RNA–Protein interactions for RNA: ENST00000518628.1

GPAT4-202, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

TSL 3

Gene GPAT4, Length 1,063 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-202ENST00000518628 LINC00116Q8NCU8 138 aa23.52■■□□□ 1.36
GPAT4-202ENST00000518628 KDM6AO15550 1401 aaPredicted RBP23.51■■□□□ 1.35
GPAT4-202ENST00000518628 DIAPH1O60610 1272 aaKnown RBP23.51■■□□□ 1.35
GPAT4-202ENST00000518628 SSFA2P28290 1259 aa23.5■■□□□ 1.35
GPAT4-202ENST00000518628 ITPK1Q13572 414 aa23.5■■□□□ 1.35
GPAT4-202ENST00000518628 KLHL34Q8N239 644 aa23.49■■□□□ 1.35
GPAT4-202ENST00000518628 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.48■■□□□ 1.35
GPAT4-202ENST00000518628 AKAP4Q5JQC9 854 aa23.48■■□□□ 1.35
GPAT4-202ENST00000518628 MSL1Q68DK7 614 aa23.48■■□□□ 1.35
GPAT4-202ENST00000518628 AMIGO3Q86WK7 504 aa23.48■■□□□ 1.35
GPAT4-202ENST00000518628 PHF14O94880 888 aa23.47■■□□□ 1.35
GPAT4-202ENST00000518628 RBM42Q9BTD8 480 aaKnown RBP23.47■■□□□ 1.35
GPAT4-202ENST00000518628 HMOX1P09601 288 aa23.46■■□□□ 1.35
GPAT4-202ENST00000518628 UBR3Q6ZT12 1888 aa23.45■■□□□ 1.35
GPAT4-202ENST00000518628 GNPATO15228 680 aa23.45■■□□□ 1.34
GPAT4-202ENST00000518628 NFATC2IPQ8NCF5 419 aa23.45■■□□□ 1.34
GPAT4-202ENST00000518628 SLC4A9Q96Q91 983 aa23.45■■□□□ 1.34
GPAT4-202ENST00000518628 CNGB1Q14028 1251 aaPredicted RBP23.44■■□□□ 1.34
GPAT4-202ENST00000518628 ZNF831Q5JPB2 1677 aa23.44■■□□□ 1.34
GPAT4-202ENST00000518628 GPR162Q16538 588 aa23.43■■□□□ 1.34
GPAT4-202ENST00000518628 RC3H1Q5TC82 1133 aaKnown RBP23.43■■□□□ 1.34
GPAT4-202ENST00000518628 SMIM5Q71RC9 77 aa23.43■■□□□ 1.34
GPAT4-202ENST00000518628 NLGN2Q8NFZ4 835 aa23.42■■□□□ 1.34
GPAT4-202ENST00000518628 MTHFSDQ2M296 383 aaKnown RBP23.41■■□□□ 1.34
GPAT4-202ENST00000518628 RTCBQ9Y3I0 505 aaKnown RBP23.41■■□□□ 1.34
GPAT4-202ENST00000518628 CD2APQ9Y5K6 639 aa23.41■■□□□ 1.34
GPAT4-202ENST00000518628 CNTNAP4Q9C0A0 1308 aa23.4■■□□□ 1.34
GPAT4-202ENST00000518628 TRAPPC3LQ5T215 181 aa23.4■■□□□ 1.34
GPAT4-202ENST00000518628 COL3A1P02461 1466 aaPredicted RBP23.4■■□□□ 1.34
GPAT4-202ENST00000518628 SLC52A2Q9HAB3 445 aa23.39■■□□□ 1.33
GPAT4-202ENST00000518628 LGR6Q9HBX8 967 aa23.39■■□□□ 1.33
GPAT4-202ENST00000518628 U2SURPO15042 1029 aaKnown RBP23.38■■□□□ 1.33
GPAT4-202ENST00000518628 RNMTO43148 476 aaKnown RBP23.38■■□□□ 1.33
GPAT4-202ENST00000518628 PTCD1O75127 700 aaKnown RBP23.38■■□□□ 1.33
GPAT4-202ENST00000518628 ADRA2BP18089 450 aa23.38■■□□□ 1.33
GPAT4-202ENST00000518628 SCN11AQ9UI33 1791 aa23.37■■□□□ 1.33
GPAT4-202ENST00000518628 RPS6KA4O75676 772 aa23.37■■□□□ 1.33
GPAT4-202ENST00000518628 CFAP53Q96M91 514 aa23.37■■□□□ 1.33
GPAT4-202ENST00000518628 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
GPAT4-202ENST00000518628 ARHGEF1Q92888 912 aaKnown RBP23.35■■□□□ 1.33
GPAT4-202ENST00000518628 COL5A3P25940 1745 aaPredicted RBP23.35■■□□□ 1.33
GPAT4-202ENST00000518628 MRC1P22897 1456 aa23.33■■□□□ 1.33
GPAT4-202ENST00000518628 GRIN3BO60391 1043 aa23.33■■□□□ 1.33
GPAT4-202ENST00000518628 NLGN1Q8N2Q7 840 aa23.33■■□□□ 1.33
GPAT4-202ENST00000518628 RFC4P35249 363 aa23.32■■□□□ 1.32
GPAT4-202ENST00000518628 GAS2L2Q8NHY3 880 aa23.32■■□□□ 1.32
GPAT4-202ENST00000518628 UTRNP46939 3433 aa23.31■■□□□ 1.32
GPAT4-202ENST00000518628 PPP2R1AP30153 589 aa23.31■■□□□ 1.32
GPAT4-202ENST00000518628 CRKLP46109 303 aaKnown RBP23.31■■□□□ 1.32
GPAT4-202ENST00000518628 NUDCQ9Y266 331 aa23.31■■□□□ 1.32
GPAT4-202ENST00000518628 ADAMTS7Q9UKP4 1686 aa23.31■■□□□ 1.32
GPAT4-202ENST00000518628 CICQ96RK0 1608 aaPredicted RBP23.3■■□□□ 1.32
GPAT4-202ENST00000518628 YBX3P16989 372 aaKnown RBP eCLIP23.3■■□□□ 1.32
GPAT4-202ENST00000518628 CHD4Q14839 1912 aa23.29■■□□□ 1.32
GPAT4-202ENST00000518628 MMP10P09238 476 aa23.29■■□□□ 1.32
GPAT4-202ENST00000518628 GNAT3A8MTJ3 354 aa23.28■■□□□ 1.32
GPAT4-202ENST00000518628 GYS1P13807 737 aa23.28■■□□□ 1.32
GPAT4-202ENST00000518628 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
GPAT4-202ENST00000518628 ZNF784Q8NCA9 323 aaPredicted RBP23.28■■□□□ 1.32
GPAT4-202ENST00000518628 INTS5Q6P9B9 1019 aaKnown RBP23.27■■□□□ 1.32
GPAT4-202ENST00000518628 DNAJC10Q8IXB1 793 aa23.27■■□□□ 1.32
GPAT4-202ENST00000518628 VSIG10Q8N0Z9 540 aa23.27■■□□□ 1.32
GPAT4-202ENST00000518628 TJP1Q07157 1748 aa23.27■■□□□ 1.32
GPAT4-202ENST00000518628 IL17REQ8NFR9 667 aa23.26■■□□□ 1.31
GPAT4-202ENST00000518628 RSPH6AQ9H0K4 717 aa23.26■■□□□ 1.31
GPAT4-202ENST00000518628 MYH14Q7Z406 1995 aaKnown RBP23.26■■□□□ 1.31
GPAT4-202ENST00000518628 PRKAR2BP31323 418 aa23.25■■□□□ 1.31
GPAT4-202ENST00000518628 CCDC87Q9NVE4 849 aa23.25■■□□□ 1.31
GPAT4-202ENST00000518628 CYP19A1P11511 503 aaPredicted RBP23.24■■□□□ 1.31
GPAT4-202ENST00000518628 TEFQ10587 303 aa23.24■■□□□ 1.31
GPAT4-202ENST00000518628 PHACTR3Q96KR7 559 aa23.24■■□□□ 1.31
GPAT4-202ENST00000518628 VIRMAQ69YN4 1812 aaKnown RBP23.24■■□□□ 1.31
GPAT4-202ENST00000518628 KCPQ6ZWJ8 1503 aa23.23■■□□□ 1.31
GPAT4-202ENST00000518628 FCHSD2O94868 740 aa23.23■■□□□ 1.31
GPAT4-202ENST00000518628 U2AF1L5P0DN76 240 aaPredicted RBP23.23■■□□□ 1.31
GPAT4-202ENST00000518628 U2AF1Q01081 240 aaKnown RBP eCLIP23.23■■□□□ 1.31
GPAT4-202ENST00000518628 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
GPAT4-202ENST00000518628 PARP3Q9Y6F1 533 aa23.22■■□□□ 1.31
GPAT4-202ENST00000518628 USP42Q9H9J4 1324 aaKnown RBP23.22■■□□□ 1.31
GPAT4-202ENST00000518628 TGFB2P61812 414 aa23.21■■□□□ 1.31
GPAT4-202ENST00000518628 C4AP0C0L4 1744 aa23.2■■□□□ 1.3
GPAT4-202ENST00000518628 SOS1Q07889 1333 aaPredicted RBP23.2■■□□□ 1.3
GPAT4-202ENST00000518628 SRP68Q9UHB9 627 aaKnown RBP23.2■■□□□ 1.3
GPAT4-202ENST00000518628 CEMIPQ8WUJ3 1361 aa23.19■■□□□ 1.3
GPAT4-202ENST00000518628 ZNF790Q6PG37 636 aa23.19■■□□□ 1.3
GPAT4-202ENST00000518628 ZPR1O75312 459 aa23.18■■□□□ 1.3
GPAT4-202ENST00000518628 FKBP8Q14318 412 aa23.18■■□□□ 1.3
GPAT4-202ENST00000518628 C10orf71Q711Q0 1435 aa23.17■■□□□ 1.3
GPAT4-202ENST00000518628 TEX13AQ9BXU3 409 aaPredicted RBP23.17■■□□□ 1.3
GPAT4-202ENST00000518628 ZBTB1Q9Y2K1 713 aa23.17■■□□□ 1.3
GPAT4-202ENST00000518628 UBR2Q8IWV8 1755 aa23.17■■□□□ 1.3
GPAT4-202ENST00000518628 STARD3NLO95772 234 aa23.16■■□□□ 1.3
GPAT4-202ENST00000518628 ZNF496Q96IT1 587 aaPredicted RBP23.16■■□□□ 1.3
GPAT4-202ENST00000518628 KIF13BQ9NQT8 1826 aa23.16■■□□□ 1.3
GPAT4-202ENST00000518628 USPL1Q5W0Q7 1092 aa23.15■■□□□ 1.3
GPAT4-202ENST00000518628 RTF1Q92541 710 aaKnown RBP23.15■■□□□ 1.3
GPAT4-202ENST00000518628 NARFQ9UHQ1 456 aa23.15■■□□□ 1.3
GPAT4-202ENST00000518628 PXDNLA1KZ92 1463 aa23.15■■□□□ 1.3
GPAT4-202ENST00000518628 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.3
GPAT4-202ENST00000518628 BTBD11A6QL63 1104 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms