RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
CCDC6-203ENST00000518638 CDK11AQ9UQ88 783 aaPredicted RBP10.21□□□□□ -0.77
CCDC6-203ENST00000518638 KIF14Q15058 1648 aa10.21□□□□□ -0.78
CCDC6-203ENST00000518638 CAMSAP1Q5T5Y3 1602 aa10.21□□□□□ -0.78
CCDC6-203ENST00000518638 IRS1P35568 1242 aa10.2□□□□□ -0.78
CCDC6-203ENST00000518638 FOXK2Q01167 660 aa10.2□□□□□ -0.78
CCDC6-203ENST00000518638 PLA2R1Q13018 1463 aa10.2□□□□□ -0.78
CCDC6-203ENST00000518638 MED1Q15648 1581 aaPredicted RBP10.2□□□□□ -0.78
CCDC6-203ENST00000518638 MLH3Q9UHC1 1453 aa10.2□□□□□ -0.78
CCDC6-203ENST00000518638 ARHGAP5Q13017 1502 aa10.19□□□□□ -0.78
CCDC6-203ENST00000518638 CDK13Q14004 1512 aaKnown RBP10.19□□□□□ -0.78
CCDC6-203ENST00000518638 GRM5P41594 1212 aa10.19□□□□□ -0.78
CCDC6-203ENST00000518638 TSEN34Q9BSV6 310 aaKnown RBP10.19□□□□□ -0.78
CCDC6-203ENST00000518638 PCDHB15Q9Y5E8 787 aa10.19□□□□□ -0.78
CCDC6-203ENST00000518638 ZNF142P52746 1687 aaPredicted RBP10.18□□□□□ -0.78
CCDC6-203ENST00000518638 CLIP1P30622 1438 aa10.18□□□□□ -0.78
CCDC6-203ENST00000518638 AGERQ15109 404 aa10.18□□□□□ -0.78
CCDC6-203ENST00000518638 KANK3Q6NY19 840 aa10.18□□□□□ -0.78
CCDC6-203ENST00000518638 LYPD8Q6UX82 237 aa10.18□□□□□ -0.78
CCDC6-203ENST00000518638 NANOS1Q8WY41 292 aaKnown RBP10.18□□□□□ -0.78
CCDC6-203ENST00000518638 SUPT6HQ7KZ85 1726 aaKnown RBP10.18□□□□□ -0.78
CCDC6-203ENST00000518638 ABCA6Q8N139 1617 aa10.18□□□□□ -0.78
CCDC6-203ENST00000518638 EEA1Q15075 1411 aa10.17□□□□□ -0.78
CCDC6-203ENST00000518638 PTSQ03393 145 aa10.17□□□□□ -0.78
CCDC6-203ENST00000518638 TMEM132AQ24JP5 1023 aa10.17□□□□□ -0.78
CCDC6-203ENST00000518638 PRPF38BQ5VTL8 546 aaKnown RBP10.17□□□□□ -0.78
CCDC6-203ENST00000518638 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC6-203ENST00000518638 BPHLQ86WA6 291 aaPredicted RBP10.16□□□□□ -0.78
CCDC6-203ENST00000518638 PROCA1Q8NCQ7 364 aaPredicted RBP10.16□□□□□ -0.78
CCDC6-203ENST00000518638 PCMTD1Q96MG8 357 aaPredicted RBP10.16□□□□□ -0.78
CCDC6-203ENST00000518638 ZBTB3Q9H5J0 574 aa10.16□□□□□ -0.78
CCDC6-203ENST00000518638 FMN1Q68DA7 1419 aa10.16□□□□□ -0.78
CCDC6-203ENST00000518638 ZNF335Q9H4Z2 1342 aaPredicted RBP10.15□□□□□ -0.78
CCDC6-203ENST00000518638 TTLL8A6PVC2 850 aa10.15□□□□□ -0.78
CCDC6-203ENST00000518638 HRCP23327 699 aa10.15□□□□□ -0.78
CCDC6-203ENST00000518638 MARSP56192 900 aaKnown RBP10.15□□□□□ -0.78
CCDC6-203ENST00000518638 CSPP1Q1MSJ5 1256 aa10.15□□□□□ -0.78
CCDC6-203ENST00000518638 RNFT1Q5M7Z0 435 aa10.15□□□□□ -0.78
CCDC6-203ENST00000518638 MAP10Q9P2G4 905 aa10.15□□□□□ -0.78
CCDC6-203ENST00000518638 CPS1P31327 1500 aa10.14□□□□□ -0.79
CCDC6-203ENST00000518638 TOM1O60784 492 aa10.14□□□□□ -0.79
CCDC6-203ENST00000518638 LILRB3O75022 631 aa10.14□□□□□ -0.79
CCDC6-203ENST00000518638 SLURP2P0DP57 97 aa10.14□□□□□ -0.79
CCDC6-203ENST00000518638 QPCTQ16769 361 aa10.14□□□□□ -0.79
CCDC6-203ENST00000518638 C4orf48Q5BLP8 95 aa10.14□□□□□ -0.79
CCDC6-203ENST00000518638 TCOF1Q13428 1488 aaKnown RBP10.14□□□□□ -0.79
CCDC6-203ENST00000518638 MYO3AQ8NEV4 1616 aa10.14□□□□□ -0.79
CCDC6-203ENST00000518638 CEP170BQ9Y4F5 1589 aaPredicted RBP10.14□□□□□ -0.79
CCDC6-203ENST00000518638 ABCC1P33527 1531 aa10.13□□□□□ -0.79
CCDC6-203ENST00000518638 ARHGEF15O94989 841 aa10.13□□□□□ -0.79
CCDC6-203ENST00000518638 F12P00748 615 aaPredicted RBP10.13□□□□□ -0.79
CCDC6-203ENST00000518638 FSHRP23945 695 aa10.13□□□□□ -0.79
CCDC6-203ENST00000518638 AFAP1Q8N556 730 aa10.13□□□□□ -0.79
CCDC6-203ENST00000518638 CABLES1Q8TDN4 633 aa10.13□□□□□ -0.79
CCDC6-203ENST00000518638 WHAMMQ8TF30 809 aa10.13□□□□□ -0.79
CCDC6-203ENST00000518638 SCARF2Q96GP6 870 aaPredicted RBP10.13□□□□□ -0.79
CCDC6-203ENST00000518638 TROQ12816 1431 aaPredicted RBP10.13□□□□□ -0.79
CCDC6-203ENST00000518638 ITSN2Q9NZM3 1697 aa10.12□□□□□ -0.79
CCDC6-203ENST00000518638 PREX2Q70Z35 1606 aa10.12□□□□□ -0.79
CCDC6-203ENST00000518638 CCDC155Q8N6L0 562 aa10.12□□□□□ -0.79
CCDC6-203ENST00000518638 EMILIN1Q9Y6C2 1016 aa10.12□□□□□ -0.79
CCDC6-203ENST00000518638 KIDINS220Q9ULH0 1771 aa10.11□□□□□ -0.79
CCDC6-203ENST00000518638 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
CCDC6-203ENST00000518638 RANGAP1P46060 587 aaPredicted RBP10.11□□□□□ -0.79
CCDC6-203ENST00000518638 XP32Q5T750 250 aa10.11□□□□□ -0.79
CCDC6-203ENST00000518638 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
CCDC6-203ENST00000518638 ATP1B4Q9UN42 357 aaPredicted RBP10.11□□□□□ -0.79
CCDC6-203ENST00000518638 MAP4K5Q9Y4K4 846 aa10.11□□□□□ -0.79
CCDC6-203ENST00000518638 ZMYM3Q14202 1370 aa10.11□□□□□ -0.79
CCDC6-203ENST00000518638 PTPRKQ15262 1439 aa10.1□□□□□ -0.79
CCDC6-203ENST00000518638 NUTM2BA6NNL0 878 aaPredicted RBP10.1□□□□□ -0.79
CCDC6-203ENST00000518638 NUTM2EB1AL46 878 aaPredicted RBP10.1□□□□□ -0.79
CCDC6-203ENST00000518638 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
CCDC6-203ENST00000518638 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
CCDC6-203ENST00000518638 C1QTNF2Q9BXJ5 285 aa10.1□□□□□ -0.79
CCDC6-203ENST00000518638 FIGNL2A6NMB9 653 aa10.09□□□□□ -0.79
CCDC6-203ENST00000518638 CFAP99D6REC4 459 aa10.09□□□□□ -0.79
CCDC6-203ENST00000518638 HSPA1LP34931 641 aa10.09□□□□□ -0.79
CCDC6-203ENST00000518638 RTL5Q5HYW3 569 aaPredicted RBP10.09□□□□□ -0.79
CCDC6-203ENST00000518638 FBXO31Q5XUX0 539 aaPredicted RBP10.09□□□□□ -0.79
CCDC6-203ENST00000518638 POLR1AO95602 1720 aaPredicted RBP10.09□□□□□ -0.79
CCDC6-203ENST00000518638 VASH1Q7L8A9 365 aaPredicted RBP10.08□□□□□ -0.8
CCDC6-203ENST00000518638 CCDC116Q8IYX3 515 aa10.08□□□□□ -0.8
CCDC6-203ENST00000518638 CLTCQ00610 1675 aaKnown RBP10.08□□□□□ -0.8
CCDC6-203ENST00000518638 CDC14CA4D256 554 aa10.07□□□□□ -0.8
CCDC6-203ENST00000518638 ITGA6P23229 1130 aa10.07□□□□□ -0.8
CCDC6-203ENST00000518638 PIP4K2BP78356 416 aa10.07□□□□□ -0.8
CCDC6-203ENST00000518638 SV2AQ7L0J3 742 aa10.07□□□□□ -0.8
CCDC6-203ENST00000518638 VWA5B2Q8N398 1253 aa10.07□□□□□ -0.8
CCDC6-203ENST00000518638 A2ML1A8K2U0 1454 aa10.06□□□□□ -0.8
CCDC6-203ENST00000518638 SLC35F4A4IF30 521 aa10.06□□□□□ -0.8
CCDC6-203ENST00000518638 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
CCDC6-203ENST00000518638 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
CCDC6-203ENST00000518638 CCDC18Q5T9S5 1454 aa10.05□□□□□ -0.8
CCDC6-203ENST00000518638 SHANK2Q9UPX8 1470 aa10.05□□□□□ -0.8
CCDC6-203ENST00000518638 SPINT1O43278 529 aa10.05□□□□□ -0.8
CCDC6-203ENST00000518638 RFC5P40937 340 aa10.05□□□□□ -0.8
CCDC6-203ENST00000518638 TRMT44Q8IYL2 757 aaKnown RBP10.05□□□□□ -0.8
CCDC6-203ENST00000518638 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
CCDC6-203ENST00000518638 DNMT1P26358 1616 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms