RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 SIK1P57059 783 aa17.87■□□□□ 0.45
VEGFA-219ENST00000518824 SPON1Q9HCB6 807 aa17.87■□□□□ 0.45
VEGFA-219ENST00000518824 ADAMTS7Q9UKP4 1686 aa17.87■□□□□ 0.45
VEGFA-219ENST00000518824 C4BP0C0L5 1744 aa17.86■□□□□ 0.45
VEGFA-219ENST00000518824 RNMTO43148 476 aaKnown RBP17.86■□□□□ 0.45
VEGFA-219ENST00000518824 U2AF1L5P0DN76 240 aaPredicted RBP17.86■□□□□ 0.45
VEGFA-219ENST00000518824 PTGER2P43116 358 aa17.86■□□□□ 0.45
VEGFA-219ENST00000518824 U2AF1Q01081 240 aaKnown RBP eCLIP17.86■□□□□ 0.45
VEGFA-219ENST00000518824 LINC00116Q8NCU8 138 aa17.86■□□□□ 0.45
VEGFA-219ENST00000518824 TFCP2L1Q9NZI6 479 aa17.85■□□□□ 0.45
VEGFA-219ENST00000518824 COL23A1Q86Y22 540 aaPredicted RBP17.84■□□□□ 0.45
VEGFA-219ENST00000518824 MRC1P22897 1456 aa17.83■□□□□ 0.45
VEGFA-219ENST00000518824 ATP6V1AP38606 617 aa17.83■□□□□ 0.44
VEGFA-219ENST00000518824 IL17REQ8NFR9 667 aa17.83■□□□□ 0.44
VEGFA-219ENST00000518824 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.44
VEGFA-219ENST00000518824 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
VEGFA-219ENST00000518824 NUDCQ9Y266 331 aa17.83■□□□□ 0.44
VEGFA-219ENST00000518824 UBR3Q6ZT12 1888 aa17.83■□□□□ 0.44
VEGFA-219ENST00000518824 SLC39A6Q13433 755 aa17.82■□□□□ 0.44
VEGFA-219ENST00000518824 RALBP1Q15311 655 aa17.82■□□□□ 0.44
VEGFA-219ENST00000518824 SLC52A2Q9HAB3 445 aa17.82■□□□□ 0.44
VEGFA-219ENST00000518824 PTCD1O75127 700 aaKnown RBP17.81■□□□□ 0.44
VEGFA-219ENST00000518824 MTFR1LQ9H019 292 aa17.81■□□□□ 0.44
VEGFA-219ENST00000518824 MAP3K5Q99683 1374 aa17.8■□□□□ 0.44
VEGFA-219ENST00000518824 COL5A3P25940 1745 aaPredicted RBP17.8■□□□□ 0.44
VEGFA-219ENST00000518824 TJP1Q07157 1748 aa17.8■□□□□ 0.44
VEGFA-219ENST00000518824 MYH14Q7Z406 1995 aaKnown RBP17.79■□□□□ 0.44
VEGFA-219ENST00000518824 COL24A1Q17RW2 1714 aa17.79■□□□□ 0.44
VEGFA-219ENST00000518824 FCHSD2O94868 740 aa17.79■□□□□ 0.44
VEGFA-219ENST00000518824 GAS2L2Q8NHY3 880 aa17.79■□□□□ 0.44
VEGFA-219ENST00000518824 ZNF831Q5JPB2 1677 aa17.79■□□□□ 0.44
VEGFA-219ENST00000518824 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
VEGFA-219ENST00000518824 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
VEGFA-219ENST00000518824 MSH5O43196 834 aa17.78■□□□□ 0.44
VEGFA-219ENST00000518824 PHF14O94880 888 aa17.78■□□□□ 0.44
VEGFA-219ENST00000518824 MSL1Q68DK7 614 aa17.78■□□□□ 0.44
VEGFA-219ENST00000518824 AK7Q96M32 723 aa17.78■□□□□ 0.44
VEGFA-219ENST00000518824 KCPQ6ZWJ8 1503 aa17.77■□□□□ 0.44
VEGFA-219ENST00000518824 MYBBP1AQ9BQG0 1328 aaKnown RBP17.77■□□□□ 0.44
VEGFA-219ENST00000518824 DCTN1Q14203 1278 aa17.77■□□□□ 0.44
VEGFA-219ENST00000518824 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.44
VEGFA-219ENST00000518824 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
VEGFA-219ENST00000518824 PPP1R1BQ9UD71 204 aaPredicted RBP17.77■□□□□ 0.44
VEGFA-219ENST00000518824 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
VEGFA-219ENST00000518824 GNPATO15228 680 aa17.76■□□□□ 0.43
VEGFA-219ENST00000518824 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
VEGFA-219ENST00000518824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.75■□□□□ 0.43
VEGFA-219ENST00000518824 MCM10Q7L590 875 aa17.75■□□□□ 0.43
VEGFA-219ENST00000518824 SLC16A10Q8TF71 515 aa17.75■□□□□ 0.43
VEGFA-219ENST00000518824 CEMIPQ8WUJ3 1361 aa17.75■□□□□ 0.43
VEGFA-219ENST00000518824 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
VEGFA-219ENST00000518824 KCNQ3O43525 872 aa17.74■□□□□ 0.43
VEGFA-219ENST00000518824 DNAJC10Q8IXB1 793 aa17.74■□□□□ 0.43
VEGFA-219ENST00000518824 CICQ96RK0 1608 aaPredicted RBP17.73■□□□□ 0.43
VEGFA-219ENST00000518824 ARXQ96QS3 562 aa17.72■□□□□ 0.43
VEGFA-219ENST00000518824 FHDC1Q9C0D6 1143 aaPredicted RBP17.72■□□□□ 0.43
VEGFA-219ENST00000518824 CNTNAP4Q9C0A0 1308 aa17.72■□□□□ 0.43
VEGFA-219ENST00000518824 SSFA2P28290 1259 aa17.71■□□□□ 0.43
VEGFA-219ENST00000518824 CRKLP46109 303 aaKnown RBP17.71■□□□□ 0.43
VEGFA-219ENST00000518824 TEFQ10587 303 aa17.71■□□□□ 0.43
VEGFA-219ENST00000518824 CCDC184Q52MB2 194 aa17.7■□□□□ 0.42
VEGFA-219ENST00000518824 RC3H1Q5TC82 1133 aaKnown RBP17.7■□□□□ 0.42
VEGFA-219ENST00000518824 INTS5Q6P9B9 1019 aaKnown RBP17.7■□□□□ 0.42
VEGFA-219ENST00000518824 ZNF496Q96IT1 587 aaPredicted RBP17.7■□□□□ 0.42
VEGFA-219ENST00000518824 THUMPD2Q9BTF0 503 aaKnown RBP17.7■□□□□ 0.42
VEGFA-219ENST00000518824 C4AP0C0L4 1744 aa17.69■□□□□ 0.42
VEGFA-219ENST00000518824 RPS6KA4O75676 772 aa17.69■□□□□ 0.42
VEGFA-219ENST00000518824 FLAD1Q8NFF5 587 aa17.69■□□□□ 0.42
VEGFA-219ENST00000518824 SYT17Q9BSW7 474 aa17.69■□□□□ 0.42
VEGFA-219ENST00000518824 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
VEGFA-219ENST00000518824 CYP19A1P11511 503 aaPredicted RBP17.68■□□□□ 0.42
VEGFA-219ENST00000518824 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
VEGFA-219ENST00000518824 CCDC146Q8IYE0 955 aa17.68■□□□□ 0.42
VEGFA-219ENST00000518824 ARHGEF1Q92888 912 aaKnown RBP17.68■□□□□ 0.42
VEGFA-219ENST00000518824 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
VEGFA-219ENST00000518824 KLHL34Q8N239 644 aa17.67■□□□□ 0.42
VEGFA-219ENST00000518824 RTF1Q92541 710 aaKnown RBP17.67■□□□□ 0.42
VEGFA-219ENST00000518824 MIS18AQ9NYP9 233 aa17.67■□□□□ 0.42
VEGFA-219ENST00000518824 PRAMEF22A3QJZ6 481 aa17.66■□□□□ 0.42
VEGFA-219ENST00000518824 BTBD11A6QL63 1104 aa17.66■□□□□ 0.42
VEGFA-219ENST00000518824 POLD1P28340 1107 aa17.66■□□□□ 0.42
VEGFA-219ENST00000518824 TRAPPC3LQ5T215 181 aa17.66■□□□□ 0.42
VEGFA-219ENST00000518824 TTC5Q8N0Z6 440 aa17.66■□□□□ 0.42
VEGFA-219ENST00000518824 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
VEGFA-219ENST00000518824 HMGB2P26583 209 aaKnown RBP17.65■□□□□ 0.42
VEGFA-219ENST00000518824 CCDC87Q9NVE4 849 aa17.65■□□□□ 0.42
VEGFA-219ENST00000518824 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
VEGFA-219ENST00000518824 ZBTB1Q9Y2K1 713 aa17.65■□□□□ 0.42
VEGFA-219ENST00000518824 RRP7AQ9Y3A4 280 aaKnown RBP17.65■□□□□ 0.42
VEGFA-219ENST00000518824 HEG1Q9ULI3 1381 aa17.65■□□□□ 0.42
VEGFA-219ENST00000518824 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
VEGFA-219ENST00000518824 NLGN2Q8NFZ4 835 aa17.64■□□□□ 0.41
VEGFA-219ENST00000518824 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
VEGFA-219ENST00000518824 VSIG10Q8N0Z9 540 aa17.63■□□□□ 0.41
VEGFA-219ENST00000518824 SOS1Q07889 1333 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-219ENST00000518824 NEFMP07197 916 aa17.62■□□□□ 0.41
VEGFA-219ENST00000518824 GYS1P13807 737 aa17.62■□□□□ 0.41
VEGFA-219ENST00000518824 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
VEGFA-219ENST00000518824 KDM3BQ7LBC6 1761 aa17.61■□□□□ 0.41
VEGFA-219ENST00000518824 ADRA2BP18089 450 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms