RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-208ENST00000518711 TGFB2P61812 414 aa8.04□□□□□ -1.12
SPIDR-208ENST00000518711 HDGFL2Q7Z4V5 671 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-208ENST00000518711 ZCRB1Q8TBF4 217 aaKnown RBP8.04□□□□□ -1.12
SPIDR-208ENST00000518711 CCNL1Q9UK58 526 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-208ENST00000518711 PASKQ96RG2 1323 aa8.03□□□□□ -1.12
SPIDR-208ENST00000518711 EDC4Q6P2E9 1401 aaKnown RBP8.03□□□□□ -1.12
SPIDR-208ENST00000518711 MEGF6O75095 1541 aa8.03□□□□□ -1.12
SPIDR-208ENST00000518711 NSD2O96028 1365 aa8.03□□□□□ -1.12
SPIDR-208ENST00000518711 POTECB2RU33 542 aa8.03□□□□□ -1.12
SPIDR-208ENST00000518711 SOX12O15370 315 aa8.03□□□□□ -1.12
SPIDR-208ENST00000518711 DDX54Q8TDD1 881 aaKnown RBP8.03□□□□□ -1.12
SPIDR-208ENST00000518711 L3MBTL2Q969R5 705 aa8.03□□□□□ -1.12
SPIDR-208ENST00000518711 USP47Q96K76 1375 aa8.02□□□□□ -1.13
SPIDR-208ENST00000518711 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.02□□□□□ -1.13
SPIDR-208ENST00000518711 SMARCC1Q92922 1105 aaPredicted RBP8.02□□□□□ -1.13
SPIDR-208ENST00000518711 LY75O60449 1722 aa8.02□□□□□ -1.13
SPIDR-208ENST00000518711 NSD3Q9BZ95 1437 aa8.02□□□□□ -1.13
SPIDR-208ENST00000518711 ROCK2O75116 1388 aaKnown RBP8.01□□□□□ -1.13
SPIDR-208ENST00000518711 CASP8AP2Q9UKL3 1982 aa8.01□□□□□ -1.13
SPIDR-208ENST00000518711 NME9Q86XW9 330 aa8.01□□□□□ -1.13
SPIDR-208ENST00000518711 COL25A1Q9BXS0 654 aaPredicted RBP8.01□□□□□ -1.13
SPIDR-208ENST00000518711 FAM208AQ9UK61 1670 aaKnown RBP8.01□□□□□ -1.13
SPIDR-208ENST00000518711 MON2Q7Z3U7 1717 aa8□□□□□ -1.13
SPIDR-208ENST00000518711 CD163L1Q9NR16 1453 aa8□□□□□ -1.13
SPIDR-208ENST00000518711 CA12O43570 354 aa8□□□□□ -1.13
SPIDR-208ENST00000518711 POTEIP0CG38 1075 aa8□□□□□ -1.13
SPIDR-208ENST00000518711 POTEJP0CG39 1038 aa8□□□□□ -1.13
SPIDR-208ENST00000518711 DPEP1P16444 411 aa8□□□□□ -1.13
SPIDR-208ENST00000518711 SMIM5Q71RC9 77 aa8□□□□□ -1.13
SPIDR-208ENST00000518711 SYTL4Q96C24 671 aaPredicted RBP8□□□□□ -1.13
SPIDR-208ENST00000518711 GPR101Q96P66 508 aaPredicted RBP8□□□□□ -1.13
SPIDR-208ENST00000518711 RTL1A6NKG5 1358 aa7.99□□□□□ -1.13
SPIDR-208ENST00000518711 KIF24Q5T7B8 1368 aa7.99□□□□□ -1.13
SPIDR-208ENST00000518711 SSFA2P28290 1259 aa7.99□□□□□ -1.13
SPIDR-208ENST00000518711 HOXC9P31274 260 aa7.99□□□□□ -1.13
SPIDR-208ENST00000518711 COG3Q96JB2 828 aa7.99□□□□□ -1.13
SPIDR-208ENST00000518711 DCAF5Q96JK2 942 aa7.99□□□□□ -1.13
SPIDR-208ENST00000518711 SLC12A5Q9H2X9 1139 aa7.99□□□□□ -1.13
SPIDR-208ENST00000518711 PRDM6Q9NQX0 595 aa7.99□□□□□ -1.13
SPIDR-208ENST00000518711 LTN1O94822 1766 aa7.98□□□□□ -1.13
SPIDR-208ENST00000518711 NKX1-1Q15270 411 aaPredicted RBP7.98□□□□□ -1.13
SPIDR-208ENST00000518711 DPY19L2Q6NUT2 758 aa7.98□□□□□ -1.13
SPIDR-208ENST00000518711 RAPGEF4Q8WZA2 1011 aa7.98□□□□□ -1.13
SPIDR-208ENST00000518711 CAPNS2Q96L46 248 aa7.98□□□□□ -1.13
SPIDR-208ENST00000518711 COLQQ9Y215 455 aaPredicted RBP7.98□□□□□ -1.13
SPIDR-208ENST00000518711 MAP3K19Q56UN5 1328 aa7.98□□□□□ -1.13
SPIDR-208ENST00000518711 PCDH11XQ9BZA7 1347 aa7.98□□□□□ -1.13
SPIDR-208ENST00000518711 PCDH11YQ9BZA8 1340 aa7.98□□□□□ -1.13
SPIDR-208ENST00000518711 ITGBL1O95965 494 aaPredicted RBP7.97□□□□□ -1.13
SPIDR-208ENST00000518711 COL9A1P20849 921 aa7.97□□□□□ -1.13
SPIDR-208ENST00000518711 ECE1P42892 770 aa7.97□□□□□ -1.13
SPIDR-208ENST00000518711 AMPHP49418 695 aa7.97□□□□□ -1.13
SPIDR-208ENST00000518711 TMC1Q8TDI8 760 aa7.97□□□□□ -1.13
SPIDR-208ENST00000518711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.97□□□□□ -1.13
SPIDR-208ENST00000518711 ABT1Q9ULW3 272 aaKnown RBP7.97□□□□□ -1.13
SPIDR-208ENST00000518711 TATP17735 454 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-208ENST00000518711 GRM1Q13255 1194 aa7.96□□□□□ -1.14
SPIDR-208ENST00000518711 DALRD3Q5D0E6 543 aaKnown RBP7.96□□□□□ -1.14
SPIDR-208ENST00000518711 NBPF6Q5VWK0 638 aa7.96□□□□□ -1.14
SPIDR-208ENST00000518711 PAXIP1Q6ZW49 1069 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-208ENST00000518711 SNX27Q96L92 541 aa7.96□□□□□ -1.14
SPIDR-208ENST00000518711 NBPF4Q96M43 638 aa7.96□□□□□ -1.14
SPIDR-208ENST00000518711 PIM2Q9P1W9 311 aa7.96□□□□□ -1.14
SPIDR-208ENST00000518711 N4BP2Q86UW6 1770 aaPredicted RBP7.96□□□□□ -1.14
SPIDR-208ENST00000518711 A0A1W2PP64 1363 aa7.96□□□□□ -1.14
SPIDR-208ENST00000518711 PALLDQ8WX93 1383 aa7.96□□□□□ -1.14
SPIDR-208ENST00000518711 LTBP1Q14766 1721 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.95□□□□□ -1.14
SPIDR-208ENST00000518711 LMNB1P20700 586 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 KCNA3P22001 575 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 MAP2K2P36507 400 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 PLA2G5P39877 138 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 LDHDQ86WU2 507 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 NLGN1Q8N2Q7 840 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 AK7Q96M32 723 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 CACNA1AO00555 2505 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 INSRP06213 1382 aa7.95□□□□□ -1.14
SPIDR-208ENST00000518711 SMG6Q86US8 1419 aaKnown RBP7.95□□□□□ -1.14
SPIDR-208ENST00000518711 SZT2Q5T011 3432 aa7.94□□□□□ -1.14
SPIDR-208ENST00000518711 SBF1O95248 1867 aa7.94□□□□□ -1.14
SPIDR-208ENST00000518711 LTV1Q96GA3 475 aaPredicted RBP7.94□□□□□ -1.14
SPIDR-208ENST00000518711 CARD11Q9BXL7 1154 aa7.94□□□□□ -1.14
SPIDR-208ENST00000518711 COL6A3P12111 3177 aa7.94□□□□□ -1.14
SPIDR-208ENST00000518711 KIAA1551Q9HCM1 1747 aa7.94□□□□□ -1.14
SPIDR-208ENST00000518711 TAF1LQ8IZX4 1826 aa7.94□□□□□ -1.14
SPIDR-208ENST00000518711 THSD7BQ9C0I4 1608 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 C5P01031 1676 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 DOT1LQ8TEK3 1739 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 LOC102724428A0A0B4J2F2 783 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 FYB1O15117 783 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 CYP27B1O15528 508 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 MMP10P09238 476 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 SIK1P57059 783 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 RC3H1Q5TC82 1133 aaKnown RBP7.93□□□□□ -1.14
SPIDR-208ENST00000518711 CYP4F22Q6NT55 531 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 MPRIPQ6WCQ1 1025 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 PIGBQ92521 554 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 FAM122AQ96E09 287 aa7.93□□□□□ -1.14
SPIDR-208ENST00000518711 KDM6AO15550 1401 aaPredicted RBP7.93□□□□□ -1.14
SPIDR-208ENST00000518711 TRIOBPQ9H2D6 2365 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms