RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 ERVV-2B6SEH9 535 aa14.27□□□□□ -0.13
SPIDR-205ENST00000518060 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
SPIDR-205ENST00000518060 LINC00116Q8NCU8 138 aa14.27□□□□□ -0.13
SPIDR-205ENST00000518060 FLAD1Q8NFF5 587 aa14.27□□□□□ -0.13
SPIDR-205ENST00000518060 QSER1Q2KHR3 1735 aa14.27□□□□□ -0.13
SPIDR-205ENST00000518060 GNPATO15228 680 aa14.26□□□□□ -0.13
SPIDR-205ENST00000518060 YY1P25490 414 aa14.26□□□□□ -0.13
SPIDR-205ENST00000518060 ITPK1Q13572 414 aa14.26□□□□□ -0.13
SPIDR-205ENST00000518060 SMIM5Q71RC9 77 aa14.26□□□□□ -0.13
SPIDR-205ENST00000518060 C4BP0C0L5 1744 aa14.26□□□□□ -0.13
SPIDR-205ENST00000518060 NPC1L1Q9UHC9 1359 aa14.25□□□□□ -0.13
SPIDR-205ENST00000518060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.25□□□□□ -0.13
SPIDR-205ENST00000518060 CFAP53Q96M91 514 aa14.24□□□□□ -0.13
SPIDR-205ENST00000518060 PTCD1O75127 700 aaKnown RBP14.23□□□□□ -0.13
SPIDR-205ENST00000518060 GPR162Q16538 588 aa14.23□□□□□ -0.13
SPIDR-205ENST00000518060 AKAP4Q5JQC9 854 aa14.23□□□□□ -0.13
SPIDR-205ENST00000518060 AMIGO3Q86WK7 504 aa14.23□□□□□ -0.13
SPIDR-205ENST00000518060 NFATC2IPQ8NCF5 419 aa14.23□□□□□ -0.13
SPIDR-205ENST00000518060 SSFA2P28290 1259 aa14.22□□□□□ -0.13
SPIDR-205ENST00000518060 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
SPIDR-205ENST00000518060 TAF1LQ8IZX4 1826 aa14.21□□□□□ -0.13
SPIDR-205ENST00000518060 NLGN2Q8NFZ4 835 aa14.21□□□□□ -0.13
SPIDR-205ENST00000518060 COL3A1P02461 1466 aaPredicted RBP14.2□□□□□ -0.14
SPIDR-205ENST00000518060 MTHFSDQ2M296 383 aaKnown RBP14.2□□□□□ -0.14
SPIDR-205ENST00000518060 RTCBQ9Y3I0 505 aaKnown RBP14.2□□□□□ -0.14
SPIDR-205ENST00000518060 RNMTO43148 476 aaKnown RBP14.19□□□□□ -0.14
SPIDR-205ENST00000518060 SLC4A9Q96Q91 983 aa14.19□□□□□ -0.14
SPIDR-205ENST00000518060 SLC52A2Q9HAB3 445 aa14.19□□□□□ -0.14
SPIDR-205ENST00000518060 LGR6Q9HBX8 967 aa14.19□□□□□ -0.14
SPIDR-205ENST00000518060 TRAPPC3LQ5T215 181 aa14.18□□□□□ -0.14
SPIDR-205ENST00000518060 NUDCQ9Y266 331 aa14.18□□□□□ -0.14
SPIDR-205ENST00000518060 U2AF1L5P0DN76 240 aaPredicted RBP14.17□□□□□ -0.14
SPIDR-205ENST00000518060 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
SPIDR-205ENST00000518060 U2AF1Q01081 240 aaKnown RBP eCLIP14.17□□□□□ -0.14
SPIDR-205ENST00000518060 GAS2L2Q8NHY3 880 aa14.17□□□□□ -0.14
SPIDR-205ENST00000518060 CNTNAP4Q9C0A0 1308 aa14.16□□□□□ -0.14
SPIDR-205ENST00000518060 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
SPIDR-205ENST00000518060 PRKAR2BP31323 418 aa14.16□□□□□ -0.14
SPIDR-205ENST00000518060 RFC4P35249 363 aa14.16□□□□□ -0.14
SPIDR-205ENST00000518060 SLC39A6Q13433 755 aa14.16□□□□□ -0.14
SPIDR-205ENST00000518060 MMP10P09238 476 aa14.15□□□□□ -0.14
SPIDR-205ENST00000518060 CRKLP46109 303 aaKnown RBP14.15□□□□□ -0.14
SPIDR-205ENST00000518060 TTC5Q8N0Z6 440 aa14.15□□□□□ -0.14
SPIDR-205ENST00000518060 WWC3Q9ULE0 1092 aa14.15□□□□□ -0.14
SPIDR-205ENST00000518060 COL24A1Q17RW2 1714 aa14.15□□□□□ -0.14
SPIDR-205ENST00000518060 MRC1P22897 1456 aa14.14□□□□□ -0.15
SPIDR-205ENST00000518060 GNAT3A8MTJ3 354 aa14.14□□□□□ -0.15
SPIDR-205ENST00000518060 ADRA2BP18089 450 aa14.14□□□□□ -0.15
SPIDR-205ENST00000518060 TEFQ10587 303 aa14.14□□□□□ -0.15
SPIDR-205ENST00000518060 RC3H1Q5TC82 1133 aaKnown RBP14.14□□□□□ -0.15
SPIDR-205ENST00000518060 DNAJC10Q8IXB1 793 aa14.14□□□□□ -0.15
SPIDR-205ENST00000518060 ARHGEF1Q92888 912 aaKnown RBP14.14□□□□□ -0.15
SPIDR-205ENST00000518060 CD2APQ9Y5K6 639 aa14.14□□□□□ -0.15
SPIDR-205ENST00000518060 SCN11AQ9UI33 1791 aa14.14□□□□□ -0.15
SPIDR-205ENST00000518060 RPS6KA4O75676 772 aa14.13□□□□□ -0.15
SPIDR-205ENST00000518060 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
SPIDR-205ENST00000518060 ZNF831Q5JPB2 1677 aa14.11□□□□□ -0.15
SPIDR-205ENST00000518060 COL5A3P25940 1745 aaPredicted RBP14.11□□□□□ -0.15
SPIDR-205ENST00000518060 NLGN1Q8N2Q7 840 aa14.11□□□□□ -0.15
SPIDR-205ENST00000518060 PHACTR3Q96KR7 559 aa14.11□□□□□ -0.15
SPIDR-205ENST00000518060 CCDC87Q9NVE4 849 aa14.11□□□□□ -0.15
SPIDR-205ENST00000518060 GRIN3BO60391 1043 aa14.1□□□□□ -0.15
SPIDR-205ENST00000518060 GYS1P13807 737 aa14.1□□□□□ -0.15
SPIDR-205ENST00000518060 YBX3P16989 372 aaKnown RBP eCLIP14.1□□□□□ -0.15
SPIDR-205ENST00000518060 RTF1Q92541 710 aaKnown RBP14.1□□□□□ -0.15
SPIDR-205ENST00000518060 SRP68Q9UHB9 627 aaKnown RBP14.1□□□□□ -0.15
SPIDR-205ENST00000518060 PARP3Q9Y6F1 533 aa14.1□□□□□ -0.15
SPIDR-205ENST00000518060 TJP1Q07157 1748 aa14.1□□□□□ -0.15
SPIDR-205ENST00000518060 NEFMP07197 916 aa14.09□□□□□ -0.15
SPIDR-205ENST00000518060 INTS5Q6P9B9 1019 aaKnown RBP14.09□□□□□ -0.15
SPIDR-205ENST00000518060 IL17REQ8NFR9 667 aa14.09□□□□□ -0.15
SPIDR-205ENST00000518060 KCPQ6ZWJ8 1503 aa14.09□□□□□ -0.15
SPIDR-205ENST00000518060 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.15
SPIDR-205ENST00000518060 ZPR1O75312 459 aa14.08□□□□□ -0.16
SPIDR-205ENST00000518060 ZNF330Q9Y3S2 320 aaPredicted RBP14.08□□□□□ -0.16
SPIDR-205ENST00000518060 USP42Q9H9J4 1324 aaKnown RBP14.08□□□□□ -0.16
SPIDR-205ENST00000518060 FCHSD2O94868 740 aa14.07□□□□□ -0.16
SPIDR-205ENST00000518060 STARD3NLO95772 234 aa14.07□□□□□ -0.16
SPIDR-205ENST00000518060 CYP19A1P11511 503 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-205ENST00000518060 CANXP27824 592 aaKnown RBP14.07□□□□□ -0.16
SPIDR-205ENST00000518060 MCM10Q7L590 875 aa14.07□□□□□ -0.16
SPIDR-205ENST00000518060 ZNF784Q8NCA9 323 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-205ENST00000518060 ZBTB1Q9Y2K1 713 aa14.07□□□□□ -0.16
SPIDR-205ENST00000518060 SOS1Q07889 1333 aaPredicted RBP14.07□□□□□ -0.16
SPIDR-205ENST00000518060 ADAMTS7Q9UKP4 1686 aa14.07□□□□□ -0.16
SPIDR-205ENST00000518060 BTBD11A6QL63 1104 aa14.06□□□□□ -0.16
SPIDR-205ENST00000518060 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
SPIDR-205ENST00000518060 FKBP8Q14318 412 aa14.06□□□□□ -0.16
SPIDR-205ENST00000518060 USPL1Q5W0Q7 1092 aa14.06□□□□□ -0.16
SPIDR-205ENST00000518060 ZNF790Q6PG37 636 aa14.06□□□□□ -0.16
SPIDR-205ENST00000518060 VSIG10Q8N0Z9 540 aa14.06□□□□□ -0.16
SPIDR-205ENST00000518060 ZNF496Q96IT1 587 aaPredicted RBP14.06□□□□□ -0.16
SPIDR-205ENST00000518060 COL15A1P39059 1388 aa14.06□□□□□ -0.16
SPIDR-205ENST00000518060 C4AP0C0L4 1744 aa14.05□□□□□ -0.16
SPIDR-205ENST00000518060 FMNL2Q96PY5 1086 aa14.05□□□□□ -0.16
SPIDR-205ENST00000518060 UTRNP46939 3433 aa14.05□□□□□ -0.16
SPIDR-205ENST00000518060 MYH14Q7Z406 1995 aaKnown RBP14.04□□□□□ -0.16
SPIDR-205ENST00000518060 DCTN1Q14203 1278 aa14.04□□□□□ -0.16
SPIDR-205ENST00000518060 NPM2Q86SE8 214 aaKnown RBP14.04□□□□□ -0.16
SPIDR-205ENST00000518060 MAPK8IP3Q9UPT6 1336 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms