RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 FHDC1Q9C0D6 1143 aaPredicted RBP17.73■□□□□ 0.43
TMEM55A-203ENST00000518869 ITGB4P16144 1822 aa17.72■□□□□ 0.43
TMEM55A-203ENST00000518869 NEFMP07197 916 aa17.71■□□□□ 0.43
TMEM55A-203ENST00000518869 PPP2R1AP30153 589 aa17.71■□□□□ 0.43
TMEM55A-203ENST00000518869 QSER1Q2KHR3 1735 aa17.71■□□□□ 0.43
TMEM55A-203ENST00000518869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
TMEM55A-203ENST00000518869 GNPATO15228 680 aa17.7■□□□□ 0.42
TMEM55A-203ENST00000518869 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
TMEM55A-203ENST00000518869 RC3H1Q5TC82 1133 aaKnown RBP17.7■□□□□ 0.42
TMEM55A-203ENST00000518869 SLC52A2Q9HAB3 445 aa17.7■□□□□ 0.42
TMEM55A-203ENST00000518869 RTCBQ9Y3I0 505 aaKnown RBP17.7■□□□□ 0.42
TMEM55A-203ENST00000518869 TOGARAM1Q9Y4F4 1720 aa17.69■□□□□ 0.42
TMEM55A-203ENST00000518869 MAP3K5Q99683 1374 aa17.69■□□□□ 0.42
TMEM55A-203ENST00000518869 ADRA2BP18089 450 aa17.69■□□□□ 0.42
TMEM55A-203ENST00000518869 TRAPPC3LQ5T215 181 aa17.69■□□□□ 0.42
TMEM55A-203ENST00000518869 LINC00116Q8NCU8 138 aa17.69■□□□□ 0.42
TMEM55A-203ENST00000518869 KDM6AO15550 1401 aaPredicted RBP17.69■□□□□ 0.42
TMEM55A-203ENST00000518869 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
TMEM55A-203ENST00000518869 RNMTO43148 476 aaKnown RBP17.68■□□□□ 0.42
TMEM55A-203ENST00000518869 FCHSD2O94868 740 aa17.68■□□□□ 0.42
TMEM55A-203ENST00000518869 PHF14O94880 888 aa17.68■□□□□ 0.42
TMEM55A-203ENST00000518869 U2AF1L5P0DN76 240 aaPredicted RBP17.68■□□□□ 0.42
TMEM55A-203ENST00000518869 U2AF1Q01081 240 aaKnown RBP eCLIP17.68■□□□□ 0.42
TMEM55A-203ENST00000518869 KLHL34Q8N239 644 aa17.68■□□□□ 0.42
TMEM55A-203ENST00000518869 PNNQ9H307 717 aaKnown RBP17.68■□□□□ 0.42
TMEM55A-203ENST00000518869 C5P01031 1676 aa17.67■□□□□ 0.42
TMEM55A-203ENST00000518869 PTCD1O75127 700 aaKnown RBP17.67■□□□□ 0.42
TMEM55A-203ENST00000518869 ZEB1P37275 1124 aaPredicted RBP17.67■□□□□ 0.42
TMEM55A-203ENST00000518869 ITPK1Q13572 414 aa17.67■□□□□ 0.42
TMEM55A-203ENST00000518869 TEFQ10587 303 aa17.66■□□□□ 0.42
TMEM55A-203ENST00000518869 CNTNAP4Q9C0A0 1308 aa17.66■□□□□ 0.42
TMEM55A-203ENST00000518869 C4BP0C0L5 1744 aa17.65■□□□□ 0.42
TMEM55A-203ENST00000518869 RFC4P35249 363 aa17.65■□□□□ 0.42
TMEM55A-203ENST00000518869 RALBP1Q15311 655 aa17.65■□□□□ 0.42
TMEM55A-203ENST00000518869 TTC5Q8N0Z6 440 aa17.65■□□□□ 0.42
TMEM55A-203ENST00000518869 LGR6Q9HBX8 967 aa17.65■□□□□ 0.42
TMEM55A-203ENST00000518869 RPS6KA4O75676 772 aa17.64■□□□□ 0.41
TMEM55A-203ENST00000518869 PRKAR2BP31323 418 aa17.64■□□□□ 0.41
TMEM55A-203ENST00000518869 NLGN1Q8N2Q7 840 aa17.64■□□□□ 0.41
TMEM55A-203ENST00000518869 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.41
TMEM55A-203ENST00000518869 CD2APQ9Y5K6 639 aa17.64■□□□□ 0.41
TMEM55A-203ENST00000518869 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
TMEM55A-203ENST00000518869 GPR162Q16538 588 aa17.63■□□□□ 0.41
TMEM55A-203ENST00000518869 MSL1Q68DK7 614 aa17.63■□□□□ 0.41
TMEM55A-203ENST00000518869 VSIG10Q8N0Z9 540 aa17.63■□□□□ 0.41
TMEM55A-203ENST00000518869 RSPH6AQ9H0K4 717 aa17.62■□□□□ 0.41
TMEM55A-203ENST00000518869 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
TMEM55A-203ENST00000518869 YY1P25490 414 aa17.61■□□□□ 0.41
TMEM55A-203ENST00000518869 SLC4A9Q96Q91 983 aa17.61■□□□□ 0.41
TMEM55A-203ENST00000518869 TEX13AQ9BXU3 409 aaPredicted RBP17.61■□□□□ 0.41
TMEM55A-203ENST00000518869 ZNF831Q5JPB2 1677 aa17.61■□□□□ 0.41
TMEM55A-203ENST00000518869 HTATSF1O43719 755 aaKnown RBP17.6■□□□□ 0.41
TMEM55A-203ENST00000518869 STARD3NLO95772 234 aa17.6■□□□□ 0.41
TMEM55A-203ENST00000518869 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
TMEM55A-203ENST00000518869 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
TMEM55A-203ENST00000518869 ARHGEF1Q92888 912 aaKnown RBP17.59■□□□□ 0.41
TMEM55A-203ENST00000518869 GRIN3BO60391 1043 aa17.58■□□□□ 0.4
TMEM55A-203ENST00000518869 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
TMEM55A-203ENST00000518869 SCN11AQ9UI33 1791 aa17.58■□□□□ 0.4
TMEM55A-203ENST00000518869 SLC39A6Q13433 755 aa17.57■□□□□ 0.4
TMEM55A-203ENST00000518869 IL17REQ8NFR9 667 aa17.57■□□□□ 0.4
TMEM55A-203ENST00000518869 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
TMEM55A-203ENST00000518869 CCDC87Q9NVE4 849 aa17.57■□□□□ 0.4
TMEM55A-203ENST00000518869 MRC1P22897 1456 aa17.56■□□□□ 0.4
TMEM55A-203ENST00000518869 TUBGCP6Q96RT7 1819 aa17.56■□□□□ 0.4
TMEM55A-203ENST00000518869 ZPR1O75312 459 aa17.56■□□□□ 0.4
TMEM55A-203ENST00000518869 ZNF790Q6PG37 636 aa17.56■□□□□ 0.4
TMEM55A-203ENST00000518869 AMIGO3Q86WK7 504 aa17.56■□□□□ 0.4
TMEM55A-203ENST00000518869 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
TMEM55A-203ENST00000518869 PELP1Q8IZL8 1130 aaKnown RBP17.56■□□□□ 0.4
TMEM55A-203ENST00000518869 COL24A1Q17RW2 1714 aa17.55■□□□□ 0.4
TMEM55A-203ENST00000518869 BTBD11A6QL63 1104 aa17.55■□□□□ 0.4
TMEM55A-203ENST00000518869 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
TMEM55A-203ENST00000518869 PARP3Q9Y6F1 533 aa17.55■□□□□ 0.4
TMEM55A-203ENST00000518869 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
TMEM55A-203ENST00000518869 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
TMEM55A-203ENST00000518869 MMP10P09238 476 aa17.54■□□□□ 0.4
TMEM55A-203ENST00000518869 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
TMEM55A-203ENST00000518869 A0A087WZG4 1122 aa17.53■□□□□ 0.4
TMEM55A-203ENST00000518869 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
TMEM55A-203ENST00000518869 SMIM5Q71RC9 77 aa17.53■□□□□ 0.4
TMEM55A-203ENST00000518869 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
TMEM55A-203ENST00000518869 GYS1P13807 737 aa17.52■□□□□ 0.4
TMEM55A-203ENST00000518869 NLGN2Q8NFZ4 835 aa17.52■□□□□ 0.4
TMEM55A-203ENST00000518869 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
TMEM55A-203ENST00000518869 TGFB2P61812 414 aa17.51■□□□□ 0.39
TMEM55A-203ENST00000518869 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
TMEM55A-203ENST00000518869 USP42Q9H9J4 1324 aaKnown RBP17.5■□□□□ 0.39
TMEM55A-203ENST00000518869 TAF7Q15545 349 aaPredicted RBP17.5■□□□□ 0.39
TMEM55A-203ENST00000518869 ZNF496Q96IT1 587 aaPredicted RBP17.5■□□□□ 0.39
TMEM55A-203ENST00000518869 ADAMTS7Q9UKP4 1686 aa17.5■□□□□ 0.39
TMEM55A-203ENST00000518869 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
TMEM55A-203ENST00000518869 SOS1Q07889 1333 aaPredicted RBP17.49■□□□□ 0.39
TMEM55A-203ENST00000518869 NARFQ9UHQ1 456 aa17.49■□□□□ 0.39
TMEM55A-203ENST00000518869 COL5A3P25940 1745 aaPredicted RBP17.48■□□□□ 0.39
TMEM55A-203ENST00000518869 SNRPA1P09661 255 aaKnown RBP17.48■□□□□ 0.39
TMEM55A-203ENST00000518869 CANXP27824 592 aaKnown RBP17.48■□□□□ 0.39
TMEM55A-203ENST00000518869 MCM10Q7L590 875 aa17.48■□□□□ 0.39
TMEM55A-203ENST00000518869 CICQ96RK0 1608 aaPredicted RBP17.47■□□□□ 0.39
TMEM55A-203ENST00000518869 LMOD3Q0VAK6 560 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms