RNA–Protein interactions for RNA: ENST00000518789.5

ARFGEF1-205, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-205ENST00000518789 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
ARFGEF1-205ENST00000518789 SHANK3Q9BYB0 1731 aa13.27□□□□□ -0.28
ARFGEF1-205ENST00000518789 DUSP27Q5VZP5 1158 aa13.27□□□□□ -0.29
ARFGEF1-205ENST00000518789 TTC5Q8N0Z6 440 aa13.27□□□□□ -0.29
ARFGEF1-205ENST00000518789 MARCH10Q8NA82 808 aaPredicted RBP13.27□□□□□ -0.29
ARFGEF1-205ENST00000518789 NFATC2IPQ8NCF5 419 aa13.27□□□□□ -0.29
ARFGEF1-205ENST00000518789 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
ARFGEF1-205ENST00000518789 SOS1Q07889 1333 aaPredicted RBP13.26□□□□□ -0.29
ARFGEF1-205ENST00000518789 KRT27Q7Z3Y8 459 aa13.26□□□□□ -0.29
ARFGEF1-205ENST00000518789 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
ARFGEF1-205ENST00000518789 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
ARFGEF1-205ENST00000518789 KDM6AO15550 1401 aaPredicted RBP13.25□□□□□ -0.29
ARFGEF1-205ENST00000518789 FANCIQ9NVI1 1328 aa13.25□□□□□ -0.29
ARFGEF1-205ENST00000518789 FAM196AQ6ZSG2 479 aa13.25□□□□□ -0.29
ARFGEF1-205ENST00000518789 HMGB2P26583 209 aaKnown RBP13.24□□□□□ -0.29
ARFGEF1-205ENST00000518789 TSR2Q969E8 191 aaKnown RBP13.24□□□□□ -0.29
ARFGEF1-205ENST00000518789 SYTL4Q96C24 671 aaPredicted RBP13.24□□□□□ -0.29
ARFGEF1-205ENST00000518789 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
ARFGEF1-205ENST00000518789 ITGB4P16144 1822 aa13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 SIPA1L3O60292 1781 aaPredicted RBP13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 RGS17Q9UGC6 210 aaPredicted RBP13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 MRC1P22897 1456 aa13.23□□□□□ -0.29
ARFGEF1-205ENST00000518789 BCL9O00512 1426 aa13.22□□□□□ -0.29
ARFGEF1-205ENST00000518789 POTEAQ6S8J7 498 aa13.22□□□□□ -0.29
ARFGEF1-205ENST00000518789 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
ARFGEF1-205ENST00000518789 HOXB7P09629 217 aa13.21□□□□□ -0.29
ARFGEF1-205ENST00000518789 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.29
ARFGEF1-205ENST00000518789 PIGBQ92521 554 aa13.21□□□□□ -0.29
ARFGEF1-205ENST00000518789 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
ARFGEF1-205ENST00000518789 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
ARFGEF1-205ENST00000518789 BRWD3Q6RI45 1802 aa13.2□□□□□ -0.3
ARFGEF1-205ENST00000518789 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
ARFGEF1-205ENST00000518789 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
ARFGEF1-205ENST00000518789 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.2□□□□□ -0.3
ARFGEF1-205ENST00000518789 ACSBG1Q96GR2 724 aa13.2□□□□□ -0.3
ARFGEF1-205ENST00000518789 CACNA1FO60840 1977 aa13.2□□□□□ -0.3
ARFGEF1-205ENST00000518789 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
ARFGEF1-205ENST00000518789 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
ARFGEF1-205ENST00000518789 ALDH1L2Q3SY69 923 aa13.19□□□□□ -0.3
ARFGEF1-205ENST00000518789 VAMP4O75379 141 aa13.18□□□□□ -0.3
ARFGEF1-205ENST00000518789 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
ARFGEF1-205ENST00000518789 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
ARFGEF1-205ENST00000518789 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
ARFGEF1-205ENST00000518789 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
ARFGEF1-205ENST00000518789 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
ARFGEF1-205ENST00000518789 TOGARAM1Q9Y4F4 1720 aa13.17□□□□□ -0.3
ARFGEF1-205ENST00000518789 ELL2O00472 640 aaPredicted RBP13.17□□□□□ -0.3
ARFGEF1-205ENST00000518789 C8orf58Q8NAV2 365 aa13.17□□□□□ -0.3
ARFGEF1-205ENST00000518789 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
ARFGEF1-205ENST00000518789 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
ARFGEF1-205ENST00000518789 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
ARFGEF1-205ENST00000518789 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
ARFGEF1-205ENST00000518789 ATG3Q9NT62 314 aa13.16□□□□□ -0.3
ARFGEF1-205ENST00000518789 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
ARFGEF1-205ENST00000518789 RGS12O14924 1447 aa13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 KCNQ3O43525 872 aa13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 KCNQ2O43526 872 aa13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 PTCD1O75127 700 aaKnown RBP13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 STARD3NLO95772 234 aa13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 MS4A1P11836 297 aa13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 FAM182BQ5T319 152 aa13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 ZNF496Q96IT1 587 aaPredicted RBP13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
ARFGEF1-205ENST00000518789 NHSQ6T4R5 1651 aa13.15□□□□□ -0.31
ARFGEF1-205ENST00000518789 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
ARFGEF1-205ENST00000518789 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
ARFGEF1-205ENST00000518789 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
ARFGEF1-205ENST00000518789 TSPYL6Q8N831 410 aa13.14□□□□□ -0.31
ARFGEF1-205ENST00000518789 SMC4Q9NTJ3 1288 aa13.14□□□□□ -0.31
ARFGEF1-205ENST00000518789 NPM2Q86SE8 214 aaKnown RBP13.13□□□□□ -0.31
ARFGEF1-205ENST00000518789 DBF4Q9UBU7 674 aaPredicted RBP13.13□□□□□ -0.31
ARFGEF1-205ENST00000518789 PAPPAQ13219 1627 aa13.13□□□□□ -0.31
ARFGEF1-205ENST00000518789 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
ARFGEF1-205ENST00000518789 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
ARFGEF1-205ENST00000518789 UBR2Q8IWV8 1755 aa13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 PALLDQ8WX93 1383 aa13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 BTAF1O14981 1849 aa13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 TRIM37O94972 964 aa13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 NEFLP07196 543 aa13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 BRPF1P55201 1214 aaPredicted RBP13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 SF3B2Q13435 895 aaKnown RBP13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
ARFGEF1-205ENST00000518789 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
ARFGEF1-205ENST00000518789 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
ARFGEF1-205ENST00000518789 SIK1P57059 783 aa13.11□□□□□ -0.31
ARFGEF1-205ENST00000518789 KRT24Q2M2I5 525 aa13.11□□□□□ -0.31
ARFGEF1-205ENST00000518789 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
ARFGEF1-205ENST00000518789 HYPKQ9NX55 129 aa13.11□□□□□ -0.31
ARFGEF1-205ENST00000518789 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
ARFGEF1-205ENST00000518789 CCDC125Q86Z20 511 aa13.1□□□□□ -0.31
ARFGEF1-205ENST00000518789 ARHGAP45Q92619 1136 aa13.1□□□□□ -0.31
ARFGEF1-205ENST00000518789 DDX21Q9NR30 783 aaKnown RBP eCLIP13.1□□□□□ -0.31
ARFGEF1-205ENST00000518789 KCPQ6ZWJ8 1503 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms