQLE-203ENST00000518931 GPC1P35052 558 aa10.25□□□□□ -0.77
SQLE-203ENST00000518931 PRICKLE2Q7Z3G6 844 aa10.25□□□□□ -0.77
SQLE-203ENST00000518931 GRIP2Q9C0E4 1043 aa10.25□□□□□ -0.77
SQLE-203ENST00000518931 DNMT3LQ9UJW3 386 aa10.25□□□□□ -0.77
SQLE-203ENST00000518931 ACIN1Q9UKV3 1341 aaKnown RBP10.25□□□□□ -0.77
SQLE-203ENST00000518931 ATG7O95352 703 aa10.24□□□□□ -0.77
SQLE-203ENST00000518931 SMTNP53814 917 aa10.24□□□□□ -0.77
SQLE-203ENST00000518931 SEC13P55735 322 aa10.24□□□□□ -0.77
SQLE-203ENST00000518931 TLR1Q15399 786 aa10.24□□□□□ -0.77
SQLE-203ENST00000518931 FAM200AQ8TCP9 573 aa10.24□□□□□ -0.77
SQLE-203ENST00000518931 SLC4A9Q96Q91 983 aa10.24□□□□□ -0.77
SQLE-203ENST00000518931 ZSCAN10Q96SZ4 725 aaPredicted RBP10.24□□□□□ -0.77
SQLE-203ENST00000518931 LYSMD3Q7Z3D4 306 aa10.23□□□□□ -0.77
SQLE-203ENST00000518931 TNS4Q8IZW8 715 aa10.23□□□□□ -0.77
SQLE-203ENST00000518931 FHDC1Q9C0D6 1143 aaPredicted RBP10.23□□□□□ -0.77
SQLE-203ENST00000518931 NOVA2Q9UNW9 492 aaKnown RBP10.23□□□□□ -0.77
SQLE-203ENST00000518931 A6NJY4 79 aa10.22□□□□□ -0.77
SQLE-203ENST00000518931 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.22□□□□□ -0.77
SQLE-203ENST00000518931 TMEM214Q6NUQ4 689 aaKnown RBP10.22□□□□□ -0.77
SQLE-203ENST00000518931 TTBK1Q5TCY1 1321 aaPredicted RBP10.22□□□□□ -0.77
SQLE-203ENST00000518931 GTF2E1P29083 439 aaPredicted RBP10.21□□□□□ -0.77
SQLE-203ENST00000518931 POU4F2Q12837 409 aa10.21□□□□□ -0.77
SQLE-203ENST00000518931 ELOAQ14241 798 aaKnown RBP10.21□□□□□ -0.77
SQLE-203ENST00000518931 TSEN2Q8NCE0 465 aaKnown RBP10.21□□□□□ -0.77
SQLE-203ENST00000518931 HINFPQ9BQA5 517 aa10.21□□□□□ -0.77
SQLE-203ENST00000518931 M0R2N6 131 aa10.2□□□□□ -0.78
SQLE-203ENST00000518931 ZMIZ1Q9ULJ6 1067 aa10.2□□□□□ -0.78
SQLE-203ENST00000518931 CDK2AP1O14519 115 aa10.19□□□□□ -0.78
SQLE-203ENST00000518931 RHOQP17081 205 aa10.19□□□□□ -0.78
SQLE-203ENST00000518931 MTFR1Q15390 333 aa10.19□□□□□ -0.78
SQLE-203ENST00000518931 PPARGC1BQ86YN6 1023 aaKnown RBP10.19□□□□□ -0.78
SQLE-203ENST00000518931 LGR5O75473 907 aa10.18□□□□□ -0.78
SQLE-203ENST00000518931 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
SQLE-203ENST00000518931 SCHIP1Q9P0W5 487 aaPredicted RBP10.18□□□□□ -0.78
SQLE-203ENST00000518931 SPATA31C2B4DYI2 1134 aa10.17□□□□□ -0.78
SQLE-203ENST00000518931 PHKA2P46019 1235 aa10.17□□□□□ -0.78
SQLE-203ENST00000518931 EPHA4P54764 986 aa10.17□□□□□ -0.78
SQLE-203ENST00000518931 GNASQ5JWF2 1037 aa10.17□□□□□ -0.78
SQLE-203ENST00000518931 TBCELQ5QJ74 424 aa10.17□□□□□ -0.78
SQLE-203ENST00000518931 TAS1R3Q7RTX0 852 aa10.17□□□□□ -0.78
SQLE-203ENST00000518931 USP3Q9Y6I4 520 aa10.17□□□□□ -0.78
SQLE-203ENST00000518931 TMEM164Q5U3C3 297 aa10.16□□□□□ -0.78
SQLE-203ENST00000518931 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
SQLE-203ENST00000518931 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
SQLE-203ENST00000518931 RHBDD1Q8TEB9 315 aa10.16□□□□□ -0.78
SQLE-203ENST00000518931 IQSEC3Q9UPP2 1182 aaPredicted RBP10.16□□□□□ -0.78
SQLE-203ENST00000518931 FOXK2Q01167 660 aa10.15□□□□□ -0.78
SQLE-203ENST00000518931 PTSQ03393 145 aa10.15□□□□□ -0.78
SQLE-203ENST00000518931 C4orf17Q53FE4 359 aa10.15□□□□□ -0.78
SQLE-203ENST00000518931 SLC9A9Q8IVB4 645 aa10.15□□□□□ -0.78
SQLE-203ENST00000518931 CABP1Q9NZU7 370 aa10.15□□□□□ -0.78
SQLE-203ENST00000518931 CSB-PGBD3P0DP91 1061 aa10.14□□□□□ -0.79
SQLE-203ENST00000518931 WDR44Q5JSH3 913 aa10.14□□□□□ -0.79
SQLE-203ENST00000518931 NIFKQ9BYG3 293 aaKnown RBP10.14□□□□□ -0.79
SQLE-203ENST00000518931 TSPAN10Q9H1Z9 355 aaPredicted RBP10.14□□□□□ -0.79
SQLE-203ENST00000518931 ATAD2Q6PL18 1390 aa10.14□□□□□ -0.79
SQLE-203ENST00000518931 FAM69CQ0P6D2 419 aa10.13□□□□□ -0.79
SQLE-203ENST00000518931 SCG3Q8WXD2 468 aaKnown RBP10.13□□□□□ -0.79
SQLE-203ENST00000518931 TIMMDC1Q9NPL8 285 aa10.13□□□□□ -0.79
SQLE-203ENST00000518931 SENP3-EIF4A1A0A087X0R7 540 aa10.12□□□□□ -0.79
SQLE-203ENST00000518931 GAS2L2Q8NHY3 880 aa10.12□□□□□ -0.79
SQLE-203ENST00000518931 PARP3Q9Y6F1 533 aa10.12□□□□□ -0.79
SQLE-203ENST00000518931 SLC35F4A4IF30 521 aa10.11□□□□□ -0.79
SQLE-203ENST00000518931 PLA2G4AP47712 749 aa10.11□□□□□ -0.79
SQLE-203ENST00000518931 CHMP7Q8WUX9 453 aaPredicted RBP10.11□□□□□ -0.79
SQLE-203ENST00000518931 AIDAQ96BJ3 306 aa10.11□□□□□ -0.79
SQLE-203ENST00000518931 CARNS1A5YM72 827 aa10.1□□□□□ -0.79
SQLE-203ENST00000518931 C21orf2O43822 256 aa10.1□□□□□ -0.79
SQLE-203ENST00000518931 PPP1R12BO60237 982 aaPredicted RBP10.1□□□□□ -0.79
SQLE-203ENST00000518931 NOS2P35228 1153 aa10.1□□□□□ -0.79
SQLE-203ENST00000518931 SWI5Q1ZZU3 235 aa10.1□□□□□ -0.79
SQLE-203ENST00000518931 ZNF295-AS1Q8N0V1 137 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms