RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 CTC1Q2NKJ3 1217 aa8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 XAGE2Q96GT9 111 aa8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 TSEN34Q9BSV6 310 aaKnown RBP8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 TRAIPQ9BWF2 469 aa8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 IRX2Q9BZI1 471 aaPredicted RBP8.74□□□□□ -1.01
RNU6-1028P-201ENST00000517164 M0R2N6 131 aa8.73□□□□□ -1.01
RNU6-1028P-201ENST00000517164 BACH1O14867 736 aa8.73□□□□□ -1.01
RNU6-1028P-201ENST00000517164 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
RNU6-1028P-201ENST00000517164 TNS4Q8IZW8 715 aa8.73□□□□□ -1.01
RNU6-1028P-201ENST00000517164 HINFPQ9BQA5 517 aa8.73□□□□□ -1.01
RNU6-1028P-201ENST00000517164 ESYT1Q9BSJ8 1104 aa8.73□□□□□ -1.01
RNU6-1028P-201ENST00000517164 HRH3Q9Y5N1 445 aa8.73□□□□□ -1.01
RNU6-1028P-201ENST00000517164 AXIN1O15169 862 aa8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 UPP2O95045 317 aa8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 EPHA4P54764 986 aa8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 PDE4CQ08493 712 aa8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 C6orf118Q5T5N4 469 aa8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 MRPL14Q6P1L8 145 aaKnown RBP8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 CRIPAKQ8N1N5 446 aa8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 CLP1Q92989 425 aaKnown RBP8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 SLC4A9Q96Q91 983 aa8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 INSM2Q96T92 566 aaPredicted RBP8.72□□□□□ -1.01
RNU6-1028P-201ENST00000517164 ST8SIA5O15466 376 aa8.71□□□□□ -1.02
RNU6-1028P-201ENST00000517164 SPINT1O43278 529 aa8.71□□□□□ -1.02
RNU6-1028P-201ENST00000517164 PRMT3O60678 531 aa8.71□□□□□ -1.02
RNU6-1028P-201ENST00000517164 BMP2P12643 396 aa8.71□□□□□ -1.02
RNU6-1028P-201ENST00000517164 TLR1Q15399 786 aa8.71□□□□□ -1.02
RNU6-1028P-201ENST00000517164 TRIM46Q7Z4K8 759 aa8.71□□□□□ -1.02
RNU6-1028P-201ENST00000517164 NLRP3Q96P20 1036 aa8.71□□□□□ -1.02
RNU6-1028P-201ENST00000517164 PURBQ96QR8 312 aaKnown RBP8.71□□□□□ -1.02
RNU6-1028P-201ENST00000517164 A6NJY4 79 aa8.7□□□□□ -1.02
RNU6-1028P-201ENST00000517164 SMTNP53814 917 aa8.7□□□□□ -1.02
RNU6-1028P-201ENST00000517164 CENPCQ03188 943 aa8.7□□□□□ -1.02
RNU6-1028P-201ENST00000517164 MTFR1Q15390 333 aa8.7□□□□□ -1.02
RNU6-1028P-201ENST00000517164 PRIMPOLQ96LW4 560 aa8.7□□□□□ -1.02
RNU6-1028P-201ENST00000517164 FHDC1Q9C0D6 1143 aaPredicted RBP8.7□□□□□ -1.02
RNU6-1028P-201ENST00000517164 AAASQ9NRG9 546 aa8.7□□□□□ -1.02
RNU6-1028P-201ENST00000517164 CTSOP43234 321 aaPredicted RBP8.69□□□□□ -1.02
RNU6-1028P-201ENST00000517164 OCLNQ16625 522 aa8.69□□□□□ -1.02
RNU6-1028P-201ENST00000517164 GAS2L2Q8NHY3 880 aa8.69□□□□□ -1.02
RNU6-1028P-201ENST00000517164 TSPAN10Q9H1Z9 355 aaPredicted RBP8.69□□□□□ -1.02
RNU6-1028P-201ENST00000517164 POLMQ9NP87 494 aaPredicted RBP8.69□□□□□ -1.02
RNU6-1028P-201ENST00000517164 SCHIP1Q9P0W5 487 aaPredicted RBP8.69□□□□□ -1.02
RNU6-1028P-201ENST00000517164 USP3Q9Y6I4 520 aa8.69□□□□□ -1.02
RNU6-1028P-201ENST00000517164 ATP2B4P23634 1241 aa8.68□□□□□ -1.02
RNU6-1028P-201ENST00000517164 FOXK2Q01167 660 aa8.68□□□□□ -1.02
RNU6-1028P-201ENST00000517164 TBCELQ5QJ74 424 aa8.68□□□□□ -1.02
RNU6-1028P-201ENST00000517164 FOXD4L5Q5VV16 416 aaPredicted RBP8.68□□□□□ -1.02
RNU6-1028P-201ENST00000517164 WEE1P30291 646 aa8.67□□□□□ -1.02
RNU6-1028P-201ENST00000517164 SCARF1Q14162 830 aa8.67□□□□□ -1.02
RNU6-1028P-201ENST00000517164 PHLDB3Q6NSJ2 640 aa8.67□□□□□ -1.02
RNU6-1028P-201ENST00000517164 SLC9A9Q8IVB4 645 aa8.67□□□□□ -1.02
RNU6-1028P-201ENST00000517164 ZFP42Q96MM3 310 aa8.67□□□□□ -1.02
RNU6-1028P-201ENST00000517164 DACH1Q9UI36 760 aa8.67□□□□□ -1.02
RNU6-1028P-201ENST00000517164 IQSEC3Q9UPP2 1182 aaPredicted RBP8.67□□□□□ -1.02
RNU6-1028P-201ENST00000517164 C21orf2O43822 256 aa8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 SSFA2P28290 1259 aa8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 GPC1P35052 558 aa8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 RNF144AP50876 292 aaPredicted RBP8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 SCG3Q8WXD2 468 aaKnown RBP8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 ZSCAN10Q96SZ4 725 aaPredicted RBP8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 GRIP2Q9C0E4 1043 aa8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 ATP13A2Q9NQ11 1180 aa8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 CXXC1Q9P0U4 656 aaPredicted RBP8.66□□□□□ -1.02
RNU6-1028P-201ENST00000517164 ATAD2Q6PL18 1390 aa8.65□□□□□ -1.02
RNU6-1028P-201ENST00000517164 CDK2AP1O14519 115 aa8.65□□□□□ -1.02
RNU6-1028P-201ENST00000517164 BRD1O95696 1058 aa8.65□□□□□ -1.02
RNU6-1028P-201ENST00000517164 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
RNU6-1028P-201ENST00000517164 TTLL8A6PVC2 850 aa8.64□□□□□ -1.03
RNU6-1028P-201ENST00000517164 IGFBP4P22692 258 aa8.64□□□□□ -1.03
RNU6-1028P-201ENST00000517164 SCNN1AP37088 669 aa8.64□□□□□ -1.03
RNU6-1028P-201ENST00000517164 FKBP5Q13451 457 aaPredicted RBP8.64□□□□□ -1.03
RNU6-1028P-201ENST00000517164 PPARGC1BQ86YN6 1023 aaKnown RBP8.64□□□□□ -1.03
RNU6-1028P-201ENST00000517164 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
RNU6-1028P-201ENST00000517164 ZNF295-AS1Q8N0V1 137 aa8.64□□□□□ -1.03
RNU6-1028P-201ENST00000517164 CHMP7Q8WUX9 453 aaPredicted RBP8.64□□□□□ -1.03
RNU6-1028P-201ENST00000517164 SOS2Q07890 1332 aaPredicted RBP8.63□□□□□ -1.03
RNU6-1028P-201ENST00000517164 PPP1R12BO60237 982 aaPredicted RBP8.63□□□□□ -1.03
RNU6-1028P-201ENST00000517164 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
RNU6-1028P-201ENST00000517164 TMEM214Q6NUQ4 689 aaKnown RBP8.63□□□□□ -1.03
RNU6-1028P-201ENST00000517164 Q6ZNB5 142 aa8.63□□□□□ -1.03
RNU6-1028P-201ENST00000517164 FIGNL2A6NMB9 653 aa8.62□□□□□ -1.03
RNU6-1028P-201ENST00000517164 PRICKLE2Q7Z3G6 844 aa8.62□□□□□ -1.03
RNU6-1028P-201ENST00000517164 NBPF15Q8N660 670 aa8.62□□□□□ -1.03
RNU6-1028P-201ENST00000517164 LCE2BO14633 110 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 PSMA6P60900 246 aaKnown RBP8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 SH3PXD2AQ5TCZ1 1133 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 CAPN12Q6ZSI9 719 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 LYSMD3Q7Z3D4 306 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 RHBDD1Q8TEB9 315 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 ZDHHC1Q8WTX9 485 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 MKNK1Q9BUB5 465 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 CABP1Q9NZU7 370 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 DNMT3LQ9UJW3 386 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
RNU6-1028P-201ENST00000517164 FOXO3O43524 673 aa8.6□□□□□ -1.03
RNU6-1028P-201ENST00000517164 GTF2E1P29083 439 aaPredicted RBP8.6□□□□□ -1.03
RNU6-1028P-201ENST00000517164 C4orf17Q53FE4 359 aa8.6□□□□□ -1.03
RNU6-1028P-201ENST00000517164 GNASQ5JWF2 1037 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms