RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 PIGBQ92521 554 aa7.07□□□□□ -1.28
SCARNA16.4-201ENST00000516956 FMNL2Q96PY5 1086 aa7.07□□□□□ -1.28
SCARNA16.4-201ENST00000516956 THUMPD2Q9BTF0 503 aaKnown RBP7.07□□□□□ -1.28
SCARNA16.4-201ENST00000516956 BABAM1Q9NWV8 329 aa7.07□□□□□ -1.28
SCARNA16.4-201ENST00000516956 BRWD3Q6RI45 1802 aa7.06□□□□□ -1.28
SCARNA16.4-201ENST00000516956 NBPF14Q5TI25 921 aa7.06□□□□□ -1.28
SCARNA16.4-201ENST00000516956 ILDR2Q71H61 639 aa7.06□□□□□ -1.28
SCARNA16.4-201ENST00000516956 WWC1Q8IX03 1113 aa7.06□□□□□ -1.28
SCARNA16.4-201ENST00000516956 TEX13AQ9BXU3 409 aaPredicted RBP7.06□□□□□ -1.28
SCARNA16.4-201ENST00000516956 IFT57Q9NWB7 429 aa7.06□□□□□ -1.28
SCARNA16.4-201ENST00000516956 TRIM35Q9UPQ4 493 aa7.06□□□□□ -1.28
SCARNA16.4-201ENST00000516956 BCL9O00512 1426 aa7.06□□□□□ -1.28
SCARNA16.4-201ENST00000516956 IL16Q14005 1332 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 KDM6AO15550 1401 aaPredicted RBP7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 E9PSI1 815 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 STARD3NLO95772 234 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 ATP6V1AP38606 617 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 SLC39A6Q13433 755 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 SLC27A3Q5K4L6 730 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 ZNF790Q6PG37 636 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 CFAP44Q96MT7 982 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 MIS18AQ9NYP9 233 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 CCNL1Q9UK58 526 aaPredicted RBP7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 ASAP1Q9ULH1 1129 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 KAT6BQ8WYB5 2073 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 PALLDQ8WX93 1383 aa7.05□□□□□ -1.28
SCARNA16.4-201ENST00000516956 LOC102724428A0A0B4J2F2 783 aa7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 PLSCR1O15162 318 aa7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 SNRPA1P09661 255 aaKnown RBP7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 SIK1P57059 783 aa7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 EN1Q05925 392 aaPredicted RBP7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 UPF1Q92900 1129 aaKnown RBP eCLIP7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 ATG3Q9NT62 314 aa7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 STK32BQ9NY57 414 aa7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 CEMIPQ8WUJ3 1361 aa7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 DOT1LQ8TEK3 1739 aa7.04□□□□□ -1.28
SCARNA16.4-201ENST00000516956 CHL1O00533 1208 aa7.03□□□□□ -1.28
SCARNA16.4-201ENST00000516956 MSH5O43196 834 aa7.03□□□□□ -1.28
SCARNA16.4-201ENST00000516956 TXNRD1Q16881 649 aa7.03□□□□□ -1.28
SCARNA16.4-201ENST00000516956 AK7Q96M32 723 aa7.03□□□□□ -1.28
SCARNA16.4-201ENST00000516956 ARXQ96QS3 562 aa7.03□□□□□ -1.28
SCARNA16.4-201ENST00000516956 NHSQ6T4R5 1651 aa7.03□□□□□ -1.28
SCARNA16.4-201ENST00000516956 ZBED9Q6R2W3 1325 aa7.02□□□□□ -1.28
SCARNA16.4-201ENST00000516956 SHANK3Q9BYB0 1731 aa7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 SOCS7O14512 581 aa7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 EIF2S2P20042 333 aaKnown RBP7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 EZH2Q15910 746 aaKnown RBP7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 PTF1AQ7RTS3 328 aa7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 DEFB132Q7Z7B7 95 aa7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 VSIG10Q8N0Z9 540 aa7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ZNF496Q96IT1 587 aaPredicted RBP7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 STK31Q9BXU1 1019 aa7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 MBIPQ9NS73 344 aa7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ZNF330Q9Y3S2 320 aaPredicted RBP7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 SCN11AQ9UI33 1791 aa7.02□□□□□ -1.29
SCARNA16.4-201ENST00000516956 HEG1Q9ULI3 1381 aa7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ELL2O00472 640 aaPredicted RBP7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 EIF4A1P60842 406 aaKnown RBP7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 HDGFL1Q5TGJ6 251 aa7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 DUSP27Q5VZP5 1158 aa7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 DNAJC10Q8IXB1 793 aa7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 FLAD1Q8NFF5 587 aa7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 TSR2Q969E8 191 aaKnown RBP7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 TFCP2L1Q9NZI6 479 aa7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 SOS1Q07889 1333 aaPredicted RBP7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 FANCIQ9NVI1 1328 aa7.01□□□□□ -1.29
SCARNA16.4-201ENST00000516956 MRC1P22897 1456 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 DLG5Q8TDM6 1919 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 A0A087WZG4 1122 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 GNPATO15228 680 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 KCNQ3O43525 872 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 HOXB7P09629 217 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ZNF853P0CG23 659 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CANXP27824 592 aaKnown RBP7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 EXOSC9Q06265 439 aaKnown RBP7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 SLFN5Q08AF3 891 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 TWISTNBQ3B726 338 aaPredicted RBP7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CCDC30Q5VVM6 783 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 NECTIN2Q92692 538 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CAMKK2Q96RR4 588 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CCDC87Q9NVE4 849 aa7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 RTCBQ9Y3I0 505 aaKnown RBP7□□□□□ -1.29
SCARNA16.4-201ENST00000516956 BTAF1O14981 1849 aa6.99□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ITGB4P16144 1822 aa6.99□□□□□ -1.29
SCARNA16.4-201ENST00000516956 TOGARAM1Q9Y4F4 1720 aa6.99□□□□□ -1.29
SCARNA16.4-201ENST00000516956 GIGYF1O75420 1035 aaPredicted RBP6.99□□□□□ -1.29
SCARNA16.4-201ENST00000516956 KCNQ4P56696 695 aa6.99□□□□□ -1.29
SCARNA16.4-201ENST00000516956 TRAPPC3LQ5T215 181 aa6.99□□□□□ -1.29
SCARNA16.4-201ENST00000516956 RC3H1Q5TC82 1133 aaKnown RBP6.99□□□□□ -1.29
SCARNA16.4-201ENST00000516956 KIF6Q6ZMV9 814 aa6.99□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ADAMTS7Q9UKP4 1686 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ZPR1O75312 459 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 PHF14O94880 888 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 DDX58O95786 925 aaKnown RBP6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CT47B1P0C2W7 299 aaPredicted RBP6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CYP19A1P11511 503 aaPredicted RBP6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 MYL6BP14649 208 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 RFC4P35249 363 aa6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 CRKLP46109 303 aaKnown RBP6.98□□□□□ -1.29
SCARNA16.4-201ENST00000516956 ITPK1Q13572 414 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms