RNA–Protein interactions for RNA: ENST00000517310.5

EFCAB13-202, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,477 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-202ENST00000517310 RGS17Q9UGC6 210 aaPredicted RBP28.43■■■□□ 2.14
EFCAB13-202ENST00000517310 ERVV-2B6SEH9 535 aa28.42■■■□□ 2.14
EFCAB13-202ENST00000517310 SEPT12Q8IYM1 358 aa28.41■■■□□ 2.14
EFCAB13-202ENST00000517310 TSPYL4Q9UJ04 414 aa28.4■■■□□ 2.14
EFCAB13-202ENST00000517310 KDM3BQ7LBC6 1761 aa28.4■■■□□ 2.14
EFCAB13-202ENST00000517310 MIS18AQ9NYP9 233 aa28.39■■■□□ 2.13
EFCAB13-202ENST00000517310 CABP4P57796 275 aa28.38■■■□□ 2.13
EFCAB13-202ENST00000517310 NFATC2IPQ8NCF5 419 aa28.38■■■□□ 2.13
EFCAB13-202ENST00000517310 BTBD11A6QL63 1104 aa28.37■■■□□ 2.13
EFCAB13-202ENST00000517310 DOT1LQ8TEK3 1739 aa28.36■■■□□ 2.13
EFCAB13-202ENST00000517310 ITGB4P16144 1822 aa28.36■■■□□ 2.13
EFCAB13-202ENST00000517310 EXOSC9Q06265 439 aaKnown RBP28.35■■■□□ 2.13
EFCAB13-202ENST00000517310 RXRBP28702 533 aa28.34■■■□□ 2.13
EFCAB13-202ENST00000517310 BRWD3Q6RI45 1802 aa28.33■■■□□ 2.13
EFCAB13-202ENST00000517310 POTEAQ6S8J7 498 aa28.33■■■□□ 2.13
EFCAB13-202ENST00000517310 KAT6BQ8WYB5 2073 aa28.32■■■□□ 2.12
EFCAB13-202ENST00000517310 CT47B1P0C2W7 299 aaPredicted RBP28.32■■■□□ 2.12
EFCAB13-202ENST00000517310 BCL9O00512 1426 aa28.31■■■□□ 2.12
EFCAB13-202ENST00000517310 TMOD3Q9NYL9 352 aa28.31■■■□□ 2.12
EFCAB13-202ENST00000517310 PAPPAQ13219 1627 aa28.3■■■□□ 2.12
EFCAB13-202ENST00000517310 KCNQ3O43525 872 aa28.28■■■□□ 2.12
EFCAB13-202ENST00000517310 ZNF790Q6PG37 636 aa28.28■■■□□ 2.12
EFCAB13-202ENST00000517310 C8orf58Q8NAV2 365 aa28.28■■■□□ 2.12
EFCAB13-202ENST00000517310 EIF4A1P60842 406 aaKnown RBP28.27■■■□□ 2.12
EFCAB13-202ENST00000517310 RCAN3Q9UKA8 241 aa28.27■■■□□ 2.12
EFCAB13-202ENST00000517310 PRIM1P49642 420 aaKnown RBP28.27■■■□□ 2.12
EFCAB13-202ENST00000517310 SLC39A6Q13433 755 aa28.27■■■□□ 2.12
EFCAB13-202ENST00000517310 TSPYL6Q8N831 410 aa28.27■■■□□ 2.12
EFCAB13-202ENST00000517310 PIGBQ92521 554 aa28.27■■■□□ 2.12
EFCAB13-202ENST00000517310 KRT27Q7Z3Y8 459 aa28.26■■■□□ 2.11
EFCAB13-202ENST00000517310 RGS12O14924 1447 aa28.25■■■□□ 2.11
EFCAB13-202ENST00000517310 KRT24Q2M2I5 525 aa28.25■■■□□ 2.11
EFCAB13-202ENST00000517310 TWISTNBQ3B726 338 aaPredicted RBP28.25■■■□□ 2.11
EFCAB13-202ENST00000517310 ACSBG1Q96GR2 724 aa28.25■■■□□ 2.11
EFCAB13-202ENST00000517310 VAMP4O75379 141 aa28.24■■■□□ 2.11
EFCAB13-202ENST00000517310 TTC5Q8N0Z6 440 aa28.24■■■□□ 2.11
EFCAB13-202ENST00000517310 UBR2Q8IWV8 1755 aa28.24■■■□□ 2.11
EFCAB13-202ENST00000517310 HEG1Q9ULI3 1381 aa28.24■■■□□ 2.11
EFCAB13-202ENST00000517310 ZNF428Q96B54 188 aa28.23■■■□□ 2.11
EFCAB13-202ENST00000517310 SYTL4Q96C24 671 aaPredicted RBP28.23■■■□□ 2.11
EFCAB13-202ENST00000517310 SOS1Q07889 1333 aaPredicted RBP28.23■■■□□ 2.11
EFCAB13-202ENST00000517310 NHSQ6T4R5 1651 aa28.22■■■□□ 2.11
EFCAB13-202ENST00000517310 SBF2Q86WG5 1849 aa28.22■■■□□ 2.11
EFCAB13-202ENST00000517310 ELL2O00472 640 aaPredicted RBP28.21■■■□□ 2.11
EFCAB13-202ENST00000517310 FAM182BQ5T319 152 aa28.21■■■□□ 2.11
EFCAB13-202ENST00000517310 KCPQ6ZWJ8 1503 aa28.2■■■□□ 2.1
EFCAB13-202ENST00000517310 HOXB7P09629 217 aa28.2■■■□□ 2.1
EFCAB13-202ENST00000517310 RARSP54136 660 aaKnown RBP28.2■■■□□ 2.1
EFCAB13-202ENST00000517310 FMNL2Q96PY5 1086 aa28.19■■■□□ 2.1
EFCAB13-202ENST00000517310 ATG3Q9NT62 314 aa28.19■■■□□ 2.1
EFCAB13-202ENST00000517310 KCNQ2O43526 872 aa28.18■■■□□ 2.1
EFCAB13-202ENST00000517310 ZNF496Q96IT1 587 aaPredicted RBP28.18■■■□□ 2.1
EFCAB13-202ENST00000517310 ASAP1Q9ULH1 1129 aa28.18■■■□□ 2.1
EFCAB13-202ENST00000517310 FAM196AQ6ZSG2 479 aa28.17■■■□□ 2.1
EFCAB13-202ENST00000517310 GIGYF1O75420 1035 aaPredicted RBP28.16■■■□□ 2.1
EFCAB13-202ENST00000517310 ALDH1L2Q3SY69 923 aa28.16■■■□□ 2.1
EFCAB13-202ENST00000517310 SUPT16HQ9Y5B9 1047 aaKnown RBP28.15■■■□□ 2.1
EFCAB13-202ENST00000517310 SSH1Q8WYL5 1049 aa28.14■■■□□ 2.09
EFCAB13-202ENST00000517310 C5P01031 1676 aa28.14■■■□□ 2.09
EFCAB13-202ENST00000517310 RNF123Q5XPI4 1314 aa28.13■■■□□ 2.09
EFCAB13-202ENST00000517310 BTAF1O14981 1849 aa28.13■■■□□ 2.09
EFCAB13-202ENST00000517310 BCAR3O75815 825 aa28.12■■■□□ 2.09
EFCAB13-202ENST00000517310 SNRPA1P09661 255 aaKnown RBP28.12■■■□□ 2.09
EFCAB13-202ENST00000517310 CHMP4AQ9BY43 222 aa28.12■■■□□ 2.09
EFCAB13-202ENST00000517310 LAMB4A4D0S4 1761 aa28.1■■■□□ 2.09
EFCAB13-202ENST00000517310 PTCD1O75127 700 aaKnown RBP28.1■■■□□ 2.09
EFCAB13-202ENST00000517310 VSIG10Q8N0Z9 540 aa28.1■■■□□ 2.09
EFCAB13-202ENST00000517310 SMARCC1Q92922 1105 aaPredicted RBP28.1■■■□□ 2.09
EFCAB13-202ENST00000517310 SMC4Q9NTJ3 1288 aa28.1■■■□□ 2.09
EFCAB13-202ENST00000517310 PRAMEF22A3QJZ6 481 aa28.09■■■□□ 2.09
EFCAB13-202ENST00000517310 BRPF1P55201 1214 aaPredicted RBP28.09■■■□□ 2.09
EFCAB13-202ENST00000517310 HDGFL1Q5TGJ6 251 aa28.09■■■□□ 2.09
EFCAB13-202ENST00000517310 CCDC30Q5VVM6 783 aa28.09■■■□□ 2.09
EFCAB13-202ENST00000517310 PTF1AQ7RTS3 328 aa28.09■■■□□ 2.09
EFCAB13-202ENST00000517310 BCL2L13Q9BXK5 485 aa28.09■■■□□ 2.09
EFCAB13-202ENST00000517310 BCL11BQ9C0K0 894 aaPredicted RBP28.09■■■□□ 2.09
EFCAB13-202ENST00000517310 CACNA1FO60840 1977 aa28.09■■■□□ 2.09
EFCAB13-202ENST00000517310 MRPL50Q8N5N7 158 aaKnown RBP28.08■■■□□ 2.09
EFCAB13-202ENST00000517310 PALLDQ8WX93 1383 aa28.07■■■□□ 2.08
EFCAB13-202ENST00000517310 RRP1P56182 461 aaKnown RBP28.07■■■□□ 2.08
EFCAB13-202ENST00000517310 RBM42Q9BTD8 480 aaKnown RBP28.07■■■□□ 2.08
EFCAB13-202ENST00000517310 EIF2S2P20042 333 aaKnown RBP28.06■■■□□ 2.08
EFCAB13-202ENST00000517310 TCERG1O14776 1098 aaKnown RBP28.05■■■□□ 2.08
EFCAB13-202ENST00000517310 CICQ96RK0 1608 aaPredicted RBP28.04■■■□□ 2.08
EFCAB13-202ENST00000517310 SLC4A9Q96Q91 983 aa28.04■■■□□ 2.08
EFCAB13-202ENST00000517310 STK31Q9BXU1 1019 aa28.04■■■□□ 2.08
EFCAB13-202ENST00000517310 USP16Q9Y5T5 823 aa28.04■■■□□ 2.08
EFCAB13-202ENST00000517310 ZNF831Q5JPB2 1677 aa28.04■■■□□ 2.08
EFCAB13-202ENST00000517310 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.03■■■□□ 2.08
EFCAB13-202ENST00000517310 NECTIN2Q92692 538 aa28.03■■■□□ 2.08
EFCAB13-202ENST00000517310 TEX13AQ9BXU3 409 aaPredicted RBP28.03■■■□□ 2.08
EFCAB13-202ENST00000517310 TJP1Q07157 1748 aa28.03■■■□□ 2.08
EFCAB13-202ENST00000517310 KIF16BQ96L93 1317 aa28.02■■■□□ 2.08
EFCAB13-202ENST00000517310 LOC102724428A0A0B4J2F2 783 aa28.02■■■□□ 2.08
EFCAB13-202ENST00000517310 TRIM37O94972 964 aa28.02■■■□□ 2.08
EFCAB13-202ENST00000517310 SIK1P57059 783 aa28.02■■■□□ 2.08
EFCAB13-202ENST00000517310 EP400Q96L91 3159 aa28.01■■■□□ 2.07
EFCAB13-202ENST00000517310 SLC4A2P04920 1241 aa28.01■■■□□ 2.07
EFCAB13-202ENST00000517310 LY75O60449 1722 aa28■■■□□ 2.07
EFCAB13-202ENST00000517310 DNAJC10Q8IXB1 793 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms