RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 RBM42Q9BTD8 480 aaKnown RBP24.95■■□□□ 1.58
HOXA3-203ENST00000518451 SSFA2P28290 1259 aa24.93■■□□□ 1.58
HOXA3-203ENST00000518451 LINC00116Q8NCU8 138 aa24.93■■□□□ 1.58
HOXA3-203ENST00000518451 NUDCQ9Y266 331 aa24.93■■□□□ 1.58
HOXA3-203ENST00000518451 KDM6AO15550 1401 aaPredicted RBP24.93■■□□□ 1.58
HOXA3-203ENST00000518451 ITPK1Q13572 414 aa24.92■■□□□ 1.58
HOXA3-203ENST00000518451 MAP3K5Q99683 1374 aa24.92■■□□□ 1.58
HOXA3-203ENST00000518451 C5P01031 1676 aa24.91■■□□□ 1.58
HOXA3-203ENST00000518451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.9■■□□□ 1.58
HOXA3-203ENST00000518451 MTHFSDQ2M296 383 aaKnown RBP24.9■■□□□ 1.58
HOXA3-203ENST00000518451 GNPATO15228 680 aa24.89■■□□□ 1.58
HOXA3-203ENST00000518451 PHF14O94880 888 aa24.89■■□□□ 1.58
HOXA3-203ENST00000518451 PPP2R1AP30153 589 aa24.88■■□□□ 1.57
HOXA3-203ENST00000518451 RC3H1Q5TC82 1133 aaKnown RBP24.88■■□□□ 1.57
HOXA3-203ENST00000518451 KLHL34Q8N239 644 aa24.88■■□□□ 1.57
HOXA3-203ENST00000518451 SLC52A2Q9HAB3 445 aa24.88■■□□□ 1.57
HOXA3-203ENST00000518451 C4BP0C0L5 1744 aa24.88■■□□□ 1.57
HOXA3-203ENST00000518451 RNMTO43148 476 aaKnown RBP24.87■■□□□ 1.57
HOXA3-203ENST00000518451 PTCD1O75127 700 aaKnown RBP24.87■■□□□ 1.57
HOXA3-203ENST00000518451 GAS2L2Q8NHY3 880 aa24.87■■□□□ 1.57
HOXA3-203ENST00000518451 LGR6Q9HBX8 967 aa24.87■■□□□ 1.57
HOXA3-203ENST00000518451 RTCBQ9Y3I0 505 aaKnown RBP24.87■■□□□ 1.57
HOXA3-203ENST00000518451 MSL1Q68DK7 614 aa24.86■■□□□ 1.57
HOXA3-203ENST00000518451 TAF1LQ8IZX4 1826 aa24.86■■□□□ 1.57
HOXA3-203ENST00000518451 TRAPPC3LQ5T215 181 aa24.85■■□□□ 1.57
HOXA3-203ENST00000518451 SLC4A9Q96Q91 983 aa24.85■■□□□ 1.57
HOXA3-203ENST00000518451 TUBGCP6Q96RT7 1819 aa24.84■■□□□ 1.57
HOXA3-203ENST00000518451 COL3A1P02461 1466 aaPredicted RBP24.84■■□□□ 1.57
HOXA3-203ENST00000518451 ADRA2BP18089 450 aa24.83■■□□□ 1.57
HOXA3-203ENST00000518451 CNTNAP4Q9C0A0 1308 aa24.83■■□□□ 1.56
HOXA3-203ENST00000518451 GNAT3A8MTJ3 354 aa24.82■■□□□ 1.56
HOXA3-203ENST00000518451 AMIGO3Q86WK7 504 aa24.82■■□□□ 1.56
HOXA3-203ENST00000518451 RPS6KA4O75676 772 aa24.81■■□□□ 1.56
HOXA3-203ENST00000518451 U2AF1L5P0DN76 240 aaPredicted RBP24.81■■□□□ 1.56
HOXA3-203ENST00000518451 YY1P25490 414 aa24.81■■□□□ 1.56
HOXA3-203ENST00000518451 U2AF1Q01081 240 aaKnown RBP eCLIP24.81■■□□□ 1.56
HOXA3-203ENST00000518451 COL24A1Q17RW2 1714 aa24.81■■□□□ 1.56
HOXA3-203ENST00000518451 GPR162Q16538 588 aa24.8■■□□□ 1.56
HOXA3-203ENST00000518451 SMIM5Q71RC9 77 aa24.8■■□□□ 1.56
HOXA3-203ENST00000518451 CD2APQ9Y5K6 639 aa24.8■■□□□ 1.56
HOXA3-203ENST00000518451 ZNF831Q5JPB2 1677 aa24.79■■□□□ 1.56
HOXA3-203ENST00000518451 FCHSD2O94868 740 aa24.79■■□□□ 1.56
HOXA3-203ENST00000518451 PRKAR2BP31323 418 aa24.78■■□□□ 1.56
HOXA3-203ENST00000518451 RFC4P35249 363 aa24.78■■□□□ 1.56
HOXA3-203ENST00000518451 TEFQ10587 303 aa24.78■■□□□ 1.56
HOXA3-203ENST00000518451 NLGN1Q8N2Q7 840 aa24.78■■□□□ 1.56
HOXA3-203ENST00000518451 RSPH6AQ9H0K4 717 aa24.78■■□□□ 1.56
HOXA3-203ENST00000518451 ARHGEF1Q92888 912 aaKnown RBP24.77■■□□□ 1.56
HOXA3-203ENST00000518451 CRKLP46109 303 aaKnown RBP24.76■■□□□ 1.55
HOXA3-203ENST00000518451 SCN11AQ9UI33 1791 aa24.75■■□□□ 1.55
HOXA3-203ENST00000518451 UBR3Q6ZT12 1888 aa24.75■■□□□ 1.55
HOXA3-203ENST00000518451 SLC39A6Q13433 755 aa24.75■■□□□ 1.55
HOXA3-203ENST00000518451 TTC5Q8N0Z6 440 aa24.75■■□□□ 1.55
HOXA3-203ENST00000518451 VSIG10Q8N0Z9 540 aa24.75■■□□□ 1.55
HOXA3-203ENST00000518451 PHACTR3Q96KR7 559 aa24.75■■□□□ 1.55
HOXA3-203ENST00000518451 IL17REQ8NFR9 667 aa24.74■■□□□ 1.55
HOXA3-203ENST00000518451 NLGN2Q8NFZ4 835 aa24.74■■□□□ 1.55
HOXA3-203ENST00000518451 MRC1P22897 1456 aa24.73■■□□□ 1.55
HOXA3-203ENST00000518451 NEFMP07197 916 aa24.73■■□□□ 1.55
HOXA3-203ENST00000518451 PELP1Q8IZL8 1130 aaKnown RBP24.72■■□□□ 1.55
HOXA3-203ENST00000518451 RTF1Q92541 710 aaKnown RBP24.72■■□□□ 1.55
HOXA3-203ENST00000518451 RALBP1Q15311 655 aa24.71■■□□□ 1.55
HOXA3-203ENST00000518451 DNAJC10Q8IXB1 793 aa24.71■■□□□ 1.55
HOXA3-203ENST00000518451 CCDC87Q9NVE4 849 aa24.71■■□□□ 1.55
HOXA3-203ENST00000518451 GRIN3BO60391 1043 aa24.7■■□□□ 1.54
HOXA3-203ENST00000518451 MMP10P09238 476 aa24.7■■□□□ 1.54
HOXA3-203ENST00000518451 PNNQ9H307 717 aaKnown RBP24.7■■□□□ 1.54
HOXA3-203ENST00000518451 DDX10Q13206 875 aaKnown RBP24.69■■□□□ 1.54
HOXA3-203ENST00000518451 INTS5Q6P9B9 1019 aaKnown RBP24.69■■□□□ 1.54
HOXA3-203ENST00000518451 TEX13AQ9BXU3 409 aaPredicted RBP24.69■■□□□ 1.54
HOXA3-203ENST00000518451 HTATSF1O43719 755 aaKnown RBP24.68■■□□□ 1.54
HOXA3-203ENST00000518451 STARD3NLO95772 234 aa24.68■■□□□ 1.54
HOXA3-203ENST00000518451 CYP19A1P11511 503 aaPredicted RBP24.68■■□□□ 1.54
HOXA3-203ENST00000518451 GYS1P13807 737 aa24.68■■□□□ 1.54
HOXA3-203ENST00000518451 ZNF790Q6PG37 636 aa24.68■■□□□ 1.54
HOXA3-203ENST00000518451 ADAMTS7Q9UKP4 1686 aa24.67■■□□□ 1.54
HOXA3-203ENST00000518451 PARP3Q9Y6F1 533 aa24.66■■□□□ 1.54
HOXA3-203ENST00000518451 COL5A3P25940 1745 aaPredicted RBP24.66■■□□□ 1.54
HOXA3-203ENST00000518451 CEMIPQ8WUJ3 1361 aa24.66■■□□□ 1.54
HOXA3-203ENST00000518451 BTBD11A6QL63 1104 aa24.65■■□□□ 1.54
HOXA3-203ENST00000518451 ZPR1O75312 459 aa24.65■■□□□ 1.54
HOXA3-203ENST00000518451 FMNL2Q96PY5 1086 aa24.64■■□□□ 1.54
HOXA3-203ENST00000518451 ZNF496Q96IT1 587 aaPredicted RBP24.63■■□□□ 1.53
HOXA3-203ENST00000518451 USP42Q9H9J4 1324 aaKnown RBP24.62■■□□□ 1.53
HOXA3-203ENST00000518451 CICQ96RK0 1608 aaPredicted RBP24.62■■□□□ 1.53
HOXA3-203ENST00000518451 SOS1Q07889 1333 aaPredicted RBP24.61■■□□□ 1.53
HOXA3-203ENST00000518451 KCPQ6ZWJ8 1503 aa24.61■■□□□ 1.53
HOXA3-203ENST00000518451 ZEB1P37275 1124 aaPredicted RBP24.61■■□□□ 1.53
HOXA3-203ENST00000518451 HEG1Q9ULI3 1381 aa24.6■■□□□ 1.53
HOXA3-203ENST00000518451 TGFB2P61812 414 aa24.6■■□□□ 1.53
HOXA3-203ENST00000518451 MCM10Q7L590 875 aa24.6■■□□□ 1.53
HOXA3-203ENST00000518451 SRP68Q9UHB9 627 aaKnown RBP24.6■■□□□ 1.53
HOXA3-203ENST00000518451 MYH14Q7Z406 1995 aaKnown RBP24.6■■□□□ 1.53
HOXA3-203ENST00000518451 TJP1Q07157 1748 aa24.59■■□□□ 1.53
HOXA3-203ENST00000518451 YBX3P16989 372 aaKnown RBP eCLIP24.59■■□□□ 1.53
HOXA3-203ENST00000518451 ZBTB1Q9Y2K1 713 aa24.59■■□□□ 1.53
HOXA3-203ENST00000518451 A0A087WZG4 1122 aa24.58■■□□□ 1.53
HOXA3-203ENST00000518451 CANXP27824 592 aaKnown RBP24.58■■□□□ 1.53
HOXA3-203ENST00000518451 FKBP8Q14318 412 aa24.58■■□□□ 1.53
HOXA3-203ENST00000518451 NPM2Q86SE8 214 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms