RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 MRC2Q9UBG0 1479 aa7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 ANKRD33BA6NCL7 494 aa7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 C21orf2O43822 256 aa7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 ICMTO60725 284 aa7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 NOM1Q5C9Z4 860 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 GIPC2Q8TF65 315 aa7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 GTF3C2Q8WUA4 911 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 TTBK1Q5TCY1 1321 aaPredicted RBP7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 TARBP1Q13395 1621 aaKnown RBP7.19□□□□□ -1.26
CTNNA1-212ENST00000518919 POTEMA6NI47 508 aa7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 M0R2N6 131 aa7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 ZBTB24O43167 697 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 ZNF16P17020 682 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 WEE1P30291 646 aa7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 FKBP5Q13451 457 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 INTS6LQ5JSJ4 861 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 VASH1Q7L8A9 365 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 NPAS4Q8IUM7 802 aa7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 MRRFQ96E11 262 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 ESF1Q9H501 851 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 SEPT3Q9UH03 358 aa7.18□□□□□ -1.26
CTNNA1-212ENST00000518919 PTCD1O75127 700 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-212ENST00000518919 MAPK1P28482 360 aa7.17□□□□□ -1.26
CTNNA1-212ENST00000518919 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.17□□□□□ -1.26
CTNNA1-212ENST00000518919 ZNF358Q9NW07 568 aa7.17□□□□□ -1.26
CTNNA1-212ENST00000518919 MAP4K5Q9Y4K4 846 aa7.17□□□□□ -1.26
CTNNA1-212ENST00000518919 DNMT3AQ9Y6K1 912 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-212ENST00000518919 SCTRP47872 440 aa7.16□□□□□ -1.26
CTNNA1-212ENST00000518919 TRIM32Q13049 653 aa7.16□□□□□ -1.26
CTNNA1-212ENST00000518919 SF3B2Q13435 895 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-212ENST00000518919 KIAA1522Q9P206 1035 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-212ENST00000518919 GAPVD1Q14C86 1478 aa7.16□□□□□ -1.26
CTNNA1-212ENST00000518919 WDR62O43379 1518 aa7.16□□□□□ -1.26
CTNNA1-212ENST00000518919 ERVH48-1M5A8F1 160 aa7.15□□□□□ -1.26
CTNNA1-212ENST00000518919 IGSF3O75054 1194 aa7.15□□□□□ -1.26
CTNNA1-212ENST00000518919 VARSP26640 1264 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-212ENST00000518919 MTMR3Q13615 1198 aa7.15□□□□□ -1.26
CTNNA1-212ENST00000518919 CC2D2BQ6DHV5 1058 aa7.15□□□□□ -1.26
CTNNA1-212ENST00000518919 PURBQ96QR8 312 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-212ENST00000518919 DCTN4Q9UJW0 460 aa7.15□□□□□ -1.26
CTNNA1-212ENST00000518919 TDRD9Q8NDG6 1382 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-212ENST00000518919 PPEF1O14829 653 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-212ENST00000518919 FOXO3O43524 673 aa7.14□□□□□ -1.27
CTNNA1-212ENST00000518919 IGFBP4P22692 258 aa7.14□□□□□ -1.27
CTNNA1-212ENST00000518919 WNT7BP56706 349 aa7.14□□□□□ -1.27
CTNNA1-212ENST00000518919 ERVK-9P63128 1117 aa7.14□□□□□ -1.27
CTNNA1-212ENST00000518919 FKBP4Q02790 459 aaKnown RBP eCLIP7.14□□□□□ -1.27
CTNNA1-212ENST00000518919 ZNF326Q5BKZ1 582 aaKnown RBP7.14□□□□□ -1.27
CTNNA1-212ENST00000518919 PCF11O94913 1555 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 ADAMTS12P58397 1594 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 EFCAB5A4FU69 1503 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 TMEM229AB2RXF0 380 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 FSHRP23945 695 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 GDF10P55107 478 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 CAPN12Q6ZSI9 719 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 ZSCAN29Q8IWY8 852 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 HELQQ8TDG4 1101 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 COL26A1Q96A83 441 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 VTI1AQ96AJ9 217 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 ASB16Q96NS5 453 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 CYLDQ9NQC7 956 aa7.13□□□□□ -1.27
CTNNA1-212ENST00000518919 CTTNBP2Q8WZ74 1663 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 THOC2Q8NI27 1593 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 BACH1O14867 736 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 SCNN1DP51172 638 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 SKOR1P84550 965 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 ARHGAP4P98171 946 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 NAA30Q147X3 362 aaPredicted RBP7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 ARID5BQ14865 1188 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 EHBP1Q8NDI1 1231 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 GAS2L2Q8NHY3 880 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 SCG3Q8WXD2 468 aaKnown RBP7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 OSBPL3Q9H4L5 887 aa7.12□□□□□ -1.27
CTNNA1-212ENST00000518919 IFT140Q96RY7 1462 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 FHOD3Q2V2M9 1422 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 RNF223E7ERA6 249 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 ZEB1P37275 1124 aaPredicted RBP7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 GGCXP38435 758 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 DHX9Q08211 1270 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 TNS4Q8IZW8 715 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 ANKLE1Q8NAG6 615 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 IGSF5Q9NSI5 407 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 PBRM1Q86U86 1689 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 TIAM1Q13009 1591 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 SAMD9Q5K651 1589 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 MAP3K1Q13233 1512 aa7.11□□□□□ -1.27
CTNNA1-212ENST00000518919 CFAP43Q8NDM7 1665 aa7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 WASLO00401 505 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 STAU1O95793 577 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 PLA2G2CQ5R387 149 aa7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 BCL11AQ9H165 835 aa7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 TMPRSS4Q9NRS4 437 aa7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 SERTAD1Q9UHV2 236 aa7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 ZNF608Q9ULD9 1512 aaPredicted RBP7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 AQRO60306 1485 aaKnown RBP eCLIP7.1□□□□□ -1.273e-11■■■■□ 23.9
CTNNA1-212ENST00000518919 FHAD1B1AJZ9 1412 aa7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 RRBP1Q9P2E9 1410 aaKnown RBP7.1□□□□□ -1.27
CTNNA1-212ENST00000518919 FAM13AO94988 1023 aa7.09□□□□□ -1.27
CTNNA1-212ENST00000518919 INHAP05111 366 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms