RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 EIF4A1P60842 406 aaKnown RBP33.35■■■□□ 2.93
COL13A1-210ENST00000517713 CHD1LQ86WJ1 897 aa33.35■■■□□ 2.93
COL13A1-210ENST00000517713 CACNA1FO60840 1977 aa33.33■■■□□ 2.93
COL13A1-210ENST00000517713 CCT4P50991 539 aaKnown RBP33.33■■■□□ 2.93
COL13A1-210ENST00000517713 FLIIQ13045 1269 aa33.33■■■□□ 2.93
COL13A1-210ENST00000517713 BTBD11A6QL63 1104 aa33.33■■■□□ 2.93
COL13A1-210ENST00000517713 F6X3S4 739 aa33.33■■■□□ 2.93
COL13A1-210ENST00000517713 DDRGK1Q96HY6 314 aa33.33■■■□□ 2.93
COL13A1-210ENST00000517713 SLC4A10Q6U841 1118 aa33.32■■■□□ 2.92
COL13A1-210ENST00000517713 RAPGEF4Q8WZA2 1011 aa33.32■■■□□ 2.92
COL13A1-210ENST00000517713 CPDO75976 1380 aa33.31■■■□□ 2.92
COL13A1-210ENST00000517713 HDGFL1Q5TGJ6 251 aa33.31■■■□□ 2.92
COL13A1-210ENST00000517713 LNPKQ9C0E8 428 aa33.31■■■□□ 2.92
COL13A1-210ENST00000517713 CHRNA2Q15822 529 aa33.31■■■□□ 2.92
COL13A1-210ENST00000517713 ANKRD45Q5TZF3 282 aa33.3■■■□□ 2.92
COL13A1-210ENST00000517713 HOXB7P09629 217 aa33.29■■■□□ 2.92
COL13A1-210ENST00000517713 CSB-PGBD3P0DP91 1061 aa33.29■■■□□ 2.92
COL13A1-210ENST00000517713 FKBP5Q13451 457 aaPredicted RBP33.29■■■□□ 2.92
COL13A1-210ENST00000517713 MEIS3Q99687 375 aa33.29■■■□□ 2.92
COL13A1-210ENST00000517713 RPAP2Q8IXW5 612 aaPredicted RBP33.29■■■□□ 2.92
COL13A1-210ENST00000517713 ANKRD44Q8N8A2 993 aa33.29■■■□□ 2.92
COL13A1-210ENST00000517713 ATP10DQ9P241 1426 aa33.28■■■□□ 2.92
COL13A1-210ENST00000517713 KCNQ3O43525 872 aa33.28■■■□□ 2.92
COL13A1-210ENST00000517713 SEC24BO95487 1268 aa33.28■■■□□ 2.92
COL13A1-210ENST00000517713 SOS2Q07890 1332 aaPredicted RBP33.27■■■□□ 2.92
COL13A1-210ENST00000517713 TATP17735 454 aaPredicted RBP33.27■■■□□ 2.92
COL13A1-210ENST00000517713 CHMP4AQ9BY43 222 aa33.27■■■□□ 2.92
COL13A1-210ENST00000517713 ADAMTS7Q9UKP4 1686 aa33.25■■■□□ 2.91
COL13A1-210ENST00000517713 CEP85Q6P2H3 762 aa33.24■■■□□ 2.91
COL13A1-210ENST00000517713 DCTPP1Q9H773 170 aa33.24■■■□□ 2.91
COL13A1-210ENST00000517713 EIF2S2P20042 333 aaKnown RBP33.23■■■□□ 2.91
COL13A1-210ENST00000517713 SPG7Q9UQ90 795 aa33.23■■■□□ 2.91
COL13A1-210ENST00000517713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.22■■■□□ 2.91
COL13A1-210ENST00000517713 SIPA1L3O60292 1781 aaPredicted RBP33.22■■■□□ 2.91
COL13A1-210ENST00000517713 MEGF6O75095 1541 aa33.21■■■□□ 2.91
COL13A1-210ENST00000517713 PLEKHG2Q9H7P9 1386 aa33.2■■■□□ 2.91
COL13A1-210ENST00000517713 PXDNLA1KZ92 1463 aa33.19■■■□□ 2.9
COL13A1-210ENST00000517713 PHAXQ9H814 394 aaKnown RBP33.19■■■□□ 2.9
COL13A1-210ENST00000517713 N4BP2Q86UW6 1770 aaPredicted RBP33.17■■■□□ 2.9
COL13A1-210ENST00000517713 PHKG2P15735 406 aa33.17■■■□□ 2.9
COL13A1-210ENST00000517713 UPF2Q9HAU5 1272 aaKnown RBP33.16■■■□□ 2.9
COL13A1-210ENST00000517713 CHPF2Q9P2E5 772 aa33.16■■■□□ 2.9
COL13A1-210ENST00000517713 HEG1Q9ULI3 1381 aa33.15■■■□□ 2.9
COL13A1-210ENST00000517713 GNAI2P04899 355 aa33.15■■■□□ 2.9
COL13A1-210ENST00000517713 PRDM11Q9NQV5 511 aa33.15■■■□□ 2.9
COL13A1-210ENST00000517713 SCN11AQ9UI33 1791 aa33.15■■■□□ 2.9
COL13A1-210ENST00000517713 GNAI3P08754 354 aa33.14■■■□□ 2.9
COL13A1-210ENST00000517713 IFNL2Q8IZJ0 200 aa33.14■■■□□ 2.9
COL13A1-210ENST00000517713 GIGYF1O75420 1035 aaPredicted RBP33.14■■■□□ 2.9
COL13A1-210ENST00000517713 KDM6AO15550 1401 aaPredicted RBP33.14■■■□□ 2.9
COL13A1-210ENST00000517713 HMMRO75330 724 aa33.12■■■□□ 2.89
COL13A1-210ENST00000517713 SLC52A2Q9HAB3 445 aa33.12■■■□□ 2.89
COL13A1-210ENST00000517713 PKD1L3Q7Z443 1732 aa33.11■■■□□ 2.89
COL13A1-210ENST00000517713 BMP2KLQ5H9B9 411 aa33.11■■■□□ 2.89
COL13A1-210ENST00000517713 DBF4Q9UBU7 674 aaPredicted RBP33.1■■■□□ 2.89
COL13A1-210ENST00000517713 NHSL1Q5SYE7 1610 aa33.1■■■□□ 2.89
COL13A1-210ENST00000517713 WDR17Q8IZU2 1322 aa33.09■■■□□ 2.89
COL13A1-210ENST00000517713 ABCA3Q99758 1704 aa33.08■■■□□ 2.89
COL13A1-210ENST00000517713 DCAF5Q96JK2 942 aa33.07■■■□□ 2.88
COL13A1-210ENST00000517713 TBC1D32Q96NH3 1257 aa33.07■■■□□ 2.88
COL13A1-210ENST00000517713 CYP27B1O15528 508 aa33.06■■■□□ 2.88
COL13A1-210ENST00000517713 DAXXQ9UER7 740 aaPredicted RBP33.06■■■□□ 2.88
COL13A1-210ENST00000517713 ZNF790Q6PG37 636 aa33.06■■■□□ 2.88
COL13A1-210ENST00000517713 NFATC2IPQ8NCF5 419 aa33.06■■■□□ 2.88
COL13A1-210ENST00000517713 ANXA1P04083 346 aa33.05■■■□□ 2.88
COL13A1-210ENST00000517713 SRCIN1Q9C0H9 1055 aa33.05■■■□□ 2.88
COL13A1-210ENST00000517713 USP44Q9H0E7 712 aa33.05■■■□□ 2.88
COL13A1-210ENST00000517713 HSP90AB1P08238 724 aaKnown RBP33.04■■■□□ 2.88
COL13A1-210ENST00000517713 TOM1L2Q6ZVM7 507 aa33.04■■■□□ 2.88
COL13A1-210ENST00000517713 PRAMEF22A3QJZ6 481 aa33.04■■■□□ 2.88
COL13A1-210ENST00000517713 DNAAF4Q8WXU2 420 aa33.04■■■□□ 2.88
COL13A1-210ENST00000517713 COL5A2P05997 1499 aaPredicted RBP33.04■■■□□ 2.88
COL13A1-210ENST00000517713 PI4KAP2A4QPH2 592 aa33.03■■■□□ 2.88
COL13A1-210ENST00000517713 PLEKHM2Q8IWE5 1019 aa33.03■■■□□ 2.88
COL13A1-210ENST00000517713 PI4KAP1Q8N8J0 262 aa33.03■■■□□ 2.88
COL13A1-210ENST00000517713 SLC39A6Q13433 755 aa33.02■■■□□ 2.88
COL13A1-210ENST00000517713 MRC1P22897 1456 aa33.01■■■□□ 2.88
COL13A1-210ENST00000517713 UBTFL1P0CB47 393 aaPredicted RBP33.01■■■□□ 2.88
COL13A1-210ENST00000517713 ATP8B2P98198 1209 aa33.01■■■□□ 2.88
COL13A1-210ENST00000517713 PARP4Q9UKK3 1724 aaKnown RBP33.01■■■□□ 2.87
COL13A1-210ENST00000517713 LRRFIP2Q9Y608 721 aaKnown RBP33.01■■■□□ 2.87
COL13A1-210ENST00000517713 MFAP1P55081 439 aaKnown RBP33■■■□□ 2.87
COL13A1-210ENST00000517713 BEND3Q5T5X7 828 aa33■■■□□ 2.87
COL13A1-210ENST00000517713 ADCY9O60503 1353 aa32.99■■■□□ 2.87
COL13A1-210ENST00000517713 SLC4A3P48751 1232 aa32.99■■■□□ 2.87
COL13A1-210ENST00000517713 C16orf71Q8IYS4 520 aaPredicted RBP32.99■■■□□ 2.87
COL13A1-210ENST00000517713 APBB1O00213 710 aa32.99■■■□□ 2.87
COL13A1-210ENST00000517713 PROSER3Q2NL68 480 aa32.99■■■□□ 2.87
COL13A1-210ENST00000517713 HYPKQ9NX55 129 aa32.99■■■□□ 2.87
COL13A1-210ENST00000517713 SMARCA5O60264 1052 aaPredicted RBP32.97■■■□□ 2.87
COL13A1-210ENST00000517713 BCL11AQ9H165 835 aa32.96■■■□□ 2.87
COL13A1-210ENST00000517713 PNMA6EA0A0J9YXQ4 647 aa32.95■■■□□ 2.87
COL13A1-210ENST00000517713 CARD10Q9BWT7 1032 aa32.95■■■□□ 2.87
COL13A1-210ENST00000517713 C22orf23Q9BZE7 217 aa32.95■■■□□ 2.87
COL13A1-210ENST00000517713 DDX21Q9NR30 783 aaKnown RBP eCLIP32.95■■■□□ 2.87
COL13A1-210ENST00000517713 ZCRB1Q8TBF4 217 aaKnown RBP32.95■■■□□ 2.87
COL13A1-210ENST00000517713 C5P01031 1676 aa32.94■■■□□ 2.86
COL13A1-210ENST00000517713 CABP4P57796 275 aa32.94■■■□□ 2.86
COL13A1-210ENST00000517713 KSR2Q6VAB6 950 aa32.94■■■□□ 2.86
COL13A1-210ENST00000517713 TTC5Q8N0Z6 440 aa32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms